RNA–Protein interactions for RNA: ENST00000607931.1

LINC00963-209, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 473 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-209ENST00000607931 EEA1Q15075 1411 aa13.98□□□□□ -0.17
LINC00963-209ENST00000607931 AKNAQ7Z591 1439 aa13.98□□□□□ -0.17
LINC00963-209ENST00000607931 ARHGEF40Q8TER5 1519 aa13.97□□□□□ -0.17
LINC00963-209ENST00000607931 FHOD3Q2V2M9 1422 aa13.97□□□□□ -0.17
LINC00963-209ENST00000607931 LMTK3Q96Q04 1460 aa13.96□□□□□ -0.17
LINC00963-209ENST00000607931 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
LINC00963-209ENST00000607931 RIMS1Q86UR5 1692 aaKnown RBP13.94□□□□□ -0.18
LINC00963-209ENST00000607931 EFCAB5A4FU69 1503 aa13.94□□□□□ -0.18
LINC00963-209ENST00000607931 MAGI2Q86UL8 1455 aa13.93□□□□□ -0.18
LINC00963-209ENST00000607931 ZFYVE16Q7Z3T8 1539 aa13.92□□□□□ -0.18
LINC00963-209ENST00000607931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■■□□ 16.6
LINC00963-209ENST00000607931 RICTORQ6R327 1708 aa13.92□□□□□ -0.18
LINC00963-209ENST00000607931 ZMYM4Q5VZL5 1548 aa13.9□□□□□ -0.18
LINC00963-209ENST00000607931 HSPA2P54652 639 aa13.9□□□□□ -0.18
LINC00963-209ENST00000607931 MLECQ14165 292 aa13.9□□□□□ -0.18
LINC00963-209ENST00000607931 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
LINC00963-209ENST00000607931 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
LINC00963-209ENST00000607931 CDK11AQ9UQ88 783 aaPredicted RBP13.87□□□□□ -0.19
LINC00963-209ENST00000607931 SCAPERQ9BY12 1400 aa13.87□□□□□ -0.19
LINC00963-209ENST00000607931 YEATS2Q9ULM3 1422 aa13.87□□□□□ -0.19
LINC00963-209ENST00000607931 PLCH2O75038 1416 aa13.86□□□□□ -0.19
LINC00963-209ENST00000607931 EFCAB2Q5VUJ9 269 aa13.85□□□□□ -0.19
LINC00963-209ENST00000607931 CERKQ8TCT0 537 aa13.85□□□□□ -0.19
LINC00963-209ENST00000607931 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
LINC00963-209ENST00000607931 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
LINC00963-209ENST00000607931 MYT1LQ9UL68 1186 aa13.84□□□□□ -0.19
LINC00963-209ENST00000607931 CDK13Q14004 1512 aaKnown RBP13.84□□□□□ -0.19
LINC00963-209ENST00000607931 ATP10AO60312 1499 aa13.83□□□□□ -0.2
LINC00963-209ENST00000607931 C9orf84Q5VXU9 1444 aa13.82□□□□□ -0.2
LINC00963-209ENST00000607931 FMN1Q68DA7 1419 aa13.82□□□□□ -0.2
LINC00963-209ENST00000607931 FER1L4A9Z1Z3 1794 aa13.82□□□□□ -0.2
LINC00963-209ENST00000607931 UBTFP17480 764 aaKnown RBP13.81□□□□□ -0.2
LINC00963-209ENST00000607931 ZNF518AQ6AHZ1 1483 aa13.8□□□□□ -0.2
LINC00963-209ENST00000607931 CLIP1P30622 1438 aa13.79□□□□□ -0.2
LINC00963-209ENST00000607931 ARHGEF12Q9NZN5 1544 aa13.79□□□□□ -0.2
LINC00963-209ENST00000607931 ESF1Q9H501 851 aaKnown RBP13.78□□□□□ -0.2
LINC00963-209ENST00000607931 SIGLEC1Q9BZZ2 1709 aa13.78□□□□□ -0.2
LINC00963-209ENST00000607931 MYO5CQ9NQX4 1742 aa13.78□□□□□ -0.2
LINC00963-209ENST00000607931 ARHGAP5Q13017 1502 aa13.77□□□□□ -0.21
LINC00963-209ENST00000607931 KIF14Q15058 1648 aa13.77□□□□□ -0.21
LINC00963-209ENST00000607931 PREX1Q8TCU6 1659 aa13.77□□□□□ -0.21
LINC00963-209ENST00000607931 UHRF1BP1Q6BDS2 1440 aa13.76□□□□□ -0.21
LINC00963-209ENST00000607931 CEBPAP49715 358 aaPredicted RBP13.76□□□□□ -0.21
LINC00963-209ENST00000607931 TROQ12816 1431 aaPredicted RBP13.74□□□□□ -0.21
LINC00963-209ENST00000607931 AFAP1Q8N556 730 aa13.74□□□□□ -0.21
LINC00963-209ENST00000607931 KDM5CP41229 1560 aa13.71□□□□□ -0.21
LINC00963-209ENST00000607931 ARHGAP35Q9NRY4 1499 aa13.71□□□□□ -0.21
LINC00963-209ENST00000607931 DISP3Q9P2K9 1392 aa13.7□□□□□ -0.22
LINC00963-209ENST00000607931 REREQ9P2R6 1566 aa13.69□□□□□ -0.22
LINC00963-209ENST00000607931 MLH3Q9UHC1 1453 aa13.68□□□□□ -0.22
LINC00963-209ENST00000607931 DIP2CQ9Y2E4 1556 aa13.68□□□□□ -0.22
LINC00963-209ENST00000607931 PTPRTO14522 1441 aa13.66□□□□□ -0.22
LINC00963-209ENST00000607931 CCDC18Q5T9S5 1454 aa13.66□□□□□ -0.22
LINC00963-209ENST00000607931 CNTLNQ9NXG0 1405 aa13.65□□□□□ -0.22
LINC00963-209ENST00000607931 TRAPPC8Q9Y2L5 1435 aa13.65□□□□□ -0.22
LINC00963-209ENST00000607931 AGLP35573 1532 aa13.65□□□□□ -0.22
LINC00963-209ENST00000607931 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
LINC00963-209ENST00000607931 STRCQ7RTU9 1775 aa13.63□□□□□ -0.23
LINC00963-209ENST00000607931 PREX2Q70Z35 1606 aa13.63□□□□□ -0.23
LINC00963-209ENST00000607931 ABCC1P33527 1531 aa13.63□□□□□ -0.23
LINC00963-209ENST00000607931 C3P01024 1663 aa13.63□□□□□ -0.23
LINC00963-209ENST00000607931 ZNF777Q9ULD5 760 aaPredicted RBP13.61□□□□□ -0.23
LINC00963-209ENST00000607931 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
LINC00963-209ENST00000607931 SOCS7O14512 581 aa13.6□□□□□ -0.23
LINC00963-209ENST00000607931 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
LINC00963-209ENST00000607931 IQSEC2Q5JU85 1478 aa13.6□□□□□ -0.23
LINC00963-209ENST00000607931 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
LINC00963-209ENST00000607931 ITSN2Q9NZM3 1697 aa13.59□□□□□ -0.23
LINC00963-209ENST00000607931 NPATQ14207 1427 aa13.58□□□□□ -0.24
LINC00963-209ENST00000607931 NCOA1Q15788 1441 aa13.58□□□□□ -0.24
LINC00963-209ENST00000607931 SPAG9O60271 1321 aaKnown RBP13.58□□□□□ -0.24
LINC00963-209ENST00000607931 LRRIQ1Q96JM4 1722 aa13.57□□□□□ -0.24
LINC00963-209ENST00000607931 ILDR2Q71H61 639 aa13.57□□□□□ -0.24
LINC00963-209ENST00000607931 SPATA31D1Q6ZQQ2 1576 aa13.56□□□□□ -0.24
LINC00963-209ENST00000607931 ZMYM3Q14202 1370 aa13.56□□□□□ -0.24
LINC00963-209ENST00000607931 KIDINS220Q9ULH0 1771 aa13.55□□□□□ -0.24
LINC00963-209ENST00000607931 CAMSAP1Q5T5Y3 1602 aa13.55□□□□□ -0.24
LINC00963-209ENST00000607931 FYCO1Q9BQS8 1478 aa13.55□□□□□ -0.24
LINC00963-209ENST00000607931 SAMD9LQ8IVG5 1584 aa13.54□□□□□ -0.24
LINC00963-209ENST00000607931 LTBP4Q8N2S1 1624 aa13.54□□□□□ -0.24
LINC00963-209ENST00000607931 MROH2AA6NES4 1674 aa13.54□□□□□ -0.24
LINC00963-209ENST00000607931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC00963-209ENST00000607931 PLEKHH2Q8IVE3 1493 aa13.54□□□□□ -0.24
LINC00963-209ENST00000607931 HNRNPMP52272 730 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC00963-209ENST00000607931 PKD2Q13563 968 aa13.53□□□□□ -0.24
LINC00963-209ENST00000607931 CFDP1Q9UEE9 299 aaPredicted RBP13.53□□□□□ -0.24
LINC00963-209ENST00000607931 SYCP2Q9BX26 1530 aa13.53□□□□□ -0.24
LINC00963-209ENST00000607931 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
LINC00963-209ENST00000607931 ATP7AQ04656 1500 aa13.51□□□□□ -0.25
LINC00963-209ENST00000607931 GPATCH8Q9UKJ3 1502 aaKnown RBP13.51□□□□□ -0.25
LINC00963-209ENST00000607931 CCNB3Q8WWL7 1395 aa13.51□□□□□ -0.25
LINC00963-209ENST00000607931 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
LINC00963-209ENST00000607931 GGT6Q6P531 493 aa13.51□□□□□ -0.25
LINC00963-209ENST00000607931 A2MP01023 1474 aa13.5□□□□□ -0.25
LINC00963-209ENST00000607931 KIAA1107Q9UPP5 1409 aa13.5□□□□□ -0.25
LINC00963-209ENST00000607931 UBAP1LF5GYI3 381 aa13.5□□□□□ -0.25
LINC00963-209ENST00000607931 SUPT6HQ7KZ85 1726 aaKnown RBP13.5□□□□□ -0.25
LINC00963-209ENST00000607931 PLA2R1Q13018 1463 aa13.49□□□□□ -0.25
LINC00963-209ENST00000607931 ZNF335Q9H4Z2 1342 aaPredicted RBP13.49□□□□□ -0.25
LINC00963-209ENST00000607931 RNF39Q9H2S5 420 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms