RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 CCDC184Q52MB2 194 aa16.83■□□□□ 0.28
CTCFL-218ENST00000608440 RRAGDQ9NQL2 400 aaPredicted RBP16.83■□□□□ 0.28
CTCFL-218ENST00000608440 GRIN2AQ12879 1464 aa16.82■□□□□ 0.28
CTCFL-218ENST00000608440 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
CTCFL-218ENST00000608440 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
CTCFL-218ENST00000608440 HSP90AA1P07900 732 aaKnown RBP16.8■□□□□ 0.28
CTCFL-218ENST00000608440 SLC4A3P48751 1232 aa16.8■□□□□ 0.28
CTCFL-218ENST00000608440 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
CTCFL-218ENST00000608440 KANK4Q5T7N3 995 aaPredicted RBP16.79■□□□□ 0.28
CTCFL-218ENST00000608440 IQGAP2Q13576 1575 aa16.78■□□□□ 0.28
CTCFL-218ENST00000608440 MAPKBP1O60336 1514 aa16.78■□□□□ 0.28
CTCFL-218ENST00000608440 RRP9O43818 475 aaKnown RBP16.78■□□□□ 0.28
CTCFL-218ENST00000608440 AAMPQ13685 434 aa16.77■□□□□ 0.28
CTCFL-218ENST00000608440 PDE4AP27815 886 aa16.77■□□□□ 0.28
CTCFL-218ENST00000608440 RAB3GAP2Q9H2M9 1393 aa16.76■□□□□ 0.27
CTCFL-218ENST00000608440 FGD1P98174 961 aa16.76■□□□□ 0.27
CTCFL-218ENST00000608440 AKNAQ7Z591 1439 aa16.75■□□□□ 0.27
CTCFL-218ENST00000608440 SAMD9Q5K651 1589 aa16.75■□□□□ 0.27
CTCFL-218ENST00000608440 PCF11O94913 1555 aaKnown RBP16.75■□□□□ 0.27
CTCFL-218ENST00000608440 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
CTCFL-218ENST00000608440 PDE4CQ08493 712 aa16.73■□□□□ 0.27
CTCFL-218ENST00000608440 CEP170Q5SW79 1584 aa16.72■□□□□ 0.27
CTCFL-218ENST00000608440 KIAA0586Q9BVV6 1533 aa16.72■□□□□ 0.27
CTCFL-218ENST00000608440 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.27
CTCFL-218ENST00000608440 SENP3-EIF4A1A0A087X0R7 540 aa16.71■□□□□ 0.27
CTCFL-218ENST00000608440 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
CTCFL-218ENST00000608440 ZBED9Q6R2W3 1325 aa16.7■□□□□ 0.26
CTCFL-218ENST00000608440 BACH2Q9BYV9 841 aa16.69■□□□□ 0.26
CTCFL-218ENST00000608440 FMN1Q68DA7 1419 aa16.69■□□□□ 0.26
CTCFL-218ENST00000608440 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
CTCFL-218ENST00000608440 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
CTCFL-218ENST00000608440 UGGT2Q9NYU1 1516 aa16.67■□□□□ 0.26
CTCFL-218ENST00000608440 NUP160Q12769 1436 aa16.67■□□□□ 0.26
CTCFL-218ENST00000608440 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
CTCFL-218ENST00000608440 CASKIN1Q8WXD9 1431 aa16.66■□□□□ 0.26
CTCFL-218ENST00000608440 TCERG1O14776 1098 aaKnown RBP16.66■□□□□ 0.26
CTCFL-218ENST00000608440 ARXQ96QS3 562 aa16.66■□□□□ 0.26
CTCFL-218ENST00000608440 TIAM1Q13009 1591 aa16.65■□□□□ 0.26
CTCFL-218ENST00000608440 DDRGK1Q96HY6 314 aa16.65■□□□□ 0.26
CTCFL-218ENST00000608440 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
CTCFL-218ENST00000608440 DISP1Q96F81 1524 aa16.63■□□□□ 0.25
CTCFL-218ENST00000608440 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
CTCFL-218ENST00000608440 CHD1O14646 1710 aa16.61■□□□□ 0.25
CTCFL-218ENST00000608440 KIAA0556O60303 1618 aa16.61■□□□□ 0.25
CTCFL-218ENST00000608440 RGS3P49796 1198 aa16.61■□□□□ 0.25
CTCFL-218ENST00000608440 BCL11BQ9C0K0 894 aaPredicted RBP16.6■□□□□ 0.25
CTCFL-218ENST00000608440 CFAP43Q8NDM7 1665 aa16.6■□□□□ 0.25
CTCFL-218ENST00000608440 MAP3K1Q13233 1512 aa16.59■□□□□ 0.25
CTCFL-218ENST00000608440 SKAP1Q86WV1 359 aa16.59■□□□□ 0.25
CTCFL-218ENST00000608440 LRRC9Q6ZRR7 1453 aa16.58■□□□□ 0.25
CTCFL-218ENST00000608440 JPH4Q96JJ6 628 aa16.58■□□□□ 0.24
CTCFL-218ENST00000608440 POGKQ9P215 609 aa16.57■□□□□ 0.24
CTCFL-218ENST00000608440 CNGB1Q14028 1251 aaPredicted RBP16.57■□□□□ 0.24
CTCFL-218ENST00000608440 NUDCQ9Y266 331 aa16.57■□□□□ 0.24
CTCFL-218ENST00000608440 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
CTCFL-218ENST00000608440 PRDM4Q9UKN5 801 aa16.54■□□□□ 0.24
CTCFL-218ENST00000608440 EXOC6Q8TAG9 804 aa16.54■□□□□ 0.24
CTCFL-218ENST00000608440 RNF123Q5XPI4 1314 aa16.53■□□□□ 0.24
CTCFL-218ENST00000608440 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
CTCFL-218ENST00000608440 SETD5Q9C0A6 1442 aa16.53■□□□□ 0.24
CTCFL-218ENST00000608440 LRRIQ1Q96JM4 1722 aa16.53■□□□□ 0.24
CTCFL-218ENST00000608440 PDIA4P13667 645 aaKnown RBP16.53■□□□□ 0.24
CTCFL-218ENST00000608440 PRKRIP1Q9H875 184 aaPredicted RBP16.53■□□□□ 0.24
CTCFL-218ENST00000608440 TONSLQ96HA7 1378 aa16.52■□□□□ 0.24
CTCFL-218ENST00000608440 CARMIL2Q6F5E8 1435 aa16.52■□□□□ 0.24
CTCFL-218ENST00000608440 HECW1Q76N89 1606 aa16.51■□□□□ 0.23
CTCFL-218ENST00000608440 MS4A1P11836 297 aa16.51■□□□□ 0.23
CTCFL-218ENST00000608440 CLCN1P35523 988 aa16.51■□□□□ 0.23
CTCFL-218ENST00000608440 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
CTCFL-218ENST00000608440 MTUS2Q5JR59 1369 aa16.5■□□□□ 0.23
CTCFL-218ENST00000608440 CDK13Q14004 1512 aaKnown RBP16.49■□□□□ 0.23
CTCFL-218ENST00000608440 PRG4Q92954 1404 aaPredicted RBP16.49■□□□□ 0.23
CTCFL-218ENST00000608440 PHLDB1Q86UU1 1377 aa16.48■□□□□ 0.23
CTCFL-218ENST00000608440 EPRSP07814 1512 aaKnown RBP16.47■□□□□ 0.23
CTCFL-218ENST00000608440 CALD1Q05682 793 aaKnown RBP16.47■□□□□ 0.23
CTCFL-218ENST00000608440 L1TD1Q5T7N2 865 aaKnown RBP16.47■□□□□ 0.23
CTCFL-218ENST00000608440 CCDC18Q5T9S5 1454 aa16.47■□□□□ 0.23
CTCFL-218ENST00000608440 PLB1Q6P1J6 1458 aa16.47■□□□□ 0.23
CTCFL-218ENST00000608440 HSPA5P11021 654 aaKnown RBP16.46■□□□□ 0.22
CTCFL-218ENST00000608440 PDCL3Q9H2J4 239 aa16.45■□□□□ 0.22
CTCFL-218ENST00000608440 NUP153P49790 1475 aaKnown RBP16.45■□□□□ 0.22
CTCFL-218ENST00000608440 RAPGEF6Q8TEU7 1601 aa16.45■□□□□ 0.22
CTCFL-218ENST00000608440 FAM50AQ14320 339 aaKnown RBP16.44■□□□□ 0.22
CTCFL-218ENST00000608440 MAGI3Q5TCQ9 1506 aa16.44■□□□□ 0.22
CTCFL-218ENST00000608440 PANK2Q9BZ23 570 aa16.43■□□□□ 0.22
CTCFL-218ENST00000608440 EHBP1L1Q8N3D4 1523 aa16.41■□□□□ 0.22
CTCFL-218ENST00000608440 XRCC6P12956 609 aaKnown RBP eCLIP16.41■□□□□ 0.22
CTCFL-218ENST00000608440 SHROOM2Q13796 1616 aa16.4■□□□□ 0.22
CTCFL-218ENST00000608440 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
CTCFL-218ENST00000608440 ERCC6L2Q5T890 1561 aa16.4■□□□□ 0.22
CTCFL-218ENST00000608440 CNTLNQ9NXG0 1405 aa16.39■□□□□ 0.21
CTCFL-218ENST00000608440 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
CTCFL-218ENST00000608440 NCOA2Q15596 1464 aa16.39■□□□□ 0.21
CTCFL-218ENST00000608440 PTPRGP23470 1445 aa16.38■□□□□ 0.21
CTCFL-218ENST00000608440 BBXQ8WY36 941 aaPredicted RBP16.38■□□□□ 0.21
CTCFL-218ENST00000608440 SUPT6HQ7KZ85 1726 aaKnown RBP16.35■□□□□ 0.21
CTCFL-218ENST00000608440 GZF1Q9H116 711 aaPredicted RBP16.35■□□□□ 0.21
CTCFL-218ENST00000608440 CENPJQ9HC77 1338 aaPredicted RBP16.35■□□□□ 0.21
CTCFL-218ENST00000608440 ABCA8O94911 1581 aa16.35■□□□□ 0.21
CTCFL-218ENST00000608440 GOLGA6L3A6NEY3 463 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms