RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 ROCK1Q13464 1354 aa16.68■□□□□ 0.26
LINC01278-204ENST00000609143 ABCC5O15440 1437 aa16.68■□□□□ 0.26
LINC01278-204ENST00000609143 ZNF644Q9H582 1327 aaPredicted RBP16.67■□□□□ 0.26
LINC01278-204ENST00000609143 CDC42BPAQ5VT25 1732 aa16.67■□□□□ 0.26
LINC01278-204ENST00000609143 ACIN1Q9UKV3 1341 aaKnown RBP16.63■□□□□ 0.25
LINC01278-204ENST00000609143 DIEXFQ68CQ4 756 aaKnown RBP16.63■□□□□ 0.25
LINC01278-204ENST00000609143 ZNF777Q9ULD5 760 aaPredicted RBP16.62■□□□□ 0.25
LINC01278-204ENST00000609143 UHRF1BP1LA0JNW5 1464 aa16.62■□□□□ 0.25
LINC01278-204ENST00000609143 TIMELESSQ9UNS1 1208 aa16.61■□□□□ 0.25
LINC01278-204ENST00000609143 CROCC2H7BZ55 1655 aa16.61■□□□□ 0.25
LINC01278-204ENST00000609143 ADGBQ8N7X0 1667 aa16.61■□□□□ 0.25
LINC01278-204ENST00000609143 KDM6BO15054 1643 aa16.6■□□□□ 0.25
LINC01278-204ENST00000609143 SIN3AQ96ST3 1273 aa16.6■□□□□ 0.25
LINC01278-204ENST00000609143 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
LINC01278-204ENST00000609143 PREX2Q70Z35 1606 aa16.58■□□□□ 0.24
LINC01278-204ENST00000609143 ADGRL2O95490 1459 aa16.57■□□□□ 0.24
LINC01278-204ENST00000609143 ZCCHC11Q5TAX3 1644 aaKnown RBP16.57■□□□□ 0.24
LINC01278-204ENST00000609143 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
LINC01278-204ENST00000609143 KDM5BQ9UGL1 1544 aa16.56■□□□□ 0.24
LINC01278-204ENST00000609143 SHANK2Q9UPX8 1470 aa16.56■□□□□ 0.24
LINC01278-204ENST00000609143 NCOA1Q15788 1441 aa16.55■□□□□ 0.24
LINC01278-204ENST00000609143 CDC42BPBQ9Y5S2 1711 aa16.54■□□□□ 0.24
LINC01278-204ENST00000609143 ANKRD30AQ9BXX3 1397 aa16.54■□□□□ 0.24
LINC01278-204ENST00000609143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC01278-204ENST00000609143 TTC37Q6PGP7 1564 aa16.54■□□□□ 0.24
LINC01278-204ENST00000609143 ARHGEF5Q12774 1597 aa16.53■□□□□ 0.24
LINC01278-204ENST00000609143 MYO5CQ9NQX4 1742 aa16.51■□□□□ 0.23
LINC01278-204ENST00000609143 SAMD9LQ8IVG5 1584 aa16.51■□□□□ 0.23
LINC01278-204ENST00000609143 TONSLQ96HA7 1378 aa16.51■□□□□ 0.23
LINC01278-204ENST00000609143 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
LINC01278-204ENST00000609143 C9orf84Q5VXU9 1444 aa16.51■□□□□ 0.23
LINC01278-204ENST00000609143 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
LINC01278-204ENST00000609143 ARHGAP5Q13017 1502 aa16.5■□□□□ 0.23
LINC01278-204ENST00000609143 TSPY4P0CV99 314 aa16.49■□□□□ 0.23
LINC01278-204ENST00000609143 TSPY10P0CW01 314 aa16.49■□□□□ 0.23
LINC01278-204ENST00000609143 DENND4BO75064 1496 aaPredicted RBP16.49■□□□□ 0.23
LINC01278-204ENST00000609143 CCDC141Q6ZP82 1450 aa16.48■□□□□ 0.23
LINC01278-204ENST00000609143 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
LINC01278-204ENST00000609143 RSPH4AQ5TD94 716 aa16.48■□□□□ 0.23
LINC01278-204ENST00000609143 KCNH8Q96L42 1107 aa16.47■□□□□ 0.23
LINC01278-204ENST00000609143 HNRNPMP52272 730 aaKnown RBP eCLIP16.46■□□□□ 0.23
LINC01278-204ENST00000609143 PLEKHH2Q8IVE3 1493 aa16.46■□□□□ 0.23
LINC01278-204ENST00000609143 PPP1R15AO75807 674 aaPredicted RBP16.46■□□□□ 0.23
LINC01278-204ENST00000609143 ANKRD50Q9ULJ7 1429 aa16.45■□□□□ 0.22
LINC01278-204ENST00000609143 SYCP2Q9BX26 1530 aa16.44■□□□□ 0.22
LINC01278-204ENST00000609143 PLCH2O75038 1416 aa16.43■□□□□ 0.22
LINC01278-204ENST00000609143 KIAA1107Q9UPP5 1409 aa16.43■□□□□ 0.22
LINC01278-204ENST00000609143 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
LINC01278-204ENST00000609143 MYT1Q01538 1121 aa16.42■□□□□ 0.22
LINC01278-204ENST00000609143 WDR7Q9Y4E6 1490 aa16.41■□□□□ 0.22
LINC01278-204ENST00000609143 KIF15Q9NS87 1388 aa16.41■□□□□ 0.22
LINC01278-204ENST00000609143 MAST1Q9Y2H9 1570 aa16.41■□□□□ 0.22
LINC01278-204ENST00000609143 PZPP20742 1482 aa16.41■□□□□ 0.22
LINC01278-204ENST00000609143 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
LINC01278-204ENST00000609143 ARAP3Q8WWN8 1544 aa16.39■□□□□ 0.21
LINC01278-204ENST00000609143 ANKRD30BQ9BXX2 1392 aa16.39■□□□□ 0.21
LINC01278-204ENST00000609143 FOXD1Q16676 465 aa16.37■□□□□ 0.21
LINC01278-204ENST00000609143 ABCC1P33527 1531 aa16.36■□□□□ 0.21
LINC01278-204ENST00000609143 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
LINC01278-204ENST00000609143 RPRD2Q5VT52 1461 aaKnown RBP16.35■□□□□ 0.21
LINC01278-204ENST00000609143 PLXNC1O60486 1568 aa16.35■□□□□ 0.21
LINC01278-204ENST00000609143 ABCA9Q8IUA7 1624 aa16.34■□□□□ 0.21
LINC01278-204ENST00000609143 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
LINC01278-204ENST00000609143 NUP155O75694 1391 aa16.33■□□□□ 0.21
LINC01278-204ENST00000609143 ASXL2Q76L83 1435 aa16.33■□□□□ 0.21
LINC01278-204ENST00000609143 NPM1P06748 294 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC01278-204ENST00000609143 MIER1Q8N108 512 aa16.31■□□□□ 0.2
LINC01278-204ENST00000609143 PKD2Q13563 968 aa16.31■□□□□ 0.2
LINC01278-204ENST00000609143 DUOX2Q9NRD8 1548 aa16.29■□□□□ 0.2
LINC01278-204ENST00000609143 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
LINC01278-204ENST00000609143 FANCAO15360 1455 aa16.28■□□□□ 0.2
LINC01278-204ENST00000609143 TEX14Q8IWB6 1497 aa16.28■□□□□ 0.2
LINC01278-204ENST00000609143 UNC13BO14795 1591 aa16.27■□□□□ 0.2
LINC01278-204ENST00000609143 TRAPPC8Q9Y2L5 1435 aa16.27■□□□□ 0.2
LINC01278-204ENST00000609143 ERBINQ96RT1 1412 aa16.25■□□□□ 0.19
LINC01278-204ENST00000609143 FAM135AQ9P2D6 1515 aa16.25■□□□□ 0.19
LINC01278-204ENST00000609143 RTEL1-TNFRSF6BF6WH68 1400 aa16.24■□□□□ 0.19
LINC01278-204ENST00000609143 SPAG9O60271 1321 aaKnown RBP16.23■□□□□ 0.19
LINC01278-204ENST00000609143 ZFYVE16Q7Z3T8 1539 aa16.22■□□□□ 0.19
LINC01278-204ENST00000609143 ADGRL1O94910 1474 aa16.22■□□□□ 0.19
LINC01278-204ENST00000609143 IQGAP3Q86VI3 1631 aa16.2■□□□□ 0.18
LINC01278-204ENST00000609143 MAGI2Q86UL8 1455 aa16.2■□□□□ 0.18
LINC01278-204ENST00000609143 AFAP1Q8N556 730 aa16.2■□□□□ 0.18
LINC01278-204ENST00000609143 HIRIP3Q9BW71 556 aaPredicted RBP16.19■□□□□ 0.18
LINC01278-204ENST00000609143 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
LINC01278-204ENST00000609143 CFAP74Q9C0B2 1584 aa16.18■□□□□ 0.18
LINC01278-204ENST00000609143 INO80Q9ULG1 1556 aaPredicted RBP16.18■□□□□ 0.18
LINC01278-204ENST00000609143 ATP7AQ04656 1500 aa16.18■□□□□ 0.18
LINC01278-204ENST00000609143 CENPBP07199 599 aaPredicted RBP16.17■□□□□ 0.18
LINC01278-204ENST00000609143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
LINC01278-204ENST00000609143 CD109Q6YHK3 1445 aa16.16■□□□□ 0.18
LINC01278-204ENST00000609143 EIF4G2P78344 907 aaKnown RBP eCLIP16.16■□□□□ 0.18
LINC01278-204ENST00000609143 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
LINC01278-204ENST00000609143 NBPF8Q3BBV2 869 aa16.15■□□□□ 0.18
LINC01278-204ENST00000609143 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
LINC01278-204ENST00000609143 ZNF518AQ6AHZ1 1483 aa16.12■□□□□ 0.17
LINC01278-204ENST00000609143 CCDC144AA2RUR9 1427 aa16.12■□□□□ 0.17
LINC01278-204ENST00000609143 MYT1LQ9UL68 1186 aa16.11■□□□□ 0.17
LINC01278-204ENST00000609143 RIMBP3CA6NJZ7 1639 aa16.11■□□□□ 0.17
LINC01278-204ENST00000609143 RIMBP3BA6NNM3 1639 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms