RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 SAMD9Q5K651 1589 aa10.73□□□□□ -0.69
HCG18-244ENST00000602516 CDK11BP21127 795 aaKnown RBP10.73□□□□□ -0.69
HCG18-244ENST00000602516 CDK11AQ9UQ88 783 aaPredicted RBP10.73□□□□□ -0.69
HCG18-244ENST00000602516 GLIPR1L2Q4G1C9 344 aa10.73□□□□□ -0.69
HCG18-244ENST00000602516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.73□□□□□ -0.69
HCG18-244ENST00000602516 CASKIN1Q8WXD9 1431 aa10.73□□□□□ -0.69
HCG18-244ENST00000602516 FHOD3Q2V2M9 1422 aa10.72□□□□□ -0.69
HCG18-244ENST00000602516 PBRM1Q86U86 1689 aa10.72□□□□□ -0.69
HCG18-244ENST00000602516 TMEM132AQ24JP5 1023 aa10.72□□□□□ -0.69
HCG18-244ENST00000602516 ZNF326Q5BKZ1 582 aaKnown RBP10.71□□□□□ -0.69
HCG18-244ENST00000602516 NAP1L5Q96NT1 182 aaPredicted RBP10.71□□□□□ -0.69
HCG18-244ENST00000602516 SPINK5Q9NQ38 1064 aaPredicted RBP10.71□□□□□ -0.69
HCG18-244ENST00000602516 IFT140Q96RY7 1462 aa10.7□□□□□ -0.7
HCG18-244ENST00000602516 DHX57Q6P158 1386 aaKnown RBP10.7□□□□□ -0.7
HCG18-244ENST00000602516 FMN1Q68DA7 1419 aa10.69□□□□□ -0.7
HCG18-244ENST00000602516 SNAPC4Q5SXM2 1469 aa10.69□□□□□ -0.7
HCG18-244ENST00000602516 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
HCG18-244ENST00000602516 PHLDB1Q86UU1 1377 aa10.68□□□□□ -0.7
HCG18-244ENST00000602516 IRX6P78412 446 aaPredicted RBP10.68□□□□□ -0.7
HCG18-244ENST00000602516 VSIG10Q8N0Z9 540 aa10.67□□□□□ -0.7
HCG18-244ENST00000602516 HSP90B1P14625 803 aaKnown RBP10.67□□□□□ -0.7
HCG18-244ENST00000602516 BCCIPQ9P287 314 aaKnown RBP eCLIP10.67□□□□□ -0.7
HCG18-244ENST00000602516 LRRIQ1Q96JM4 1722 aa10.66□□□□□ -0.7
HCG18-244ENST00000602516 ADAMTS12P58397 1594 aa10.66□□□□□ -0.7
HCG18-244ENST00000602516 ZNF316A6NFI3 1004 aaPredicted RBP10.66□□□□□ -0.7
HCG18-244ENST00000602516 TRHP20396 242 aaPredicted RBP10.66□□□□□ -0.7
HCG18-244ENST00000602516 DIEXFQ68CQ4 756 aaKnown RBP10.65□□□□□ -0.7
HCG18-244ENST00000602516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.64□□□□□ -0.71
HCG18-244ENST00000602516 GRIN2BQ13224 1484 aa10.64□□□□□ -0.71
HCG18-244ENST00000602516 ZNF608Q9ULD9 1512 aaPredicted RBP10.64□□□□□ -0.71
HCG18-244ENST00000602516 IQGAP2Q13576 1575 aa10.62□□□□□ -0.71
HCG18-244ENST00000602516 IGSF3O75054 1194 aa10.61□□□□□ -0.71
HCG18-244ENST00000602516 NAP1L2Q9ULW6 460 aaPredicted RBP10.61□□□□□ -0.71
HCG18-244ENST00000602516 ZNF219Q9P2Y4 722 aaPredicted RBP10.6□□□□□ -0.71
HCG18-244ENST00000602516 EIF4G3O43432 1585 aaKnown RBP10.6□□□□□ -0.71
HCG18-244ENST00000602516 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
HCG18-244ENST00000602516 SETD5Q9C0A6 1442 aa10.59□□□□□ -0.71
HCG18-244ENST00000602516 ATP1B4Q9UN42 357 aaPredicted RBP10.59□□□□□ -0.71
HCG18-244ENST00000602516 UGGT2Q9NYU1 1516 aa10.58□□□□□ -0.72
HCG18-244ENST00000602516 ITGAEP38570 1179 aa10.57□□□□□ -0.72
HCG18-244ENST00000602516 MAPKBP1O60336 1514 aa10.57□□□□□ -0.72
HCG18-244ENST00000602516 FGD6Q6ZV73 1430 aa10.57□□□□□ -0.72
HCG18-244ENST00000602516 SUPT6HQ7KZ85 1726 aaKnown RBP10.57□□□□□ -0.72
HCG18-244ENST00000602516 EHBP1L1Q8N3D4 1523 aa10.57□□□□□ -0.72
HCG18-244ENST00000602516 CCDC18Q5T9S5 1454 aa10.57□□□□□ -0.72
HCG18-244ENST00000602516 ARHGEF11O15085 1522 aa10.56□□□□□ -0.72
HCG18-244ENST00000602516 HECW1Q76N89 1606 aa10.56□□□□□ -0.72
HCG18-244ENST00000602516 MTUS2Q5JR59 1369 aa10.56□□□□□ -0.72
HCG18-244ENST00000602516 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
HCG18-244ENST00000602516 FAM50AQ14320 339 aaKnown RBP10.55□□□□□ -0.72
HCG18-244ENST00000602516 NCOA2Q15596 1464 aa10.55□□□□□ -0.72
HCG18-244ENST00000602516 MAGI3Q5TCQ9 1506 aa10.54□□□□□ -0.72
HCG18-244ENST00000602516 KIAA0586Q9BVV6 1533 aa10.54□□□□□ -0.72
HCG18-244ENST00000602516 ABCB7O75027 752 aa10.54□□□□□ -0.72
HCG18-244ENST00000602516 PLCB2Q00722 1185 aa10.54□□□□□ -0.72
HCG18-244ENST00000602516 CAPN15O75808 1086 aa10.53□□□□□ -0.72
HCG18-244ENST00000602516 MKRN4PQ13434 485 aaPredicted RBP10.53□□□□□ -0.72
HCG18-244ENST00000602516 ZFP91Q96JP5 570 aaPredicted RBP10.53□□□□□ -0.72
HCG18-244ENST00000602516 DNAJC5Q9H3Z4 198 aa10.53□□□□□ -0.72
HCG18-244ENST00000602516 MYOM3Q5VTT5 1437 aa10.53□□□□□ -0.72
HCG18-244ENST00000602516 GRIN2AQ12879 1464 aa10.52□□□□□ -0.72
HCG18-244ENST00000602516 EPRSP07814 1512 aaKnown RBP10.52□□□□□ -0.73
HCG18-244ENST00000602516 KIAA0556O60303 1618 aa10.51□□□□□ -0.73
HCG18-244ENST00000602516 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
HCG18-244ENST00000602516 DISP1Q96F81 1524 aa10.51□□□□□ -0.73
HCG18-244ENST00000602516 POLA2Q14181 598 aa10.5□□□□□ -0.73
HCG18-244ENST00000602516 PTPN23Q9H3S7 1636 aa10.5□□□□□ -0.73
HCG18-244ENST00000602516 CHRM1P11229 460 aaPredicted RBP10.5□□□□□ -0.73
HCG18-244ENST00000602516 CHMP4BQ9H444 224 aaKnown RBP10.5□□□□□ -0.73
HCG18-244ENST00000602516 PTPRKQ15262 1439 aa10.49□□□□□ -0.73
HCG18-244ENST00000602516 TCOF1Q13428 1488 aaKnown RBP10.49□□□□□ -0.73
HCG18-244ENST00000602516 HFM1A2PYH4 1435 aa10.49□□□□□ -0.73
HCG18-244ENST00000602516 IPO4Q8TEX9 1081 aaKnown RBP10.48□□□□□ -0.73
HCG18-244ENST00000602516 POTEDQ86YR6 584 aa10.48□□□□□ -0.73
HCG18-244ENST00000602516 SYNJ2O15056 1496 aa10.47□□□□□ -0.73
HCG18-244ENST00000602516 OSCARQ8IYS5 282 aa10.47□□□□□ -0.73
HCG18-244ENST00000602516 CFAP44Q96MT7 982 aa10.47□□□□□ -0.73
HCG18-244ENST00000602516 CEP170Q5SW79 1584 aa10.47□□□□□ -0.73
HCG18-244ENST00000602516 CDK13Q14004 1512 aaKnown RBP10.46□□□□□ -0.73
HCG18-244ENST00000602516 RAPGEF6Q8TEU7 1601 aa10.45□□□□□ -0.74
HCG18-244ENST00000602516 CHD1O14646 1710 aa10.45□□□□□ -0.74
HCG18-244ENST00000602516 TEX2Q8IWB9 1127 aa10.45□□□□□ -0.74
HCG18-244ENST00000602516 SECISBP2LQ93073 1101 aaKnown RBP10.45□□□□□ -0.74
HCG18-244ENST00000602516 POLR3GLQ9BT43 218 aa10.45□□□□□ -0.74
HCG18-244ENST00000602516 NAIPQ13075 1403 aa10.45□□□□□ -0.74
HCG18-244ENST00000602516 MIA2Q96PC5 1412 aa10.45□□□□□ -0.74
HCG18-244ENST00000602516 MIER1Q8N108 512 aa10.44□□□□□ -0.74
HCG18-244ENST00000602516 RNF39Q9H2S5 420 aa10.44□□□□□ -0.74
HCG18-244ENST00000602516 SUPT16HQ9Y5B9 1047 aaKnown RBP10.44□□□□□ -0.74
HCG18-244ENST00000602516 NUP153P49790 1475 aaKnown RBP10.43□□□□□ -0.74
HCG18-244ENST00000602516 NUP160Q12769 1436 aa10.43□□□□□ -0.74
HCG18-244ENST00000602516 UACAQ9BZF9 1416 aa10.43□□□□□ -0.74
HCG18-244ENST00000602516 GCC2Q8IWJ2 1684 aa10.43□□□□□ -0.74
HCG18-244ENST00000602516 BRPF3Q9ULD4 1205 aa10.43□□□□□ -0.74
HCG18-244ENST00000602516 FBLN2P98095 1184 aa10.43□□□□□ -0.74
HCG18-244ENST00000602516 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
HCG18-244ENST00000602516 AKNAQ7Z591 1439 aa10.42□□□□□ -0.74
HCG18-244ENST00000602516 CHMP7Q8WUX9 453 aaPredicted RBP10.42□□□□□ -0.74
HCG18-244ENST00000602516 CCDC9Q9Y3X0 531 aaKnown RBP10.41□□□□□ -0.74
HCG18-244ENST00000602516 GTF2E1P29083 439 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms