RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.19
CTCFL-217ENST00000608425 CCER2I3L3R5 266 aa16.21■□□□□ 0.18
CTCFL-217ENST00000608425 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
CTCFL-217ENST00000608425 UGGT2Q9NYU1 1516 aa16.18■□□□□ 0.18
CTCFL-217ENST00000608425 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
CTCFL-217ENST00000608425 CCDC18Q5T9S5 1454 aa16.17■□□□□ 0.18
CTCFL-217ENST00000608425 HECW1Q76N89 1606 aa16.17■□□□□ 0.18
CTCFL-217ENST00000608425 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
CTCFL-217ENST00000608425 SUPT6HQ7KZ85 1726 aaKnown RBP16.15■□□□□ 0.18
CTCFL-217ENST00000608425 GSE1Q14687 1217 aa16.14■□□□□ 0.17
CTCFL-217ENST00000608425 FRAT1Q92837 279 aaPredicted RBP16.13■□□□□ 0.17
CTCFL-217ENST00000608425 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
CTCFL-217ENST00000608425 KIAA0586Q9BVV6 1533 aa16.12■□□□□ 0.17
CTCFL-217ENST00000608425 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
CTCFL-217ENST00000608425 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
CTCFL-217ENST00000608425 ATP1B4Q9UN42 357 aaPredicted RBP16.12■□□□□ 0.17
CTCFL-217ENST00000608425 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
CTCFL-217ENST00000608425 SETD5Q9C0A6 1442 aa16.1■□□□□ 0.17
CTCFL-217ENST00000608425 RAB3GAP2Q9H2M9 1393 aa16.1■□□□□ 0.17
CTCFL-217ENST00000608425 USP35Q9P2H5 1018 aa16.1■□□□□ 0.17
CTCFL-217ENST00000608425 ARHGEF11O15085 1522 aa16.1■□□□□ 0.17
CTCFL-217ENST00000608425 DCAF11Q8TEB1 546 aa16.1■□□□□ 0.17
CTCFL-217ENST00000608425 KIAA0556O60303 1618 aa16.09■□□□□ 0.17
CTCFL-217ENST00000608425 RBM10P98175 930 aaKnown RBP16.09■□□□□ 0.17
CTCFL-217ENST00000608425 NCOA2Q15596 1464 aa16.08■□□□□ 0.16
CTCFL-217ENST00000608425 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
CTCFL-217ENST00000608425 FAM43AQ8N2R8 423 aa16.05■□□□□ 0.16
CTCFL-217ENST00000608425 EPRSP07814 1512 aaKnown RBP16.05■□□□□ 0.16
CTCFL-217ENST00000608425 SYNJ2O15056 1496 aa16.05■□□□□ 0.16
CTCFL-217ENST00000608425 MAPKBP1O60336 1514 aa16.05■□□□□ 0.16
CTCFL-217ENST00000608425 MAGI3Q5TCQ9 1506 aa16.05■□□□□ 0.16
CTCFL-217ENST00000608425 DISP1Q96F81 1524 aa16.05■□□□□ 0.16
CTCFL-217ENST00000608425 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
CTCFL-217ENST00000608425 HSP90AA2PQ14568 343 aaPredicted RBP16.01■□□□□ 0.15
CTCFL-217ENST00000608425 RRAGDQ9NQL2 400 aaPredicted RBP16.01■□□□□ 0.15
CTCFL-217ENST00000608425 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
CTCFL-217ENST00000608425 AAMPQ13685 434 aa16.01■□□□□ 0.15
CTCFL-217ENST00000608425 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
CTCFL-217ENST00000608425 CCDC184Q52MB2 194 aa15.99■□□□□ 0.15
CTCFL-217ENST00000608425 TCOF1Q13428 1488 aaKnown RBP15.99■□□□□ 0.15
CTCFL-217ENST00000608425 RAPGEF6Q8TEU7 1601 aa15.99■□□□□ 0.15
CTCFL-217ENST00000608425 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
CTCFL-217ENST00000608425 NFKBIBQ15653 356 aa15.98■□□□□ 0.15
CTCFL-217ENST00000608425 FGD1P98174 961 aa15.98■□□□□ 0.15
CTCFL-217ENST00000608425 NUP160Q12769 1436 aa15.98■□□□□ 0.15
CTCFL-217ENST00000608425 HFM1A2PYH4 1435 aa15.97■□□□□ 0.15
CTCFL-217ENST00000608425 CDK13Q14004 1512 aaKnown RBP15.97■□□□□ 0.15
CTCFL-217ENST00000608425 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
CTCFL-217ENST00000608425 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
CTCFL-217ENST00000608425 PDE4CQ08493 712 aa15.95■□□□□ 0.14
CTCFL-217ENST00000608425 MIA2Q96PC5 1412 aa15.95■□□□□ 0.14
CTCFL-217ENST00000608425 NAP1L5Q96NT1 182 aaPredicted RBP15.94■□□□□ 0.14
CTCFL-217ENST00000608425 NUP153P49790 1475 aaKnown RBP15.93■□□□□ 0.14
CTCFL-217ENST00000608425 GCC2Q8IWJ2 1684 aa15.93■□□□□ 0.14
CTCFL-217ENST00000608425 PTPRKQ15262 1439 aa15.92■□□□□ 0.14
CTCFL-217ENST00000608425 AKNAQ7Z591 1439 aa15.92■□□□□ 0.14
CTCFL-217ENST00000608425 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
CTCFL-217ENST00000608425 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
CTCFL-217ENST00000608425 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
CTCFL-217ENST00000608425 ARID4BQ4LE39 1312 aaPredicted RBP15.9■□□□□ 0.14
CTCFL-217ENST00000608425 NAIPQ13075 1403 aa15.89■□□□□ 0.13
CTCFL-217ENST00000608425 UACAQ9BZF9 1416 aa15.89■□□□□ 0.13
CTCFL-217ENST00000608425 BCL11BQ9C0K0 894 aaPredicted RBP15.88■□□□□ 0.13
CTCFL-217ENST00000608425 CARMIL2Q6F5E8 1435 aa15.88■□□□□ 0.13
CTCFL-217ENST00000608425 RRP9O43818 475 aaKnown RBP15.88■□□□□ 0.13
CTCFL-217ENST00000608425 HSP90AA1P07900 732 aaKnown RBP15.88■□□□□ 0.13
CTCFL-217ENST00000608425 ADCY10Q96PN6 1610 aa15.87■□□□□ 0.13
CTCFL-217ENST00000608425 PDE4AP27815 886 aa15.87■□□□□ 0.13
CTCFL-217ENST00000608425 FRAT2O75474 233 aaPredicted RBP15.84■□□□□ 0.13
CTCFL-217ENST00000608425 ITSN2Q9NZM3 1697 aa15.84■□□□□ 0.13
CTCFL-217ENST00000608425 RGS3P49796 1198 aa15.83■□□□□ 0.12
CTCFL-217ENST00000608425 DNMT1P26358 1616 aaKnown RBP15.82■□□□□ 0.12
CTCFL-217ENST00000608425 TROQ12816 1431 aaPredicted RBP15.82■□□□□ 0.12
CTCFL-217ENST00000608425 ABCA8O94911 1581 aa15.82■□□□□ 0.12
CTCFL-217ENST00000608425 SKAP1Q86WV1 359 aa15.81■□□□□ 0.12
CTCFL-217ENST00000608425 PLB1Q6P1J6 1458 aa15.81■□□□□ 0.12
CTCFL-217ENST00000608425 JPH4Q96JJ6 628 aa15.8■□□□□ 0.12
CTCFL-217ENST00000608425 ARXQ96QS3 562 aa15.79■□□□□ 0.12
CTCFL-217ENST00000608425 BACH2Q9BYV9 841 aa15.79■□□□□ 0.12
CTCFL-217ENST00000608425 PRDM4Q9UKN5 801 aa15.78■□□□□ 0.12
CTCFL-217ENST00000608425 CHD1O14646 1710 aa15.78■□□□□ 0.12
CTCFL-217ENST00000608425 ROCK1Q13464 1354 aa15.78■□□□□ 0.12
CTCFL-217ENST00000608425 FBLN2P98095 1184 aa15.78■□□□□ 0.12
CTCFL-217ENST00000608425 PNNQ9H307 717 aaKnown RBP15.77■□□□□ 0.11
CTCFL-217ENST00000608425 DAPK1P53355 1430 aa15.76■□□□□ 0.11
CTCFL-217ENST00000608425 PDIA4P13667 645 aaKnown RBP15.76■□□□□ 0.11
CTCFL-217ENST00000608425 KIF14Q15058 1648 aa15.75■□□□□ 0.11
CTCFL-217ENST00000608425 ZBED9Q6R2W3 1325 aa15.75■□□□□ 0.11
CTCFL-217ENST00000608425 SHROOM2Q13796 1616 aa15.74■□□□□ 0.11
CTCFL-217ENST00000608425 POGKQ9P215 609 aa15.74■□□□□ 0.11
CTCFL-217ENST00000608425 ADGBQ8N7X0 1667 aa15.73■□□□□ 0.11
CTCFL-217ENST00000608425 PRG4Q92954 1404 aaPredicted RBP15.73■□□□□ 0.11
CTCFL-217ENST00000608425 CROCC2H7BZ55 1655 aa15.73■□□□□ 0.11
CTCFL-217ENST00000608425 ARID3CA6NKF2 412 aa15.72■□□□□ 0.11
CTCFL-217ENST00000608425 KDM6BO15054 1643 aa15.72■□□□□ 0.11
CTCFL-217ENST00000608425 ABCC5O15440 1437 aa15.72■□□□□ 0.11
CTCFL-217ENST00000608425 MRS2Q9HD23 443 aa15.71■□□□□ 0.11
CTCFL-217ENST00000608425 CAMSAP2Q08AD1 1489 aa15.71■□□□□ 0.11
CTCFL-217ENST00000608425 GPATCH8Q9UKJ3 1502 aaKnown RBP15.71■□□□□ 0.11
CTCFL-217ENST00000608425 CDC42BPAQ5VT25 1732 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms