RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 CAMSAP2Q08AD1 1489 aa40.41■■■■■ 4.06
CSPG5-205ENST00000610462 PTPRGP23470 1445 aa40.41■■■■■ 4.06
CSPG5-205ENST00000610462 PPP1R15AO75807 674 aaPredicted RBP40.39■■■■■ 4.06
CSPG5-205ENST00000610462 PLEKHD1A6NEE1 506 aa40.38■■■■■ 4.06
CSPG5-205ENST00000610462 CFDP1Q9UEE9 299 aaPredicted RBP40.38■■■■■ 4.06
CSPG5-205ENST00000610462 ACIN1Q9UKV3 1341 aaKnown RBP40.35■■■■■ 4.05
CSPG5-205ENST00000610462 CENPBP07199 599 aaPredicted RBP40.35■■■■■ 4.05
CSPG5-205ENST00000610462 TONSLQ96HA7 1378 aa40.34■■■■■ 4.05
CSPG5-205ENST00000610462 CDC42BPAQ5VT25 1732 aa40.33■■■■■ 4.05
CSPG5-205ENST00000610462 DENND4BO75064 1496 aaPredicted RBP40.31■■■■■ 4.04
CSPG5-205ENST00000610462 ABCC10Q5T3U5 1492 aa40.31■■■■■ 4.04
CSPG5-205ENST00000610462 TRIM52Q96A61 297 aa40.31■■■■■ 4.04
CSPG5-205ENST00000610462 ADGBQ8N7X0 1667 aa40.31■■■■■ 4.04
CSPG5-205ENST00000610462 CROCC2H7BZ55 1655 aa40.29■■■■■ 4.04
CSPG5-205ENST00000610462 SCAF1Q9H7N4 1312 aaKnown RBP40.24■■■■■ 4.03
CSPG5-205ENST00000610462 MPHOSPH9Q99550 1183 aa40.21■■■■■ 4.03
CSPG5-205ENST00000610462 ADGRL2O95490 1459 aa40.19■■■■■ 4.02
CSPG5-205ENST00000610462 ZNF777Q9ULD5 760 aaPredicted RBP40.18■■■■■ 4.02
CSPG5-205ENST00000610462 NCOA1Q15788 1441 aa40.15■■■■■ 4.02
CSPG5-205ENST00000610462 KDM5BQ9UGL1 1544 aa40.13■■■■■ 4.02
CSPG5-205ENST00000610462 ERCC6L2Q5T890 1561 aa40.13■■■■■ 4.01
CSPG5-205ENST00000610462 CLASP1Q7Z460 1538 aa40.12■■■■■ 4.01
CSPG5-205ENST00000610462 ABCC2Q92887 1545 aa40.06■■■■■ 4
CSPG5-205ENST00000610462 SHANK2Q9UPX8 1470 aa40.05■■■■■ 4
CSPG5-205ENST00000610462 YTHDC1Q96MU7 727 aaKnown RBP40.04■■■■■ 4
CSPG5-205ENST00000610462 ANKRD30AQ9BXX3 1397 aa40.04■■■■■ 4
CSPG5-205ENST00000610462 PREX2Q70Z35 1606 aa40.02■■■■■ 4
CSPG5-205ENST00000610462 CDC42BPBQ9Y5S2 1711 aa40■■■■□ 3.99
CSPG5-205ENST00000610462 ARHGEF5Q12774 1597 aa39.98■■■■□ 3.99
CSPG5-205ENST00000610462 ANKRD30BQ9BXX2 1392 aa39.97■■■■□ 3.99
CSPG5-205ENST00000610462 PZPP20742 1482 aa39.94■■■■□ 3.98
CSPG5-205ENST00000610462 C9orf84Q5VXU9 1444 aa39.94■■■■□ 3.98
CSPG5-205ENST00000610462 FOXD1Q16676 465 aa39.93■■■■□ 3.98
CSPG5-205ENST00000610462 SLC4A1APQ9BWU0 796 aaKnown RBP39.93■■■■□ 3.98
CSPG5-205ENST00000610462 SAMD9LQ8IVG5 1584 aa39.91■■■■□ 3.98
CSPG5-205ENST00000610462 RPRD2Q5VT52 1461 aaKnown RBP39.89■■■■□ 3.98
CSPG5-205ENST00000610462 ANKRD50Q9ULJ7 1429 aa39.88■■■■□ 3.97
CSPG5-205ENST00000610462 MBD5Q9P267 1494 aa39.87■■■■□ 3.97
CSPG5-205ENST00000610462 TTC37Q6PGP7 1564 aa39.87■■■■□ 3.97
CSPG5-205ENST00000610462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.85■■■■□ 3.97
CSPG5-205ENST00000610462 UHRF1BP1LA0JNW5 1464 aa39.85■■■■□ 3.97
CSPG5-205ENST00000610462 TSPY4P0CV99 314 aa39.84■■■■□ 3.97
CSPG5-205ENST00000610462 TSPY10P0CW01 314 aa39.84■■■■□ 3.97
CSPG5-205ENST00000610462 HIRIP3Q9BW71 556 aaPredicted RBP39.83■■■■□ 3.97
CSPG5-205ENST00000610462 DDX10Q13206 875 aaKnown RBP39.82■■■■□ 3.97
CSPG5-205ENST00000610462 HNRNPMP52272 730 aaKnown RBP eCLIP39.81■■■■□ 3.96
CSPG5-205ENST00000610462 ZCCHC11Q5TAX3 1644 aaKnown RBP39.81■■■■□ 3.96
CSPG5-205ENST00000610462 CCDC141Q6ZP82 1450 aa39.8■■■■□ 3.96
CSPG5-205ENST00000610462 MYO5CQ9NQX4 1742 aa39.8■■■■□ 3.96
CSPG5-205ENST00000610462 L3MBTL2Q969R5 705 aa39.78■■■■□ 3.96
CSPG5-205ENST00000610462 RSPH4AQ5TD94 716 aa39.76■■■■□ 3.96
CSPG5-205ENST00000610462 ARHGAP5Q13017 1502 aa39.75■■■■□ 3.95
CSPG5-205ENST00000610462 KIAA1107Q9UPP5 1409 aa39.75■■■■□ 3.95
CSPG5-205ENST00000610462 TEX14Q8IWB6 1497 aa39.75■■■■□ 3.95
CSPG5-205ENST00000610462 KDM5DQ9BY66 1539 aa39.71■■■■□ 3.95
CSPG5-205ENST00000610462 KIF15Q9NS87 1388 aa39.71■■■■□ 3.95
CSPG5-205ENST00000610462 GTF3C3Q9Y5Q9 886 aa39.69■■■■□ 3.94
CSPG5-205ENST00000610462 SYCP2Q9BX26 1530 aa39.69■■■■□ 3.94
CSPG5-205ENST00000610462 MAST1Q9Y2H9 1570 aa39.68■■■■□ 3.94
CSPG5-205ENST00000610462 PLEKHH2Q8IVE3 1493 aa39.64■■■■□ 3.94
CSPG5-205ENST00000610462 PKD2Q13563 968 aa39.63■■■■□ 3.94
CSPG5-205ENST00000610462 NUP155O75694 1391 aa39.62■■■■□ 3.93
CSPG5-205ENST00000610462 KCNH8Q96L42 1107 aa39.59■■■■□ 3.93
CSPG5-205ENST00000610462 HSPA5P11021 654 aaKnown RBP39.57■■■■□ 3.93
CSPG5-205ENST00000610462 PLCH2O75038 1416 aa39.56■■■■□ 3.92
CSPG5-205ENST00000610462 EIF4G2P78344 907 aaKnown RBP eCLIP39.55■■■■□ 3.92
CSPG5-205ENST00000610462 NBPF8Q3BBV2 869 aa39.52■■■■□ 3.92
CSPG5-205ENST00000610462 PLXNC1O60486 1568 aa39.51■■■■□ 3.92
CSPG5-205ENST00000610462 ARHGEF12Q9NZN5 1544 aa39.45■■■■□ 3.91
CSPG5-205ENST00000610462 ANP32CO43423 234 aa39.44■■■■□ 3.9
CSPG5-205ENST00000610462 UNC13BO14795 1591 aa39.43■■■■□ 3.9
CSPG5-205ENST00000610462 EFCAB2Q5VUJ9 269 aa39.43■■■■□ 3.9
CSPG5-205ENST00000610462 ABCC1P33527 1531 aa39.42■■■■□ 3.9
CSPG5-205ENST00000610462 FAM135AQ9P2D6 1515 aa39.41■■■■□ 3.9
CSPG5-205ENST00000610462 ARAP3Q8WWN8 1544 aa39.4■■■■□ 3.9
CSPG5-205ENST00000610462 CCER2I3L3R5 266 aa39.38■■■■□ 3.89
CSPG5-205ENST00000610462 WASHC2AQ641Q2 1341 aa39.38■■■■□ 3.89
CSPG5-205ENST00000610462 DUOX2Q9NRD8 1548 aa39.35■■■■□ 3.89
CSPG5-205ENST00000610462 WDR7Q9Y4E6 1490 aa39.34■■■■□ 3.89
CSPG5-205ENST00000610462 SPATA31E1Q6ZUB1 1445 aa39.32■■■■□ 3.89
CSPG5-205ENST00000610462 POLR1AO95602 1720 aaPredicted RBP39.3■■■■□ 3.88
CSPG5-205ENST00000610462 IQGAP3Q86VI3 1631 aa39.28■■■■□ 3.88
CSPG5-205ENST00000610462 UHRF1BP1Q6BDS2 1440 aa39.27■■■■□ 3.88
CSPG5-205ENST00000610462 ERBINQ96RT1 1412 aa39.26■■■■□ 3.88
CSPG5-205ENST00000610462 TRAPPC8Q9Y2L5 1435 aa39.25■■■■□ 3.87
CSPG5-205ENST00000610462 PELP1Q8IZL8 1130 aaKnown RBP39.25■■■■□ 3.87
CSPG5-205ENST00000610462 ABCA9Q8IUA7 1624 aa39.23■■■■□ 3.87
CSPG5-205ENST00000610462 CCDC7Q96M83 1385 aa39.23■■■■□ 3.87
CSPG5-205ENST00000610462 MAGI2Q86UL8 1455 aa39.21■■■■□ 3.87
CSPG5-205ENST00000610462 OSCARQ8IYS5 282 aa39.19■■■■□ 3.86
CSPG5-205ENST00000610462 CNTLNQ9NXG0 1405 aa39.18■■■■□ 3.86
CSPG5-205ENST00000610462 C11orf95C9JLR9 678 aaPredicted RBP39.18■■■■□ 3.86
CSPG5-205ENST00000610462 RTEL1-TNFRSF6BF6WH68 1400 aa39.16■■■■□ 3.86
CSPG5-205ENST00000610462 RALGAPBQ86X10 1494 aa39.15■■■■□ 3.86
CSPG5-205ENST00000610462 ZNF326Q5BKZ1 582 aaKnown RBP39.12■■■■□ 3.85
CSPG5-205ENST00000610462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.12■■■■□ 3.85
CSPG5-205ENST00000610462 KDM5CP41229 1560 aa39.12■■■■□ 3.85
CSPG5-205ENST00000610462 ASXL2Q76L83 1435 aa39.11■■■■□ 3.85
CSPG5-205ENST00000610462 ZFYVE16Q7Z3T8 1539 aa39.1■■■■□ 3.85
CSPG5-205ENST00000610462 FANCAO15360 1455 aa39.1■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms