RNA–Protein interactions for RNA: ENST00000610289.2

PRAMEF28P-201, Transcript of PRAME family member 28, pseudogene, humanhuman

BASIC

Gene PRAMEF28P, Length 1,450 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF28P-201ENST00000610289 RIMS1Q86UR5 1692 aaKnown RBP17.84■□□□□ 0.45
PRAMEF28P-201ENST00000610289 FMN1Q68DA7 1419 aa17.84■□□□□ 0.45
PRAMEF28P-201ENST00000610289 HSPA2P54652 639 aa17.84■□□□□ 0.45
PRAMEF28P-201ENST00000610289 ARHGAP35Q9NRY4 1499 aa17.84■□□□□ 0.45
PRAMEF28P-201ENST00000610289 EFCAB2Q5VUJ9 269 aa17.83■□□□□ 0.45
PRAMEF28P-201ENST00000610289 SIGLEC1Q9BZZ2 1709 aa17.83■□□□□ 0.45
PRAMEF28P-201ENST00000610289 HECW1Q76N89 1606 aa17.83■□□□□ 0.44
PRAMEF28P-201ENST00000610289 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
PRAMEF28P-201ENST00000610289 CDK11AQ9UQ88 783 aaPredicted RBP17.82■□□□□ 0.44
PRAMEF28P-201ENST00000610289 ATP10AO60312 1499 aa17.78■□□□□ 0.44
PRAMEF28P-201ENST00000610289 AFAP1Q8N556 730 aa17.77■□□□□ 0.44
PRAMEF28P-201ENST00000610289 TROQ12816 1431 aaPredicted RBP17.76■□□□□ 0.43
PRAMEF28P-201ENST00000610289 KIF14Q15058 1648 aa17.75■□□□□ 0.43
PRAMEF28P-201ENST00000610289 C9orf84Q5VXU9 1444 aa17.73■□□□□ 0.43
PRAMEF28P-201ENST00000610289 CEBPAP49715 358 aaPredicted RBP17.73■□□□□ 0.43
PRAMEF28P-201ENST00000610289 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
PRAMEF28P-201ENST00000610289 ARHGEF12Q9NZN5 1544 aa17.72■□□□□ 0.43
PRAMEF28P-201ENST00000610289 CLIP1P30622 1438 aa17.71■□□□□ 0.43
PRAMEF28P-201ENST00000610289 ZNF518AQ6AHZ1 1483 aa17.71■□□□□ 0.43
PRAMEF28P-201ENST00000610289 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.43
PRAMEF28P-201ENST00000610289 FER1L4A9Z1Z3 1794 aa17.7■□□□□ 0.42
PRAMEF28P-201ENST00000610289 MYT1LQ9UL68 1186 aa17.69■□□□□ 0.42
PRAMEF28P-201ENST00000610289 KDM5CP41229 1560 aa17.67■□□□□ 0.42
PRAMEF28P-201ENST00000610289 LRRIQ1Q96JM4 1722 aa17.67■□□□□ 0.42
PRAMEF28P-201ENST00000610289 CERKQ8TCT0 537 aa17.66■□□□□ 0.42
PRAMEF28P-201ENST00000610289 CASKIN1Q8WXD9 1431 aa17.65■□□□□ 0.42
PRAMEF28P-201ENST00000610289 TRAPPC8Q9Y2L5 1435 aa17.64■□□□□ 0.41
PRAMEF28P-201ENST00000610289 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
PRAMEF28P-201ENST00000610289 CDC42BPBQ9Y5S2 1711 aa17.63■□□□□ 0.41
PRAMEF28P-201ENST00000610289 DIP2CQ9Y2E4 1556 aa17.62■□□□□ 0.41
PRAMEF28P-201ENST00000610289 CCDC18Q5T9S5 1454 aa17.6■□□□□ 0.41
PRAMEF28P-201ENST00000610289 PREX1Q8TCU6 1659 aa17.59■□□□□ 0.41
PRAMEF28P-201ENST00000610289 REREQ9P2R6 1566 aa17.58■□□□□ 0.41
PRAMEF28P-201ENST00000610289 ABCC1P33527 1531 aa17.58■□□□□ 0.41
PRAMEF28P-201ENST00000610289 ABCA6Q8N139 1617 aa17.58■□□□□ 0.4
PRAMEF28P-201ENST00000610289 DMRT2Q9Y5R5 561 aa17.57■□□□□ 0.4
PRAMEF28P-201ENST00000610289 PREX2Q70Z35 1606 aa17.57■□□□□ 0.4
PRAMEF28P-201ENST00000610289 SETD1BQ9UPS6 1966 aaKnown RBP17.57■□□□□ 0.4
PRAMEF28P-201ENST00000610289 ZNF777Q9ULD5 760 aaPredicted RBP17.56■□□□□ 0.4
PRAMEF28P-201ENST00000610289 UHRF1BP1Q6BDS2 1440 aa17.56■□□□□ 0.4
PRAMEF28P-201ENST00000610289 AGLP35573 1532 aa17.56■□□□□ 0.4
PRAMEF28P-201ENST00000610289 ESF1Q9H501 851 aaKnown RBP17.56■□□□□ 0.4
PRAMEF28P-201ENST00000610289 FYCO1Q9BQS8 1478 aa17.54■□□□□ 0.4
PRAMEF28P-201ENST00000610289 STRCQ7RTU9 1775 aa17.53■□□□□ 0.4
PRAMEF28P-201ENST00000610289 HNRNPMP52272 730 aaKnown RBP eCLIP17.53■□□□□ 0.4
PRAMEF28P-201ENST00000610289 ITSN2Q9NZM3 1697 aa17.53■□□□□ 0.4
PRAMEF28P-201ENST00000610289 KIDINS220Q9ULH0 1771 aa17.52■□□□□ 0.4
PRAMEF28P-201ENST00000610289 CDC42BPAQ5VT25 1732 aa17.52■□□□□ 0.4
PRAMEF28P-201ENST00000610289 GPATCH8Q9UKJ3 1502 aaKnown RBP17.52■□□□□ 0.39
PRAMEF28P-201ENST00000610289 C3P01024 1663 aa17.5■□□□□ 0.39
PRAMEF28P-201ENST00000610289 SPAG9O60271 1321 aaKnown RBP17.5■□□□□ 0.39
PRAMEF28P-201ENST00000610289 SAMD9LQ8IVG5 1584 aa17.49■□□□□ 0.39
PRAMEF28P-201ENST00000610289 CNTLNQ9NXG0 1405 aa17.48■□□□□ 0.39
PRAMEF28P-201ENST00000610289 CFDP1Q9UEE9 299 aaPredicted RBP17.48■□□□□ 0.39
PRAMEF28P-201ENST00000610289 SYCP2Q9BX26 1530 aa17.47■□□□□ 0.39
PRAMEF28P-201ENST00000610289 PTPRTO14522 1441 aa17.46■□□□□ 0.39
PRAMEF28P-201ENST00000610289 ZMYM3Q14202 1370 aa17.46■□□□□ 0.39
PRAMEF28P-201ENST00000610289 KIAA1107Q9UPP5 1409 aa17.46■□□□□ 0.38
PRAMEF28P-201ENST00000610289 CCNB3Q8WWL7 1395 aa17.44■□□□□ 0.38
PRAMEF28P-201ENST00000610289 NPATQ14207 1427 aa17.42■□□□□ 0.38
PRAMEF28P-201ENST00000610289 NCOA1Q15788 1441 aa17.42■□□□□ 0.38
PRAMEF28P-201ENST00000610289 PLEKHH2Q8IVE3 1493 aa17.41■□□□□ 0.38
PRAMEF28P-201ENST00000610289 MTUS2Q5JR59 1369 aa17.41■□□□□ 0.38
PRAMEF28P-201ENST00000610289 ZNF644Q9H582 1327 aaPredicted RBP17.41■□□□□ 0.38
PRAMEF28P-201ENST00000610289 ATP7AQ04656 1500 aa17.4■□□□□ 0.38
PRAMEF28P-201ENST00000610289 GGT6Q6P531 493 aa17.4■□□□□ 0.38
PRAMEF28P-201ENST00000610289 A2MP01023 1474 aa17.39■□□□□ 0.38
PRAMEF28P-201ENST00000610289 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
PRAMEF28P-201ENST00000610289 LTBP4Q8N2S1 1624 aa17.38■□□□□ 0.37
PRAMEF28P-201ENST00000610289 NCKAP5LQ9HCH0 1330 aa17.38■□□□□ 0.37
PRAMEF28P-201ENST00000610289 PLXNC1O60486 1568 aa17.37■□□□□ 0.37
PRAMEF28P-201ENST00000610289 INO80Q9ULG1 1556 aaPredicted RBP17.37■□□□□ 0.37
PRAMEF28P-201ENST00000610289 MROH2AA6NES4 1674 aa17.36■□□□□ 0.37
PRAMEF28P-201ENST00000610289 CAMSAP1Q5T5Y3 1602 aa17.36■□□□□ 0.37
PRAMEF28P-201ENST00000610289 PTPRKQ15262 1439 aa17.35■□□□□ 0.37
PRAMEF28P-201ENST00000610289 MBD5Q9P267 1494 aa17.34■□□□□ 0.37
PRAMEF28P-201ENST00000610289 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
PRAMEF28P-201ENST00000610289 DISP3Q9P2K9 1392 aa17.33■□□□□ 0.36
PRAMEF28P-201ENST00000610289 CLTCQ00610 1675 aaKnown RBP17.32■□□□□ 0.36
PRAMEF28P-201ENST00000610289 ILDR2Q71H61 639 aa17.31■□□□□ 0.36
PRAMEF28P-201ENST00000610289 TIAM1Q13009 1591 aa17.31■□□□□ 0.36
PRAMEF28P-201ENST00000610289 ZNF335Q9H4Z2 1342 aaPredicted RBP17.31■□□□□ 0.36
PRAMEF28P-201ENST00000610289 PKD2Q13563 968 aa17.31■□□□□ 0.36
PRAMEF28P-201ENST00000610289 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
PRAMEF28P-201ENST00000610289 RTEL1-TNFRSF6BF6WH68 1400 aa17.29■□□□□ 0.36
PRAMEF28P-201ENST00000610289 IQSEC2Q5JU85 1478 aa17.29■□□□□ 0.36
PRAMEF28P-201ENST00000610289 DHX29Q7Z478 1369 aaKnown RBP17.29■□□□□ 0.36
PRAMEF28P-201ENST00000610289 EHBP1L1Q8N3D4 1523 aa17.29■□□□□ 0.36
PRAMEF28P-201ENST00000610289 PLA2R1Q13018 1463 aa17.28■□□□□ 0.36
PRAMEF28P-201ENST00000610289 TCOF1Q13428 1488 aaKnown RBP17.27■□□□□ 0.35
PRAMEF28P-201ENST00000610289 MYO3AQ8NEV4 1616 aa17.27■□□□□ 0.35
PRAMEF28P-201ENST00000610289 ADGBQ8N7X0 1667 aa17.27■□□□□ 0.35
PRAMEF28P-201ENST00000610289 CEP170BQ9Y4F5 1589 aaPredicted RBP17.26■□□□□ 0.35
PRAMEF28P-201ENST00000610289 KIF3BO15066 747 aa17.26■□□□□ 0.35
PRAMEF28P-201ENST00000610289 FBXO31Q5XUX0 539 aaPredicted RBP17.26■□□□□ 0.35
PRAMEF28P-201ENST00000610289 ZNF142P52746 1687 aaPredicted RBP17.25■□□□□ 0.35
PRAMEF28P-201ENST00000610289 RSPH4AQ5TD94 716 aa17.24■□□□□ 0.35
PRAMEF28P-201ENST00000610289 NCOA2Q15596 1464 aa17.23■□□□□ 0.35
PRAMEF28P-201ENST00000610289 UBAP1LF5GYI3 381 aa17.23■□□□□ 0.35
PRAMEF28P-201ENST00000610289 A2ML1A8K2U0 1454 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms