RNA–Protein interactions for RNA: ENST00000606885.1

AP002856.2-202, humanhuman

TSL 1 (best) BASIC

Gene AP002856.2, Length 755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.2-202ENST00000606885 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
AP002856.2-202ENST00000606885 ABCA8O94911 1581 aa15.96■□□□□ 0.14
AP002856.2-202ENST00000606885 DENND4BO75064 1496 aaPredicted RBP15.95■□□□□ 0.14
AP002856.2-202ENST00000606885 FHOD3Q2V2M9 1422 aa15.94■□□□□ 0.14
AP002856.2-202ENST00000606885 HSPA1LP34931 641 aa15.94■□□□□ 0.14
AP002856.2-202ENST00000606885 CEBPAP49715 358 aaPredicted RBP15.93■□□□□ 0.14
AP002856.2-202ENST00000606885 MAGI2Q86UL8 1455 aa15.91■□□□□ 0.14
AP002856.2-202ENST00000606885 EFCAB5A4FU69 1503 aa15.91■□□□□ 0.14
AP002856.2-202ENST00000606885 ARHGEF12Q9NZN5 1544 aa15.91■□□□□ 0.14
AP002856.2-202ENST00000606885 RICTORQ6R327 1708 aa15.91■□□□□ 0.14
AP002856.2-202ENST00000606885 ZFYVE16Q7Z3T8 1539 aa15.89■□□□□ 0.13
AP002856.2-202ENST00000606885 FAM9AQ8IZU1 332 aaPredicted RBP15.89■□□□□ 0.13
AP002856.2-202ENST00000606885 ZMYM4Q5VZL5 1548 aa15.89■□□□□ 0.13
AP002856.2-202ENST00000606885 SIGLEC1Q9BZZ2 1709 aa15.88■□□□□ 0.13
AP002856.2-202ENST00000606885 NCOA1Q15788 1441 aa15.87■□□□□ 0.13
AP002856.2-202ENST00000606885 GOLGA3Q08378 1498 aa15.87■□□□□ 0.13
AP002856.2-202ENST00000606885 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
AP002856.2-202ENST00000606885 TOM1O60784 492 aa15.85■□□□□ 0.13
AP002856.2-202ENST00000606885 ZNF335Q9H4Z2 1342 aaPredicted RBP15.84■□□□□ 0.13
AP002856.2-202ENST00000606885 ATP10BO94823 1461 aa15.84■□□□□ 0.13
AP002856.2-202ENST00000606885 PIP4K2BP78356 416 aa15.81■□□□□ 0.12
AP002856.2-202ENST00000606885 SLC4A1APQ9BWU0 796 aaKnown RBP15.81■□□□□ 0.12
AP002856.2-202ENST00000606885 ATP10AO60312 1499 aa15.79■□□□□ 0.12
AP002856.2-202ENST00000606885 CFAP74Q9C0B2 1584 aa15.79■□□□□ 0.12
AP002856.2-202ENST00000606885 TRAPPC8Q9Y2L5 1435 aa15.78■□□□□ 0.12
AP002856.2-202ENST00000606885 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
AP002856.2-202ENST00000606885 C9orf84Q5VXU9 1444 aa15.77■□□□□ 0.12
AP002856.2-202ENST00000606885 ARID3CA6NKF2 412 aa15.77■□□□□ 0.12
AP002856.2-202ENST00000606885 PKD2Q13563 968 aa15.74■□□□□ 0.11
AP002856.2-202ENST00000606885 HECW1Q76N89 1606 aa15.74■□□□□ 0.11
AP002856.2-202ENST00000606885 RGS17Q9UGC6 210 aaPredicted RBP15.73■□□□□ 0.11
AP002856.2-202ENST00000606885 CAMSAP1Q5T5Y3 1602 aa15.72■□□□□ 0.11
AP002856.2-202ENST00000606885 NCKAP5LQ9HCH0 1330 aa15.71■□□□□ 0.11
AP002856.2-202ENST00000606885 ESF1Q9H501 851 aaKnown RBP15.71■□□□□ 0.11
AP002856.2-202ENST00000606885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.7■□□□□ 0.1
AP002856.2-202ENST00000606885 HNRNPUL2Q1KMD3 747 aaKnown RBP15.7■□□□□ 0.1
AP002856.2-202ENST00000606885 C3P01024 1663 aa15.7■□□□□ 0.1
AP002856.2-202ENST00000606885 SRCAPQ6ZRS2 3230 aa15.67■□□□□ 0.1
AP002856.2-202ENST00000606885 PTPRKQ15262 1439 aa15.67■□□□□ 0.1
AP002856.2-202ENST00000606885 PLA2R1Q13018 1463 aa15.65■□□□□ 0.1
AP002856.2-202ENST00000606885 CTTNBP2Q8WZ74 1663 aa15.65■□□□□ 0.1
AP002856.2-202ENST00000606885 CPS1P31327 1500 aa15.64■□□□□ 0.09
AP002856.2-202ENST00000606885 PLEKHD1A6NEE1 506 aa15.64■□□□□ 0.09
AP002856.2-202ENST00000606885 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
AP002856.2-202ENST00000606885 SCAPERQ9BY12 1400 aa15.64■□□□□ 0.09
AP002856.2-202ENST00000606885 NPATQ14207 1427 aa15.62■□□□□ 0.09
AP002856.2-202ENST00000606885 CNTLNQ9NXG0 1405 aa15.61■□□□□ 0.09
AP002856.2-202ENST00000606885 TCOF1Q13428 1488 aaKnown RBP15.6■□□□□ 0.09
AP002856.2-202ENST00000606885 POTEAQ6S8J7 498 aa15.6■□□□□ 0.09
AP002856.2-202ENST00000606885 AGLP35573 1532 aa15.58■□□□□ 0.08
AP002856.2-202ENST00000606885 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.58■□□□□ 0.08
AP002856.2-202ENST00000606885 REREQ9P2R6 1566 aa15.56■□□□□ 0.08
AP002856.2-202ENST00000606885 RAPGEF6Q8TEU7 1601 aa15.56■□□□□ 0.08
AP002856.2-202ENST00000606885 SUPT5HO00267 1087 aaKnown RBP15.55■□□□□ 0.08
AP002856.2-202ENST00000606885 SHANK2Q9UPX8 1470 aa15.54■□□□□ 0.08
AP002856.2-202ENST00000606885 ZNF518AQ6AHZ1 1483 aa15.52■□□□□ 0.08
AP002856.2-202ENST00000606885 PLCH2O75038 1416 aa15.52■□□□□ 0.08
AP002856.2-202ENST00000606885 SUPT6HQ7KZ85 1726 aaKnown RBP15.52■□□□□ 0.08
AP002856.2-202ENST00000606885 P3H3Q8IVL6 736 aa15.52■□□□□ 0.08
AP002856.2-202ENST00000606885 UPF1Q92900 1129 aaKnown RBP eCLIP15.52■□□□□ 0.08
AP002856.2-202ENST00000606885 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
AP002856.2-202ENST00000606885 MYT1LQ9UL68 1186 aa15.51■□□□□ 0.07
AP002856.2-202ENST00000606885 ZNF142P52746 1687 aaPredicted RBP15.51■□□□□ 0.07
AP002856.2-202ENST00000606885 ALKQ9UM73 1620 aa15.5■□□□□ 0.07
AP002856.2-202ENST00000606885 EFCAB2Q5VUJ9 269 aa15.5■□□□□ 0.07
AP002856.2-202ENST00000606885 NUP153P49790 1475 aaKnown RBP15.5■□□□□ 0.07
AP002856.2-202ENST00000606885 ZMYM3Q14202 1370 aa15.49■□□□□ 0.07
AP002856.2-202ENST00000606885 MROH2AA6NES4 1674 aa15.48■□□□□ 0.07
AP002856.2-202ENST00000606885 KDM5CP41229 1560 aa15.46■□□□□ 0.07
AP002856.2-202ENST00000606885 DIP2CQ9Y2E4 1556 aa15.46■□□□□ 0.07
AP002856.2-202ENST00000606885 CEP170BQ9Y4F5 1589 aaPredicted RBP15.46■□□□□ 0.07
AP002856.2-202ENST00000606885 AFAP1Q8N556 730 aa15.45■□□□□ 0.06
AP002856.2-202ENST00000606885 SETD1AO15047 1707 aaKnown RBP15.45■□□□□ 0.06
AP002856.2-202ENST00000606885 MYO3AQ8NEV4 1616 aa15.43■□□□□ 0.06
AP002856.2-202ENST00000606885 MLH3Q9UHC1 1453 aa15.42■□□□□ 0.06
AP002856.2-202ENST00000606885 ABCA6Q8N139 1617 aa15.39■□□□□ 0.05
AP002856.2-202ENST00000606885 VWDEQ8N2E2 1590 aa15.37■□□□□ 0.05
AP002856.2-202ENST00000606885 POLR1AO95602 1720 aaPredicted RBP15.37■□□□□ 0.05
AP002856.2-202ENST00000606885 SAMD9Q5K651 1589 aa15.36■□□□□ 0.05
AP002856.2-202ENST00000606885 RNF17Q9BXT8 1623 aaKnown RBP15.36■□□□□ 0.05
AP002856.2-202ENST00000606885 A2ML1A8K2U0 1454 aa15.36■□□□□ 0.05
AP002856.2-202ENST00000606885 ANKLE2Q86XL3 938 aa15.35■□□□□ 0.05
AP002856.2-202ENST00000606885 MYO5CQ9NQX4 1742 aa15.34■□□□□ 0.05
AP002856.2-202ENST00000606885 NEURL4Q96JN8 1562 aa15.34■□□□□ 0.05
AP002856.2-202ENST00000606885 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
AP002856.2-202ENST00000606885 DNMT1P26358 1616 aaKnown RBP15.34■□□□□ 0.05
AP002856.2-202ENST00000606885 LRRC7Q96NW7 1537 aa15.33■□□□□ 0.04
AP002856.2-202ENST00000606885 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
AP002856.2-202ENST00000606885 ZBTB22O15209 634 aa15.31■□□□□ 0.04
AP002856.2-202ENST00000606885 PRXQ9BXM0 1461 aa15.31■□□□□ 0.04
AP002856.2-202ENST00000606885 FAM135BQ49AJ0 1406 aa15.3■□□□□ 0.04
AP002856.2-202ENST00000606885 SYNMO15061 1565 aa15.28■□□□□ 0.04
AP002856.2-202ENST00000606885 ARHGAP5Q13017 1502 aa15.27■□□□□ 0.04
AP002856.2-202ENST00000606885 MED14O60244 1454 aa15.27■□□□□ 0.04
AP002856.2-202ENST00000606885 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
AP002856.2-202ENST00000606885 CLTCQ00610 1675 aaKnown RBP15.27■□□□□ 0.03
AP002856.2-202ENST00000606885 NPHP4O75161 1426 aaPredicted RBP15.26■□□□□ 0.03
AP002856.2-202ENST00000606885 ZNF772Q68DY9 489 aaPredicted RBP15.26■□□□□ 0.03
AP002856.2-202ENST00000606885 THEMISQ8N1K5 641 aaPredicted RBP15.26■□□□□ 0.03
AP002856.2-202ENST00000606885 TRIM52Q96A61 297 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms