RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 KDM6BO15054 1643 aa26.73■■□□□ 1.87
SNAPC3-207ENST00000610884 ZCCHC11Q5TAX3 1644 aaKnown RBP26.73■■□□□ 1.87
SNAPC3-207ENST00000610884 CDC42BPAQ5VT25 1732 aa26.72■■□□□ 1.87
SNAPC3-207ENST00000610884 ADCY10Q96PN6 1610 aa26.72■■□□□ 1.87
SNAPC3-207ENST00000610884 CYB5RLQ6IPT4 315 aa26.7■■□□□ 1.86
SNAPC3-207ENST00000610884 FOXD1Q16676 465 aa26.7■■□□□ 1.86
SNAPC3-207ENST00000610884 MAPKBP1O60336 1514 aa26.69■■□□□ 1.86
SNAPC3-207ENST00000610884 TTC37Q6PGP7 1564 aa26.68■■□□□ 1.86
SNAPC3-207ENST00000610884 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.66■■□□□ 1.86
SNAPC3-207ENST00000610884 KDM5BQ9UGL1 1544 aa26.66■■□□□ 1.86
SNAPC3-207ENST00000610884 ITSN2Q9NZM3 1697 aa26.63■■□□□ 1.85
SNAPC3-207ENST00000610884 UHRF1BP1LA0JNW5 1464 aa26.62■■□□□ 1.85
SNAPC3-207ENST00000610884 DNMT1P26358 1616 aaKnown RBP26.61■■□□□ 1.85
SNAPC3-207ENST00000610884 CDC42BPBQ9Y5S2 1711 aa26.6■■□□□ 1.85
SNAPC3-207ENST00000610884 ARHGAP5Q13017 1502 aa26.59■■□□□ 1.85
SNAPC3-207ENST00000610884 NPM1P06748 294 aaKnown RBP eCLIP26.58■■□□□ 1.85
SNAPC3-207ENST00000610884 TSPY4P0CV99 314 aa26.57■■□□□ 1.84
SNAPC3-207ENST00000610884 TSPY10P0CW01 314 aa26.57■■□□□ 1.84
SNAPC3-207ENST00000610884 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
SNAPC3-207ENST00000610884 AKNAQ7Z591 1439 aa26.55■■□□□ 1.84
SNAPC3-207ENST00000610884 CLSPNQ9HAW4 1339 aa26.55■■□□□ 1.84
SNAPC3-207ENST00000610884 SAMD9LQ8IVG5 1584 aa26.54■■□□□ 1.84
SNAPC3-207ENST00000610884 NCOA1Q15788 1441 aa26.54■■□□□ 1.84
SNAPC3-207ENST00000610884 ASXL2Q76L83 1435 aa26.53■■□□□ 1.84
SNAPC3-207ENST00000610884 MPHOSPH9Q99550 1183 aa26.5■■□□□ 1.83
SNAPC3-207ENST00000610884 MBD5Q9P267 1494 aa26.5■■□□□ 1.83
SNAPC3-207ENST00000610884 SYCP2Q9BX26 1530 aa26.49■■□□□ 1.83
SNAPC3-207ENST00000610884 PREX2Q70Z35 1606 aa26.49■■□□□ 1.83
SNAPC3-207ENST00000610884 AFAP1Q8N556 730 aa26.48■■□□□ 1.83
SNAPC3-207ENST00000610884 WDR7Q9Y4E6 1490 aa26.48■■□□□ 1.83
SNAPC3-207ENST00000610884 C9orf84Q5VXU9 1444 aa26.48■■□□□ 1.83
SNAPC3-207ENST00000610884 ROCK1Q13464 1354 aa26.47■■□□□ 1.83
SNAPC3-207ENST00000610884 ARHGEF12Q9NZN5 1544 aa26.46■■□□□ 1.83
SNAPC3-207ENST00000610884 GCC2Q8IWJ2 1684 aa26.46■■□□□ 1.83
SNAPC3-207ENST00000610884 DENND4BO75064 1496 aaPredicted RBP26.46■■□□□ 1.83
SNAPC3-207ENST00000610884 EFCAB2Q5VUJ9 269 aa26.45■■□□□ 1.83
SNAPC3-207ENST00000610884 PLCH2O75038 1416 aa26.45■■□□□ 1.82
SNAPC3-207ENST00000610884 ANKRD30AQ9BXX3 1397 aa26.44■■□□□ 1.82
SNAPC3-207ENST00000610884 SLC4A1APQ9BWU0 796 aaKnown RBP26.44■■□□□ 1.82
SNAPC3-207ENST00000610884 MYO5CQ9NQX4 1742 aa26.43■■□□□ 1.82
SNAPC3-207ENST00000610884 ZNF316A6NFI3 1004 aaPredicted RBP26.4■■□□□ 1.82
SNAPC3-207ENST00000610884 MYT1LQ9UL68 1186 aa26.39■■□□□ 1.81
SNAPC3-207ENST00000610884 KIF15Q9NS87 1388 aa26.38■■□□□ 1.81
SNAPC3-207ENST00000610884 CROCC2H7BZ55 1655 aa26.38■■□□□ 1.81
SNAPC3-207ENST00000610884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.38■■□□□ 1.814e-6■■■□□ 16.3
SNAPC3-207ENST00000610884 ANKRD50Q9ULJ7 1429 aa26.38■■□□□ 1.81
SNAPC3-207ENST00000610884 TRAPPC8Q9Y2L5 1435 aa26.38■■□□□ 1.81
SNAPC3-207ENST00000610884 CCDC141Q6ZP82 1450 aa26.36■■□□□ 1.81
SNAPC3-207ENST00000610884 HIRIP3Q9BW71 556 aaPredicted RBP26.36■■□□□ 1.81
SNAPC3-207ENST00000610884 RIMBP3CA6NJZ7 1639 aa26.35■■□□□ 1.81
SNAPC3-207ENST00000610884 RIMBP3BA6NNM3 1639 aa26.35■■□□□ 1.81
SNAPC3-207ENST00000610884 RIMBP3Q9UFD9 1639 aa26.35■■□□□ 1.81
SNAPC3-207ENST00000610884 ADGRL2O95490 1459 aa26.31■■□□□ 1.8
SNAPC3-207ENST00000610884 ADGBQ8N7X0 1667 aa26.31■■□□□ 1.8
SNAPC3-207ENST00000610884 NUP155O75694 1391 aa26.31■■□□□ 1.8
SNAPC3-207ENST00000610884 FANCAO15360 1455 aa26.3■■□□□ 1.8
SNAPC3-207ENST00000610884 PKD2Q13563 968 aa26.3■■□□□ 1.8
SNAPC3-207ENST00000610884 DIEXFQ68CQ4 756 aaKnown RBP26.29■■□□□ 1.8
SNAPC3-207ENST00000610884 ARHGEF5Q12774 1597 aa26.27■■□□□ 1.8
SNAPC3-207ENST00000610884 PELP1Q8IZL8 1130 aaKnown RBP26.27■■□□□ 1.8
SNAPC3-207ENST00000610884 TONSLQ96HA7 1378 aa26.27■■□□□ 1.8
SNAPC3-207ENST00000610884 RSPH4AQ5TD94 716 aa26.27■■□□□ 1.8
SNAPC3-207ENST00000610884 PPP1R15AO75807 674 aaPredicted RBP26.25■■□□□ 1.79
SNAPC3-207ENST00000610884 PZPP20742 1482 aa26.25■■□□□ 1.79
SNAPC3-207ENST00000610884 SPAG9O60271 1321 aaKnown RBP26.24■■□□□ 1.79
SNAPC3-207ENST00000610884 SHANK2Q9UPX8 1470 aa26.24■■□□□ 1.79
SNAPC3-207ENST00000610884 SCAPERQ9BY12 1400 aa26.24■■□□□ 1.79
SNAPC3-207ENST00000610884 KIAA1107Q9UPP5 1409 aa26.24■■□□□ 1.79
SNAPC3-207ENST00000610884 CD109Q6YHK3 1445 aa26.23■■□□□ 1.79
SNAPC3-207ENST00000610884 ABCC1P33527 1531 aa26.22■■□□□ 1.79
SNAPC3-207ENST00000610884 ABCA9Q8IUA7 1624 aa26.22■■□□□ 1.79
SNAPC3-207ENST00000610884 PLEKHH2Q8IVE3 1493 aa26.21■■□□□ 1.79
SNAPC3-207ENST00000610884 RAPGEF3O95398 923 aa26.19■■□□□ 1.78
SNAPC3-207ENST00000610884 ADGRL1O94910 1474 aa26.19■■□□□ 1.78
SNAPC3-207ENST00000610884 ANKRD30BQ9BXX2 1392 aa26.18■■□□□ 1.78
SNAPC3-207ENST00000610884 FAM69CQ0P6D2 419 aa26.17■■□□□ 1.78
SNAPC3-207ENST00000610884 L3MBTL2Q969R5 705 aa26.17■■□□□ 1.78
SNAPC3-207ENST00000610884 ACIN1Q9UKV3 1341 aaKnown RBP26.17■■□□□ 1.78
SNAPC3-207ENST00000610884 ZNF326Q5BKZ1 582 aaKnown RBP26.09■■□□□ 1.77
SNAPC3-207ENST00000610884 KIF3BO15066 747 aa26.06■■□□□ 1.76
SNAPC3-207ENST00000610884 TIMELESSQ9UNS1 1208 aa26.05■■□□□ 1.76
SNAPC3-207ENST00000610884 MAST1Q9Y2H9 1570 aa26.04■■□□□ 1.76
SNAPC3-207ENST00000610884 ARAP3Q8WWN8 1544 aa26.03■■□□□ 1.76
SNAPC3-207ENST00000610884 NBPF8Q3BBV2 869 aa26.03■■□□□ 1.76
SNAPC3-207ENST00000610884 KDM2AQ9Y2K7 1162 aa26.02■■□□□ 1.76
SNAPC3-207ENST00000610884 ZFYVE16Q7Z3T8 1539 aa26.01■■□□□ 1.76
SNAPC3-207ENST00000610884 FAM135AQ9P2D6 1515 aa26.01■■□□□ 1.75
SNAPC3-207ENST00000610884 RGL3Q3MIN7 710 aa26■■□□□ 1.75
SNAPC3-207ENST00000610884 TSPOAP1O95153 1857 aa25.99■■□□□ 1.75
SNAPC3-207ENST00000610884 MIER1Q8N108 512 aa25.98■■□□□ 1.75
SNAPC3-207ENST00000610884 DUOX2Q9NRD8 1548 aa25.98■■□□□ 1.75
SNAPC3-207ENST00000610884 RPRD2Q5VT52 1461 aaKnown RBP25.98■■□□□ 1.75
SNAPC3-207ENST00000610884 PLXNC1O60486 1568 aa25.98■■□□□ 1.75
SNAPC3-207ENST00000610884 ATP7AQ04656 1500 aa25.98■■□□□ 1.75
SNAPC3-207ENST00000610884 CENPBP07199 599 aaPredicted RBP25.97■■□□□ 1.75
SNAPC3-207ENST00000610884 GGT6Q6P531 493 aa25.94■■□□□ 1.74
SNAPC3-207ENST00000610884 RTEL1-TNFRSF6BF6WH68 1400 aa25.92■■□□□ 1.74
SNAPC3-207ENST00000610884 GTF3C3Q9Y5Q9 886 aa25.91■■□□□ 1.74
SNAPC3-207ENST00000610884 ERBINQ96RT1 1412 aa25.9■■□□□ 1.74
SNAPC3-207ENST00000610884 ZNF518AQ6AHZ1 1483 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms