RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 CAPN15O75808 1086 aa7.82□□□□□ -1.16
SSX9-202ENST00000608568 MAGI3Q5TCQ9 1506 aa7.82□□□□□ -1.16
SSX9-202ENST00000608568 MYO5CQ9NQX4 1742 aa7.81□□□□□ -1.16
SSX9-202ENST00000608568 PPARGC1BQ86YN6 1023 aaKnown RBP7.81□□□□□ -1.16
SSX9-202ENST00000608568 CDK13Q14004 1512 aaKnown RBP7.8□□□□□ -1.16
SSX9-202ENST00000608568 ARID3CA6NKF2 412 aa7.8□□□□□ -1.16
SSX9-202ENST00000608568 KIF14Q15058 1648 aa7.8□□□□□ -1.16
SSX9-202ENST00000608568 HECW2Q9P2P5 1572 aa7.8□□□□□ -1.16
SSX9-202ENST00000608568 ADAMTSL3P82987 1691 aa7.79□□□□□ -1.16
SSX9-202ENST00000608568 EFCAB5A4FU69 1503 aa7.79□□□□□ -1.16
SSX9-202ENST00000608568 BCORL1Q5H9F3 1711 aa7.79□□□□□ -1.16
SSX9-202ENST00000608568 P3H3Q8IVL6 736 aa7.79□□□□□ -1.16
SSX9-202ENST00000608568 ARHGEF40Q8TER5 1519 aa7.78□□□□□ -1.16
SSX9-202ENST00000608568 PLCB2Q00722 1185 aa7.78□□□□□ -1.16
SSX9-202ENST00000608568 TRIM26Q12899 539 aaPredicted RBP7.78□□□□□ -1.16
SSX9-202ENST00000608568 RIMS1Q86UR5 1692 aaKnown RBP7.78□□□□□ -1.16
SSX9-202ENST00000608568 CDC42BPBQ9Y5S2 1711 aa7.78□□□□□ -1.16
SSX9-202ENST00000608568 MADDQ8WXG6 1647 aa7.78□□□□□ -1.16
SSX9-202ENST00000608568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.78□□□□□ -1.16
SSX9-202ENST00000608568 EEA1Q15075 1411 aa7.78□□□□□ -1.16
SSX9-202ENST00000608568 CD109Q6YHK3 1445 aa7.78□□□□□ -1.16
SSX9-202ENST00000608568 ACIN1Q9UKV3 1341 aaKnown RBP7.78□□□□□ -1.16
SSX9-202ENST00000608568 PCF11O94913 1555 aaKnown RBP7.77□□□□□ -1.17
SSX9-202ENST00000608568 FER1L4A9Z1Z3 1794 aa7.76□□□□□ -1.17
SSX9-202ENST00000608568 CFAP74Q9C0B2 1584 aa7.76□□□□□ -1.17
SSX9-202ENST00000608568 CDC42BPAQ5VT25 1732 aa7.76□□□□□ -1.17
SSX9-202ENST00000608568 CENPBP07199 599 aaPredicted RBP7.76□□□□□ -1.17
SSX9-202ENST00000608568 HECW1Q76N89 1606 aa7.76□□□□□ -1.17
SSX9-202ENST00000608568 ARAP3Q8WWN8 1544 aa7.76□□□□□ -1.17
SSX9-202ENST00000608568 FAM9AQ8IZU1 332 aaPredicted RBP7.75□□□□□ -1.17
SSX9-202ENST00000608568 ARHGAP35Q9NRY4 1499 aa7.75□□□□□ -1.17
SSX9-202ENST00000608568 SPINK5Q9NQ38 1064 aaPredicted RBP7.74□□□□□ -1.17
SSX9-202ENST00000608568 U3KPZ7 1027 aaPredicted RBP7.74□□□□□ -1.17
SSX9-202ENST00000608568 RANGAP1P46060 587 aaPredicted RBP7.73□□□□□ -1.17
SSX9-202ENST00000608568 KCNH8Q96L42 1107 aa7.73□□□□□ -1.17
SSX9-202ENST00000608568 ITSN2Q9NZM3 1697 aa7.73□□□□□ -1.17
SSX9-202ENST00000608568 ZMYM4Q5VZL5 1548 aa7.73□□□□□ -1.17
SSX9-202ENST00000608568 PREX2Q70Z35 1606 aa7.72□□□□□ -1.17
SSX9-202ENST00000608568 NEO1Q92859 1461 aa7.71□□□□□ -1.18
SSX9-202ENST00000608568 ERICH6Q7L0X2 663 aa7.7□□□□□ -1.18
SSX9-202ENST00000608568 ABCA6Q8N139 1617 aa7.7□□□□□ -1.18
SSX9-202ENST00000608568 BCANQ96GW7 911 aa7.68□□□□□ -1.18
SSX9-202ENST00000608568 FANCAO15360 1455 aa7.68□□□□□ -1.18
SSX9-202ENST00000608568 ZFYVE16Q7Z3T8 1539 aa7.68□□□□□ -1.18
SSX9-202ENST00000608568 KIDINS220Q9ULH0 1771 aa7.67□□□□□ -1.18
SSX9-202ENST00000608568 FBXO3Q9UK99 471 aa7.67□□□□□ -1.18
SSX9-202ENST00000608568 KDM5CP41229 1560 aa7.67□□□□□ -1.18
SSX9-202ENST00000608568 DIP2CQ9Y2E4 1556 aa7.67□□□□□ -1.18
SSX9-202ENST00000608568 RAPGEF3O95398 923 aa7.66□□□□□ -1.18
SSX9-202ENST00000608568 HAP1P54257 671 aaPredicted RBP7.66□□□□□ -1.18
SSX9-202ENST00000608568 ATF5Q9Y2D1 282 aaPredicted RBP7.66□□□□□ -1.18
SSX9-202ENST00000608568 CLSPNQ9HAW4 1339 aa7.66□□□□□ -1.18
SSX9-202ENST00000608568 YEATS2Q9ULM3 1422 aa7.66□□□□□ -1.18
SSX9-202ENST00000608568 C3P01024 1663 aa7.65□□□□□ -1.18
SSX9-202ENST00000608568 PTPRMP28827 1452 aa7.65□□□□□ -1.18
SSX9-202ENST00000608568 ABCC1P33527 1531 aa7.65□□□□□ -1.18
SSX9-202ENST00000608568 AKNAQ7Z591 1439 aa7.65□□□□□ -1.18
SSX9-202ENST00000608568 PREX1Q8TCU6 1659 aa7.64□□□□□ -1.19
SSX9-202ENST00000608568 SAMD9LQ8IVG5 1584 aa7.64□□□□□ -1.19
SSX9-202ENST00000608568 DENND4BO75064 1496 aaPredicted RBP7.64□□□□□ -1.19
SSX9-202ENST00000608568 POGZQ7Z3K3 1410 aa7.64□□□□□ -1.19
SSX9-202ENST00000608568 APLP2Q06481 763 aa7.64□□□□□ -1.19
SSX9-202ENST00000608568 STRCQ7RTU9 1775 aa7.63□□□□□ -1.19
SSX9-202ENST00000608568 SUPT6HQ7KZ85 1726 aaKnown RBP7.63□□□□□ -1.19
SSX9-202ENST00000608568 ADGBQ8N7X0 1667 aa7.63□□□□□ -1.19
SSX9-202ENST00000608568 ARHGAP5Q13017 1502 aa7.62□□□□□ -1.19
SSX9-202ENST00000608568 LMTK3Q96Q04 1460 aa7.62□□□□□ -1.19
SSX9-202ENST00000608568 FMN1Q68DA7 1419 aa7.62□□□□□ -1.19
SSX9-202ENST00000608568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.62□□□□□ -1.19
SSX9-202ENST00000608568 HNRNPUL2Q1KMD3 747 aaKnown RBP7.62□□□□□ -1.19
SSX9-202ENST00000608568 ARHGEF12Q9NZN5 1544 aa7.62□□□□□ -1.19
SSX9-202ENST00000608568 TROQ12816 1431 aaPredicted RBP7.61□□□□□ -1.19
SSX9-202ENST00000608568 SETD1BQ9UPS6 1966 aaKnown RBP7.61□□□□□ -1.19
SSX9-202ENST00000608568 FYCO1Q9BQS8 1478 aa7.61□□□□□ -1.19
SSX9-202ENST00000608568 PLCH2O75038 1416 aa7.61□□□□□ -1.19
SSX9-202ENST00000608568 TIAM1Q13009 1591 aa7.6□□□□□ -1.19
SSX9-202ENST00000608568 INO80Q9ULG1 1556 aaPredicted RBP7.6□□□□□ -1.19
SSX9-202ENST00000608568 PRKCSHP14314 528 aaPredicted RBP7.6□□□□□ -1.19
SSX9-202ENST00000608568 VSIG10Q8N0Z9 540 aa7.6□□□□□ -1.19
SSX9-202ENST00000608568 ZNF219Q9P2Y4 722 aaPredicted RBP7.6□□□□□ -1.19
SSX9-202ENST00000608568 GTF3C3Q9Y5Q9 886 aa7.6□□□□□ -1.19
SSX9-202ENST00000608568 SYCP2Q9BX26 1530 aa7.6□□□□□ -1.19
SSX9-202ENST00000608568 CASKIN1Q8WXD9 1431 aa7.6□□□□□ -1.19
SSX9-202ENST00000608568 PHLDB1Q86UU1 1377 aa7.59□□□□□ -1.19
SSX9-202ENST00000608568 REREQ9P2R6 1566 aa7.59□□□□□ -1.19
SSX9-202ENST00000608568 UBTFP17480 764 aaKnown RBP7.59□□□□□ -1.19
SSX9-202ENST00000608568 NEUROD1Q13562 356 aa7.59□□□□□ -1.19
SSX9-202ENST00000608568 SAMD1Q6SPF0 538 aaPredicted RBP7.59□□□□□ -1.19
SSX9-202ENST00000608568 BCL11AQ9H165 835 aa7.59□□□□□ -1.19
SSX9-202ENST00000608568 TAOK2Q9UL54 1235 aa7.59□□□□□ -1.19
SSX9-202ENST00000608568 CCDC18Q5T9S5 1454 aa7.59□□□□□ -1.19
SSX9-202ENST00000608568 SCAPERQ9BY12 1400 aa7.59□□□□□ -1.19
SSX9-202ENST00000608568 CLTCQ00610 1675 aaKnown RBP7.58□□□□□ -1.2
SSX9-202ENST00000608568 RBM42Q9BTD8 480 aaKnown RBP7.58□□□□□ -1.2
SSX9-202ENST00000608568 CFAP65Q6ZU64 1925 aaKnown RBP7.58□□□□□ -1.2
SSX9-202ENST00000608568 MROH2AA6NES4 1674 aa7.57□□□□□ -1.2
SSX9-202ENST00000608568 ZNF518AQ6AHZ1 1483 aa7.56□□□□□ -1.2
SSX9-202ENST00000608568 MAGI2Q86UL8 1455 aa7.56□□□□□ -1.2
SSX9-202ENST00000608568 PLXNC1O60486 1568 aa7.56□□□□□ -1.2
SSX9-202ENST00000608568 CLIP1P30622 1438 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms