RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 DENND4BO75064 1496 aaPredicted RBP14.57□□□□□ -0.08
LINC01396-201ENST00000609099 HECW1Q76N89 1606 aa14.57□□□□□ -0.08
LINC01396-201ENST00000609099 PTPRTO14522 1441 aa14.56□□□□□ -0.08
LINC01396-201ENST00000609099 MED1Q15648 1581 aaPredicted RBP14.56□□□□□ -0.08
LINC01396-201ENST00000609099 IQSEC2Q5JU85 1478 aa14.55□□□□□ -0.08
LINC01396-201ENST00000609099 AKNAQ7Z591 1439 aa14.54□□□□□ -0.08
LINC01396-201ENST00000609099 GOLGA3Q08378 1498 aa14.53□□□□□ -0.08
LINC01396-201ENST00000609099 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
LINC01396-201ENST00000609099 MLECQ14165 292 aa14.53□□□□□ -0.08
LINC01396-201ENST00000609099 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
LINC01396-201ENST00000609099 EFCAB5A4FU69 1503 aa14.51□□□□□ -0.09
LINC01396-201ENST00000609099 NUP153P49790 1475 aaKnown RBP14.51□□□□□ -0.09
LINC01396-201ENST00000609099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.51□□□□□ -0.09
LINC01396-201ENST00000609099 POGZQ7Z3K3 1410 aa14.49□□□□□ -0.09
LINC01396-201ENST00000609099 C3P01024 1663 aa14.49□□□□□ -0.09
LINC01396-201ENST00000609099 RAPGEF6Q8TEU7 1601 aa14.49□□□□□ -0.09
LINC01396-201ENST00000609099 NCOA1Q15788 1441 aa14.48□□□□□ -0.09
LINC01396-201ENST00000609099 SAMD9Q5K651 1589 aa14.47□□□□□ -0.09
LINC01396-201ENST00000609099 HOXD11P31277 338 aaPredicted RBP14.46□□□□□ -0.09
LINC01396-201ENST00000609099 UHRF1BP1Q6BDS2 1440 aa14.46□□□□□ -0.09
LINC01396-201ENST00000609099 MAGI2Q86UL8 1455 aa14.45□□□□□ -0.1
LINC01396-201ENST00000609099 SETD1BQ9UPS6 1966 aaKnown RBP14.45□□□□□ -0.1
LINC01396-201ENST00000609099 P3H3Q8IVL6 736 aa14.44□□□□□ -0.1
LINC01396-201ENST00000609099 CFAP74Q9C0B2 1584 aa14.43□□□□□ -0.1
LINC01396-201ENST00000609099 FAM9AQ8IZU1 332 aaPredicted RBP14.43□□□□□ -0.1
LINC01396-201ENST00000609099 ALKQ9UM73 1620 aa14.43□□□□□ -0.1
LINC01396-201ENST00000609099 PRXQ9BXM0 1461 aa14.43□□□□□ -0.1
LINC01396-201ENST00000609099 ATP10AO60312 1499 aa14.42□□□□□ -0.1
LINC01396-201ENST00000609099 ZNF335Q9H4Z2 1342 aaPredicted RBP14.41□□□□□ -0.1
LINC01396-201ENST00000609099 C9orf84Q5VXU9 1444 aa14.41□□□□□ -0.1
LINC01396-201ENST00000609099 SRCAPQ6ZRS2 3230 aa14.41□□□□□ -0.1
LINC01396-201ENST00000609099 UBAP1LF5GYI3 381 aa14.41□□□□□ -0.1
LINC01396-201ENST00000609099 DIP2CQ9Y2E4 1556 aa14.39□□□□□ -0.11
LINC01396-201ENST00000609099 HSPA1LP34931 641 aa14.38□□□□□ -0.11
LINC01396-201ENST00000609099 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
LINC01396-201ENST00000609099 SCAPERQ9BY12 1400 aa14.37□□□□□ -0.11
LINC01396-201ENST00000609099 ABCA6Q8N139 1617 aa14.37□□□□□ -0.11
LINC01396-201ENST00000609099 KDM5CP41229 1560 aa14.35□□□□□ -0.11
LINC01396-201ENST00000609099 RNF39Q9H2S5 420 aa14.35□□□□□ -0.11
LINC01396-201ENST00000609099 REREQ9P2R6 1566 aa14.33□□□□□ -0.12
LINC01396-201ENST00000609099 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
LINC01396-201ENST00000609099 CDK13Q14004 1512 aaKnown RBP14.31□□□□□ -0.12
LINC01396-201ENST00000609099 NCKAP5LQ9HCH0 1330 aa14.31□□□□□ -0.12
LINC01396-201ENST00000609099 PLCH2O75038 1416 aa14.3□□□□□ -0.12
LINC01396-201ENST00000609099 TRAPPC8Q9Y2L5 1435 aa14.3□□□□□ -0.12
LINC01396-201ENST00000609099 TCOF1Q13428 1488 aaKnown RBP14.3□□□□□ -0.12
LINC01396-201ENST00000609099 RGS17Q9UGC6 210 aaPredicted RBP14.29□□□□□ -0.12
LINC01396-201ENST00000609099 ZNF142P52746 1687 aaPredicted RBP14.28□□□□□ -0.12
LINC01396-201ENST00000609099 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
LINC01396-201ENST00000609099 KIF14Q15058 1648 aa14.26□□□□□ -0.13
LINC01396-201ENST00000609099 MYO3AQ8NEV4 1616 aa14.26□□□□□ -0.13
LINC01396-201ENST00000609099 AGLP35573 1532 aa14.25□□□□□ -0.13
LINC01396-201ENST00000609099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
LINC01396-201ENST00000609099 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
LINC01396-201ENST00000609099 AFAP1Q8N556 730 aa14.24□□□□□ -0.13
LINC01396-201ENST00000609099 NEURL4Q96JN8 1562 aa14.24□□□□□ -0.13
LINC01396-201ENST00000609099 MYO5CQ9NQX4 1742 aa14.24□□□□□ -0.13
LINC01396-201ENST00000609099 PLA2R1Q13018 1463 aa14.22□□□□□ -0.13
LINC01396-201ENST00000609099 ZNF518AQ6AHZ1 1483 aa14.22□□□□□ -0.13
LINC01396-201ENST00000609099 MROH2AA6NES4 1674 aa14.22□□□□□ -0.13
LINC01396-201ENST00000609099 KIDINS220Q9ULH0 1771 aa14.22□□□□□ -0.13
LINC01396-201ENST00000609099 TOM1O60784 492 aa14.21□□□□□ -0.13
LINC01396-201ENST00000609099 PIP4K2BP78356 416 aa14.21□□□□□ -0.13
LINC01396-201ENST00000609099 CEP170BQ9Y4F5 1589 aaPredicted RBP14.21□□□□□ -0.14
LINC01396-201ENST00000609099 SETD1AO15047 1707 aaKnown RBP14.19□□□□□ -0.14
LINC01396-201ENST00000609099 NPATQ14207 1427 aa14.19□□□□□ -0.14
LINC01396-201ENST00000609099 PLEKHD1A6NEE1 506 aa14.19□□□□□ -0.14
LINC01396-201ENST00000609099 ESF1Q9H501 851 aaKnown RBP14.19□□□□□ -0.14
LINC01396-201ENST00000609099 MLH3Q9UHC1 1453 aa14.18□□□□□ -0.14
LINC01396-201ENST00000609099 VWDEQ8N2E2 1590 aa14.18□□□□□ -0.14
LINC01396-201ENST00000609099 CDC42BPBQ9Y5S2 1711 aa14.18□□□□□ -0.14
LINC01396-201ENST00000609099 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
LINC01396-201ENST00000609099 PTPRKQ15262 1439 aa14.15□□□□□ -0.14
LINC01396-201ENST00000609099 SUPT6HQ7KZ85 1726 aaKnown RBP14.15□□□□□ -0.14
LINC01396-201ENST00000609099 LRRIQ1Q96JM4 1722 aa14.15□□□□□ -0.14
LINC01396-201ENST00000609099 ABCC1P33527 1531 aa14.15□□□□□ -0.14
LINC01396-201ENST00000609099 CLTCQ00610 1675 aaKnown RBP14.14□□□□□ -0.15
LINC01396-201ENST00000609099 ITSN2Q9NZM3 1697 aa14.14□□□□□ -0.15
LINC01396-201ENST00000609099 DNMT1P26358 1616 aaKnown RBP14.13□□□□□ -0.15
LINC01396-201ENST00000609099 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
LINC01396-201ENST00000609099 ZMYM3Q14202 1370 aa14.12□□□□□ -0.15
LINC01396-201ENST00000609099 CNTLNQ9NXG0 1405 aa14.12□□□□□ -0.15
LINC01396-201ENST00000609099 POLR1AO95602 1720 aaPredicted RBP14.12□□□□□ -0.15
LINC01396-201ENST00000609099 SHANK2Q9UPX8 1470 aa14.12□□□□□ -0.15
LINC01396-201ENST00000609099 CPS1P31327 1500 aa14.11□□□□□ -0.15
LINC01396-201ENST00000609099 ARHGAP5Q13017 1502 aa14.1□□□□□ -0.15
LINC01396-201ENST00000609099 PKD2Q13563 968 aa14.1□□□□□ -0.15
LINC01396-201ENST00000609099 POTEAQ6S8J7 498 aa14.1□□□□□ -0.15
LINC01396-201ENST00000609099 PLXNC1O60486 1568 aa14.09□□□□□ -0.15
LINC01396-201ENST00000609099 EFCAB2Q5VUJ9 269 aa14.09□□□□□ -0.15
LINC01396-201ENST00000609099 MYT1LQ9UL68 1186 aa14.08□□□□□ -0.16
LINC01396-201ENST00000609099 PREX2Q70Z35 1606 aa14.07□□□□□ -0.16
LINC01396-201ENST00000609099 SAMD9LQ8IVG5 1584 aa14.06□□□□□ -0.16
LINC01396-201ENST00000609099 RANGAP1P46060 587 aaPredicted RBP14.06□□□□□ -0.16
LINC01396-201ENST00000609099 A2ML1A8K2U0 1454 aa14.05□□□□□ -0.16
LINC01396-201ENST00000609099 XIRP1Q702N8 1843 aaKnown RBP14.04□□□□□ -0.16
LINC01396-201ENST00000609099 LRRC7Q96NW7 1537 aa14.03□□□□□ -0.16
LINC01396-201ENST00000609099 TROQ12816 1431 aaPredicted RBP14.02□□□□□ -0.16
LINC01396-201ENST00000609099 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
LINC01396-201ENST00000609099 CDC42BPAQ5VT25 1732 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms