RNA–Protein interactions for RNA: ENST00000609401.5

LINC01278-205, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 2 BASIC

Gene LINC01278, Length 2,886 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-205ENST00000609401 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.32
LINC01278-205ENST00000609401 NFKBIBQ15653 356 aa13.07□□□□□ -0.32
LINC01278-205ENST00000609401 FRAT1Q92837 279 aaPredicted RBP13.07□□□□□ -0.32
LINC01278-205ENST00000609401 KIF7Q2M1P5 1343 aa13.07□□□□□ -0.32
LINC01278-205ENST00000609401 FAM43AQ8N2R8 423 aa13.06□□□□□ -0.32
LINC01278-205ENST00000609401 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
LINC01278-205ENST00000609401 RRP1P56182 461 aaKnown RBP13.05□□□□□ -0.32
LINC01278-205ENST00000609401 P3H3Q8IVL6 736 aa13.05□□□□□ -0.32
LINC01278-205ENST00000609401 FGD5Q6ZNL6 1462 aa13.05□□□□□ -0.32
LINC01278-205ENST00000609401 PKNOX2Q96KN3 472 aa13.04□□□□□ -0.32
LINC01278-205ENST00000609401 EXOC6Q8TAG9 804 aa13.04□□□□□ -0.32
LINC01278-205ENST00000609401 L3MBTL2Q969R5 705 aa13.04□□□□□ -0.32
LINC01278-205ENST00000609401 FHOD3Q2V2M9 1422 aa13.03□□□□□ -0.32
LINC01278-205ENST00000609401 DENND4BO75064 1496 aaPredicted RBP13.02□□□□□ -0.32
LINC01278-205ENST00000609401 EFCAB5A4FU69 1503 aa13.02□□□□□ -0.33
LINC01278-205ENST00000609401 DHX29Q7Z478 1369 aaKnown RBP13.02□□□□□ -0.33
LINC01278-205ENST00000609401 SPATA31E1Q6ZUB1 1445 aa13.01□□□□□ -0.33
LINC01278-205ENST00000609401 MTUS2Q5JR59 1369 aa13□□□□□ -0.33
LINC01278-205ENST00000609401 MYOM3Q5VTT5 1437 aa13□□□□□ -0.33
LINC01278-205ENST00000609401 PNISRQ8TF01 805 aaKnown RBP12.99□□□□□ -0.33
LINC01278-205ENST00000609401 GCC2Q8IWJ2 1684 aa12.99□□□□□ -0.33
LINC01278-205ENST00000609401 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
LINC01278-205ENST00000609401 DAXXQ9UER7 740 aaPredicted RBP12.99□□□□□ -0.33
LINC01278-205ENST00000609401 NBPF8Q3BBV2 869 aa12.98□□□□□ -0.33
LINC01278-205ENST00000609401 RCAN3Q9UKA8 241 aa12.97□□□□□ -0.33
LINC01278-205ENST00000609401 TMC1Q8TDI8 760 aa12.96□□□□□ -0.34
LINC01278-205ENST00000609401 MPHOSPH9Q99550 1183 aa12.96□□□□□ -0.34
LINC01278-205ENST00000609401 MIA2Q96PC5 1412 aa12.96□□□□□ -0.34
LINC01278-205ENST00000609401 RRP7BPQ9NSQ0 103 aa12.95□□□□□ -0.34
LINC01278-205ENST00000609401 CFTRP13569 1480 aa12.95□□□□□ -0.34
LINC01278-205ENST00000609401 TEX14Q8IWB6 1497 aa12.94□□□□□ -0.34
LINC01278-205ENST00000609401 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
LINC01278-205ENST00000609401 SENP3-EIF4A1A0A087X0R7 540 aa12.94□□□□□ -0.34
LINC01278-205ENST00000609401 RPRD2Q5VT52 1461 aaKnown RBP12.94□□□□□ -0.34
LINC01278-205ENST00000609401 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
LINC01278-205ENST00000609401 SNAPC4Q5SXM2 1469 aa12.93□□□□□ -0.34
LINC01278-205ENST00000609401 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
LINC01278-205ENST00000609401 SLC4A3P48751 1232 aa12.93□□□□□ -0.34
LINC01278-205ENST00000609401 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
LINC01278-205ENST00000609401 ARID4BQ4LE39 1312 aaPredicted RBP12.91□□□□□ -0.34
LINC01278-205ENST00000609401 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
LINC01278-205ENST00000609401 FRAT2O75474 233 aaPredicted RBP12.91□□□□□ -0.34
LINC01278-205ENST00000609401 HMGXB3Q12766 1538 aa12.9□□□□□ -0.34
LINC01278-205ENST00000609401 KDM6BO15054 1643 aa12.9□□□□□ -0.34
LINC01278-205ENST00000609401 ANKRD30BQ9BXX2 1392 aa12.9□□□□□ -0.34
LINC01278-205ENST00000609401 EHBP1L1Q8N3D4 1523 aa12.9□□□□□ -0.34
LINC01278-205ENST00000609401 CHIC2Q9UKJ5 165 aa12.9□□□□□ -0.34
LINC01278-205ENST00000609401 BRD4O60885 1362 aaPredicted RBP12.89□□□□□ -0.35
LINC01278-205ENST00000609401 TCOF1Q13428 1488 aaKnown RBP12.89□□□□□ -0.35
LINC01278-205ENST00000609401 POLR3GLQ9BT43 218 aa12.89□□□□□ -0.35
LINC01278-205ENST00000609401 ROCK2O75116 1388 aaKnown RBP12.88□□□□□ -0.35
LINC01278-205ENST00000609401 UGGT2Q9NYU1 1516 aa12.88□□□□□ -0.35
LINC01278-205ENST00000609401 BCORL1Q5H9F3 1711 aa12.87□□□□□ -0.35
LINC01278-205ENST00000609401 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
LINC01278-205ENST00000609401 PRDM2Q13029 1718 aa12.87□□□□□ -0.35
LINC01278-205ENST00000609401 KTN1Q86UP2 1357 aaKnown RBP12.86□□□□□ -0.35
LINC01278-205ENST00000609401 ARHGEF11O15085 1522 aa12.86□□□□□ -0.35
LINC01278-205ENST00000609401 CTTNBP2Q8WZ74 1663 aa12.86□□□□□ -0.35
LINC01278-205ENST00000609401 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
LINC01278-205ENST00000609401 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
LINC01278-205ENST00000609401 RRAGDQ9NQL2 400 aaPredicted RBP12.86□□□□□ -0.35
LINC01278-205ENST00000609401 THOC2Q8NI27 1593 aaKnown RBP12.86□□□□□ -0.35
LINC01278-205ENST00000609401 LRRIQ1Q96JM4 1722 aa12.86□□□□□ -0.35
LINC01278-205ENST00000609401 USP47Q96K76 1375 aa12.85□□□□□ -0.35
LINC01278-205ENST00000609401 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
LINC01278-205ENST00000609401 CRBNQ96SW2 442 aa12.85□□□□□ -0.35
LINC01278-205ENST00000609401 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
LINC01278-205ENST00000609401 RALBP1Q15311 655 aa12.84□□□□□ -0.35
LINC01278-205ENST00000609401 L1TD1Q5T7N2 865 aaKnown RBP12.84□□□□□ -0.35
LINC01278-205ENST00000609401 ZMYND15Q9H091 742 aa12.84□□□□□ -0.35
LINC01278-205ENST00000609401 GRIN2BQ13224 1484 aa12.83□□□□□ -0.35
LINC01278-205ENST00000609401 KDM2BQ8NHM5 1336 aa12.82□□□□□ -0.36
LINC01278-205ENST00000609401 C8orf34Q49A92 452 aa12.82□□□□□ -0.36
LINC01278-205ENST00000609401 PLIN1O60240 522 aa12.81□□□□□ -0.36
LINC01278-205ENST00000609401 CENPQQ7L2Z9 268 aaPredicted RBP12.81□□□□□ -0.36
LINC01278-205ENST00000609401 KDM5CP41229 1560 aa12.81□□□□□ -0.36
LINC01278-205ENST00000609401 MBD5Q9P267 1494 aa12.8□□□□□ -0.36
LINC01278-205ENST00000609401 RRP9O43818 475 aaKnown RBP12.8□□□□□ -0.36
LINC01278-205ENST00000609401 HSP90AA2PQ14568 343 aaPredicted RBP12.79□□□□□ -0.36
LINC01278-205ENST00000609401 POGKQ9P215 609 aa12.79□□□□□ -0.36
LINC01278-205ENST00000609401 KIF14Q15058 1648 aa12.79□□□□□ -0.36
LINC01278-205ENST00000609401 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
LINC01278-205ENST00000609401 CC2D2AQ9P2K1 1620 aa12.78□□□□□ -0.36
LINC01278-205ENST00000609401 NAP1L5Q96NT1 182 aaPredicted RBP12.78□□□□□ -0.36
LINC01278-205ENST00000609401 SAMD9Q5K651 1589 aa12.78□□□□□ -0.36
LINC01278-205ENST00000609401 CUL7Q14999 1698 aa12.78□□□□□ -0.36
LINC01278-205ENST00000609401 HSP90AA1P07900 732 aaKnown RBP12.78□□□□□ -0.36
LINC01278-205ENST00000609401 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.36
LINC01278-205ENST00000609401 NLRP13Q86W25 1043 aa12.77□□□□□ -0.37
LINC01278-205ENST00000609401 PNNQ9H307 717 aaKnown RBP12.77□□□□□ -0.37
LINC01278-205ENST00000609401 MAGI3Q5TCQ9 1506 aa12.77□□□□□ -0.37
LINC01278-205ENST00000609401 ROCK1Q13464 1354 aa12.76□□□□□ -0.37
LINC01278-205ENST00000609401 CLCN1P35523 988 aa12.75□□□□□ -0.37
LINC01278-205ENST00000609401 INSRP06213 1382 aa12.74□□□□□ -0.37
LINC01278-205ENST00000609401 ZNF326Q5BKZ1 582 aaKnown RBP12.74□□□□□ -0.37
LINC01278-205ENST00000609401 PLEKHH2Q8IVE3 1493 aa12.73□□□□□ -0.37
LINC01278-205ENST00000609401 E9PCH4 1651 aa12.73□□□□□ -0.37
LINC01278-205ENST00000609401 ZMYM4Q5VZL5 1548 aa12.73□□□□□ -0.37
LINC01278-205ENST00000609401 C20orf194Q5TEA3 1177 aa12.72□□□□□ -0.37
LINC01278-205ENST00000609401 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms