RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 CDK11AQ9UQ88 783 aaPredicted RBP31.77■■■□□ 2.68
PPFIA3-210ENST00000602800 RIMS1Q86UR5 1692 aaKnown RBP31.76■■■□□ 2.68
PPFIA3-210ENST00000602800 MLECQ14165 292 aa31.74■■■□□ 2.67
PPFIA3-210ENST00000602800 EFCAB2Q5VUJ9 269 aa31.73■■■□□ 2.67
PPFIA3-210ENST00000602800 HECW1Q76N89 1606 aa31.71■■■□□ 2.67
PPFIA3-210ENST00000602800 HSPA2P54652 639 aa31.69■■■□□ 2.66
PPFIA3-210ENST00000602800 ARHGAP35Q9NRY4 1499 aa31.66■■■□□ 2.66
PPFIA3-210ENST00000602800 ATP10AO60312 1499 aa31.63■■■□□ 2.65
PPFIA3-210ENST00000602800 SIGLEC1Q9BZZ2 1709 aa31.61■■■□□ 2.65
PPFIA3-210ENST00000602800 C9orf84Q5VXU9 1444 aa31.6■■■□□ 2.65
PPFIA3-210ENST00000602800 TROQ12816 1431 aaPredicted RBP31.59■■■□□ 2.65
PPFIA3-210ENST00000602800 CLIP1P30622 1438 aa31.58■■■□□ 2.65
PPFIA3-210ENST00000602800 CHIC1Q5VXU3 224 aa31.56■■■□□ 2.64
PPFIA3-210ENST00000602800 KIF14Q15058 1648 aa31.56■■■□□ 2.64
PPFIA3-210ENST00000602800 MYO5CQ9NQX4 1742 aa31.55■■■□□ 2.64
PPFIA3-210ENST00000602800 ZNF518AQ6AHZ1 1483 aa31.55■■■□□ 2.64
PPFIA3-210ENST00000602800 MYT1LQ9UL68 1186 aa31.54■■■□□ 2.64
PPFIA3-210ENST00000602800 ARHGAP5Q13017 1502 aa31.54■■■□□ 2.64
PPFIA3-210ENST00000602800 AFAP1Q8N556 730 aa31.53■■■□□ 2.64
PPFIA3-210ENST00000602800 ARHGEF12Q9NZN5 1544 aa31.52■■■□□ 2.64
PPFIA3-210ENST00000602800 FER1L4A9Z1Z3 1794 aa31.52■■■□□ 2.64
PPFIA3-210ENST00000602800 CEBPAP49715 358 aaPredicted RBP31.47■■■□□ 2.63
PPFIA3-210ENST00000602800 KDM5CP41229 1560 aa31.43■■■□□ 2.62
PPFIA3-210ENST00000602800 CERKQ8TCT0 537 aa31.43■■■□□ 2.62
PPFIA3-210ENST00000602800 CASKIN1Q8WXD9 1431 aa31.37■■■□□ 2.61
PPFIA3-210ENST00000602800 CCDC18Q5T9S5 1454 aa31.37■■■□□ 2.61
PPFIA3-210ENST00000602800 MLH3Q9UHC1 1453 aa31.36■■■□□ 2.61
PPFIA3-210ENST00000602800 ESF1Q9H501 851 aaKnown RBP31.35■■■□□ 2.61
PPFIA3-210ENST00000602800 DMRT2Q9Y5R5 561 aa31.34■■■□□ 2.61
PPFIA3-210ENST00000602800 DIP2CQ9Y2E4 1556 aa31.34■■■□□ 2.61
PPFIA3-210ENST00000602800 UHRF1BP1Q6BDS2 1440 aa31.33■■■□□ 2.61
PPFIA3-210ENST00000602800 PREX1Q8TCU6 1659 aa31.33■■■□□ 2.61
PPFIA3-210ENST00000602800 TRAPPC8Q9Y2L5 1435 aa31.32■■■□□ 2.61
PPFIA3-210ENST00000602800 LRRIQ1Q96JM4 1722 aa31.31■■■□□ 2.6
PPFIA3-210ENST00000602800 REREQ9P2R6 1566 aa31.3■■■□□ 2.6
PPFIA3-210ENST00000602800 CDC42BPBQ9Y5S2 1711 aa31.29■■■□□ 2.6
PPFIA3-210ENST00000602800 ABCC1P33527 1531 aa31.29■■■□□ 2.6
PPFIA3-210ENST00000602800 PREX2Q70Z35 1606 aa31.27■■■□□ 2.6
PPFIA3-210ENST00000602800 ABCA6Q8N139 1617 aa31.26■■■□□ 2.59
PPFIA3-210ENST00000602800 AGLP35573 1532 aa31.25■■■□□ 2.59
PPFIA3-210ENST00000602800 ZNF777Q9ULD5 760 aaPredicted RBP31.23■■■□□ 2.59
PPFIA3-210ENST00000602800 SETD1BQ9UPS6 1966 aaKnown RBP31.21■■■□□ 2.59
PPFIA3-210ENST00000602800 FYCO1Q9BQS8 1478 aa31.21■■■□□ 2.59
PPFIA3-210ENST00000602800 ITSN2Q9NZM3 1697 aa31.18■■■□□ 2.58
PPFIA3-210ENST00000602800 CNTLNQ9NXG0 1405 aa31.16■■■□□ 2.58
PPFIA3-210ENST00000602800 SPAG9O60271 1321 aaKnown RBP31.13■■■□□ 2.57
PPFIA3-210ENST00000602800 C3P01024 1663 aa31.13■■■□□ 2.57
PPFIA3-210ENST00000602800 STRCQ7RTU9 1775 aa31.12■■■□□ 2.57
PPFIA3-210ENST00000602800 KIDINS220Q9ULH0 1771 aa31.12■■■□□ 2.57
PPFIA3-210ENST00000602800 PTPRTO14522 1441 aa31.11■■■□□ 2.57
PPFIA3-210ENST00000602800 HNRNPMP52272 730 aaKnown RBP eCLIP31.11■■■□□ 2.57
PPFIA3-210ENST00000602800 CDC42BPAQ5VT25 1732 aa31.11■■■□□ 2.57
PPFIA3-210ENST00000602800 GPATCH8Q9UKJ3 1502 aaKnown RBP31.1■■■□□ 2.57
PPFIA3-210ENST00000602800 SAMD9LQ8IVG5 1584 aa31.09■■■□□ 2.57
PPFIA3-210ENST00000602800 CFDP1Q9UEE9 299 aaPredicted RBP31.09■■■□□ 2.57
PPFIA3-210ENST00000602800 SYCP2Q9BX26 1530 aa31.07■■■□□ 2.56
PPFIA3-210ENST00000602800 KIAA1107Q9UPP5 1409 aa31.05■■■□□ 2.56
PPFIA3-210ENST00000602800 CCNB3Q8WWL7 1395 aa31.05■■■□□ 2.56
PPFIA3-210ENST00000602800 PLEKHH2Q8IVE3 1493 aa31.03■■■□□ 2.56
PPFIA3-210ENST00000602800 ZMYM3Q14202 1370 aa31.03■■■□□ 2.56
PPFIA3-210ENST00000602800 NPATQ14207 1427 aa31.02■■■□□ 2.56
PPFIA3-210ENST00000602800 NCOA1Q15788 1441 aa31■■■□□ 2.55
PPFIA3-210ENST00000602800 MTUS2Q5JR59 1369 aa31■■■□□ 2.55
PPFIA3-210ENST00000602800 ATP7AQ04656 1500 aa30.98■■■□□ 2.55
PPFIA3-210ENST00000602800 A2MP01023 1474 aa30.95■■■□□ 2.55
PPFIA3-210ENST00000602800 GGT6Q6P531 493 aa30.94■■■□□ 2.54
PPFIA3-210ENST00000602800 MROH2AA6NES4 1674 aa30.93■■■□□ 2.54
PPFIA3-210ENST00000602800 SUPT6HQ7KZ85 1726 aaKnown RBP30.91■■■□□ 2.54
PPFIA3-210ENST00000602800 DISP3Q9P2K9 1392 aa30.91■■■□□ 2.54
PPFIA3-210ENST00000602800 CAMSAP1Q5T5Y3 1602 aa30.9■■■□□ 2.54
PPFIA3-210ENST00000602800 INO80Q9ULG1 1556 aaPredicted RBP30.89■■■□□ 2.54
PPFIA3-210ENST00000602800 PLXNC1O60486 1568 aa30.88■■■□□ 2.53
PPFIA3-210ENST00000602800 LTBP4Q8N2S1 1624 aa30.88■■■□□ 2.53
PPFIA3-210ENST00000602800 PPP6R1Q9UPN7 881 aa30.88■■■□□ 2.53
PPFIA3-210ENST00000602800 ZNF644Q9H582 1327 aaPredicted RBP30.86■■■□□ 2.53
PPFIA3-210ENST00000602800 NCKAP5LQ9HCH0 1330 aa30.86■■■□□ 2.53
PPFIA3-210ENST00000602800 IQSEC2Q5JU85 1478 aa30.84■■■□□ 2.53
PPFIA3-210ENST00000602800 PTPRKQ15262 1439 aa30.83■■■□□ 2.53
PPFIA3-210ENST00000602800 PKD2Q13563 968 aa30.83■■■□□ 2.53
PPFIA3-210ENST00000602800 CLTCQ00610 1675 aaKnown RBP30.81■■■□□ 2.52
PPFIA3-210ENST00000602800 EHBP1L1Q8N3D4 1523 aa30.79■■■□□ 2.52
PPFIA3-210ENST00000602800 PLA2R1Q13018 1463 aa30.78■■■□□ 2.52
PPFIA3-210ENST00000602800 MBD5Q9P267 1494 aa30.78■■■□□ 2.52
PPFIA3-210ENST00000602800 TIAM1Q13009 1591 aa30.78■■■□□ 2.52
PPFIA3-210ENST00000602800 ZNF335Q9H4Z2 1342 aaPredicted RBP30.77■■■□□ 2.52
PPFIA3-210ENST00000602800 RTEL1-TNFRSF6BF6WH68 1400 aa30.77■■■□□ 2.52
PPFIA3-210ENST00000602800 CEP162Q5TB80 1403 aa30.77■■■□□ 2.52
PPFIA3-210ENST00000602800 ILDR2Q71H61 639 aa30.75■■■□□ 2.51
PPFIA3-210ENST00000602800 MYO3AQ8NEV4 1616 aa30.75■■■□□ 2.51
PPFIA3-210ENST00000602800 CEP170BQ9Y4F5 1589 aaPredicted RBP30.75■■■□□ 2.51
PPFIA3-210ENST00000602800 ADGBQ8N7X0 1667 aa30.74■■■□□ 2.51
PPFIA3-210ENST00000602800 DHX29Q7Z478 1369 aaKnown RBP30.74■■■□□ 2.51
PPFIA3-210ENST00000602800 ZNF142P52746 1687 aaPredicted RBP30.72■■■□□ 2.51
PPFIA3-210ENST00000602800 TCOF1Q13428 1488 aaKnown RBP30.71■■■□□ 2.51
PPFIA3-210ENST00000602800 KIF3BO15066 747 aa30.69■■■□□ 2.5
PPFIA3-210ENST00000602800 UBAP1LF5GYI3 381 aa30.68■■■□□ 2.5
PPFIA3-210ENST00000602800 RSPH4AQ5TD94 716 aa30.68■■■□□ 2.5
PPFIA3-210ENST00000602800 A2ML1A8K2U0 1454 aa30.66■■■□□ 2.5
PPFIA3-210ENST00000602800 CCDC141Q6ZP82 1450 aa30.65■■■□□ 2.5
PPFIA3-210ENST00000602800 SOCS7O14512 581 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms