RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 KIF14Q15058 1648 aa15.63■□□□□ 0.09
SCN1B-205ENST00000602150 TROQ12816 1431 aaPredicted RBP15.62■□□□□ 0.09
SCN1B-205ENST00000602150 PTPN23Q9H3S7 1636 aa15.61■□□□□ 0.09
SCN1B-205ENST00000602150 CYB5RLQ6IPT4 315 aa15.6■□□□□ 0.09
SCN1B-205ENST00000602150 UACAQ9BZF9 1416 aa15.59■□□□□ 0.09
SCN1B-205ENST00000602150 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.08
SCN1B-205ENST00000602150 NAIPQ13075 1403 aa15.53■□□□□ 0.08
SCN1B-205ENST00000602150 GPATCH8Q9UKJ3 1502 aaKnown RBP15.53■□□□□ 0.08
SCN1B-205ENST00000602150 ZNF326Q5BKZ1 582 aaKnown RBP15.52■□□□□ 0.08
SCN1B-205ENST00000602150 ABCA8O94911 1581 aa15.52■□□□□ 0.08
SCN1B-205ENST00000602150 TSPY4P0CV99 314 aa15.52■□□□□ 0.08
SCN1B-205ENST00000602150 TSPY10P0CW01 314 aa15.52■□□□□ 0.08
SCN1B-205ENST00000602150 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.07
SCN1B-205ENST00000602150 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
SCN1B-205ENST00000602150 ABCC5O15440 1437 aa15.5■□□□□ 0.07
SCN1B-205ENST00000602150 CAMSAP2Q08AD1 1489 aa15.5■□□□□ 0.07
SCN1B-205ENST00000602150 DAPK1P53355 1430 aa15.5■□□□□ 0.07
SCN1B-205ENST00000602150 KDM6BO15054 1643 aa15.49■□□□□ 0.07
SCN1B-205ENST00000602150 MAPKBP1O60336 1514 aa15.48■□□□□ 0.07
SCN1B-205ENST00000602150 HFM1A2PYH4 1435 aa15.47■□□□□ 0.07
SCN1B-205ENST00000602150 MPHOSPH9Q99550 1183 aa15.47■□□□□ 0.07
SCN1B-205ENST00000602150 AFAP1Q8N556 730 aa15.46■□□□□ 0.07
SCN1B-205ENST00000602150 CLASP1Q7Z460 1538 aa15.46■□□□□ 0.07
SCN1B-205ENST00000602150 MIA2Q96PC5 1412 aa15.45■□□□□ 0.06
SCN1B-205ENST00000602150 CNGB1Q14028 1251 aaPredicted RBP15.44■□□□□ 0.06
SCN1B-205ENST00000602150 TONSLQ96HA7 1378 aa15.44■□□□□ 0.06
SCN1B-205ENST00000602150 ARHGAP5Q13017 1502 aa15.44■□□□□ 0.06
SCN1B-205ENST00000602150 ABCC2Q92887 1545 aa15.42■□□□□ 0.06
SCN1B-205ENST00000602150 SENP3Q9H4L4 574 aaPredicted RBP15.41■□□□□ 0.06
SCN1B-205ENST00000602150 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.41■□□□□ 0.06
SCN1B-205ENST00000602150 PKD2Q13563 968 aa15.4■□□□□ 0.06
SCN1B-205ENST00000602150 SHROOM2Q13796 1616 aa15.4■□□□□ 0.06
SCN1B-205ENST00000602150 RBM19Q9Y4C8 960 aaKnown RBP15.4■□□□□ 0.06
SCN1B-205ENST00000602150 TCOF1Q13428 1488 aaKnown RBP15.39■□□□□ 0.06
SCN1B-205ENST00000602150 TTC37Q6PGP7 1564 aa15.39■□□□□ 0.05
SCN1B-205ENST00000602150 ABCC10Q5T3U5 1492 aa15.39■□□□□ 0.05
SCN1B-205ENST00000602150 KDM2AQ9Y2K7 1162 aa15.38■□□□□ 0.05
SCN1B-205ENST00000602150 NUP155O75694 1391 aa15.37■□□□□ 0.05
SCN1B-205ENST00000602150 C9orf84Q5VXU9 1444 aa15.37■□□□□ 0.05
SCN1B-205ENST00000602150 EFCAB2Q5VUJ9 269 aa15.37■□□□□ 0.05
SCN1B-205ENST00000602150 POLR3GLQ9BT43 218 aa15.37■□□□□ 0.05
SCN1B-205ENST00000602150 ANKRD30AQ9BXX3 1397 aa15.36■□□□□ 0.05
SCN1B-205ENST00000602150 KIF15Q9NS87 1388 aa15.36■□□□□ 0.05
SCN1B-205ENST00000602150 RGL3Q3MIN7 710 aa15.36■□□□□ 0.05
SCN1B-205ENST00000602150 SYCP2Q9BX26 1530 aa15.35■□□□□ 0.05
SCN1B-205ENST00000602150 CDC42BPAQ5VT25 1732 aa15.35■□□□□ 0.05
SCN1B-205ENST00000602150 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCN1B-205ENST00000602150 ZCCHC11Q5TAX3 1644 aaKnown RBP15.35■□□□□ 0.05
SCN1B-205ENST00000602150 FKBP8Q14318 412 aa15.35■□□□□ 0.05
SCN1B-205ENST00000602150 NCOA1Q15788 1441 aa15.35■□□□□ 0.05
SCN1B-205ENST00000602150 AKNAQ7Z591 1439 aa15.33■□□□□ 0.05
SCN1B-205ENST00000602150 ASXL2Q76L83 1435 aa15.33■□□□□ 0.04
SCN1B-205ENST00000602150 ANKRD50Q9ULJ7 1429 aa15.33■□□□□ 0.04
SCN1B-205ENST00000602150 DDX10Q13206 875 aaKnown RBP15.33■□□□□ 0.04
SCN1B-205ENST00000602150 L3MBTL2Q969R5 705 aa15.33■□□□□ 0.04
SCN1B-205ENST00000602150 ADCY10Q96PN6 1610 aa15.33■□□□□ 0.04
SCN1B-205ENST00000602150 BCANQ96GW7 911 aa15.33■□□□□ 0.04
SCN1B-205ENST00000602150 DNMT1P26358 1616 aaKnown RBP15.32■□□□□ 0.04
SCN1B-205ENST00000602150 PPP1R15AO75807 674 aaPredicted RBP15.3■□□□□ 0.04
SCN1B-205ENST00000602150 RAPGEF3O95398 923 aa15.3■□□□□ 0.04
SCN1B-205ENST00000602150 TRAPPC8Q9Y2L5 1435 aa15.3■□□□□ 0.04
SCN1B-205ENST00000602150 ITSN2Q9NZM3 1697 aa15.3■□□□□ 0.04
SCN1B-205ENST00000602150 SPAG9O60271 1321 aaKnown RBP15.29■□□□□ 0.04
SCN1B-205ENST00000602150 SAMD9LQ8IVG5 1584 aa15.29■□□□□ 0.04
SCN1B-205ENST00000602150 MSH5O43196 834 aa15.29■□□□□ 0.04
SCN1B-205ENST00000602150 ARHGEF12Q9NZN5 1544 aa15.27■□□□□ 0.04
SCN1B-205ENST00000602150 KDM5BQ9UGL1 1544 aa15.27■□□□□ 0.04
SCN1B-205ENST00000602150 DENND4BO75064 1496 aaPredicted RBP15.27■□□□□ 0.03
SCN1B-205ENST00000602150 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.03
SCN1B-205ENST00000602150 WDR7Q9Y4E6 1490 aa15.26■□□□□ 0.03
SCN1B-205ENST00000602150 KIF3BO15066 747 aa15.26■□□□□ 0.03
SCN1B-205ENST00000602150 FAM69CQ0P6D2 419 aa15.26■□□□□ 0.03
SCN1B-205ENST00000602150 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
SCN1B-205ENST00000602150 CCDC141Q6ZP82 1450 aa15.25■□□□□ 0.03
SCN1B-205ENST00000602150 MBD5Q9P267 1494 aa15.25■□□□□ 0.03
SCN1B-205ENST00000602150 ROCK1Q13464 1354 aa15.24■□□□□ 0.03
SCN1B-205ENST00000602150 GGT6Q6P531 493 aa15.24■□□□□ 0.03
SCN1B-205ENST00000602150 PLEKHH2Q8IVE3 1493 aa15.24■□□□□ 0.03
SCN1B-205ENST00000602150 PLCH2O75038 1416 aa15.23■□□□□ 0.03
SCN1B-205ENST00000602150 NBPF8Q3BBV2 869 aa15.22■□□□□ 0.03
SCN1B-205ENST00000602150 PLPPR3Q6T4P5 718 aa15.22■□□□□ 0.03
SCN1B-205ENST00000602150 FANCAO15360 1455 aa15.22■□□□□ 0.03
SCN1B-205ENST00000602150 PREX2Q70Z35 1606 aa15.2■□□□□ 0.02
SCN1B-205ENST00000602150 GCC2Q8IWJ2 1684 aa15.2■□□□□ 0.02
SCN1B-205ENST00000602150 CHGAP10645 457 aaKnown RBP15.2■□□□□ 0.02
SCN1B-205ENST00000602150 DCAF11Q8TEB1 546 aa15.2■□□□□ 0.02
SCN1B-205ENST00000602150 FANCIQ9NVI1 1328 aa15.2■□□□□ 0.02
SCN1B-205ENST00000602150 UHRF1BP1LA0JNW5 1464 aa15.19■□□□□ 0.02
SCN1B-205ENST00000602150 CD109Q6YHK3 1445 aa15.19■□□□□ 0.02
SCN1B-205ENST00000602150 PZPP20742 1482 aa15.19■□□□□ 0.02
SCN1B-205ENST00000602150 MLECQ14165 292 aa15.18■□□□□ 0.02
SCN1B-205ENST00000602150 MYO5CQ9NQX4 1742 aa15.18■□□□□ 0.02
SCN1B-205ENST00000602150 ANKRD30BQ9BXX2 1392 aa15.18■□□□□ 0.02
SCN1B-205ENST00000602150 ADGRL1O94910 1474 aa15.18■□□□□ 0.02
SCN1B-205ENST00000602150 HSPA5P11021 654 aaKnown RBP15.17■□□□□ 0.02
SCN1B-205ENST00000602150 NEFLP07196 543 aa15.16■□□□□ 0.02
SCN1B-205ENST00000602150 CCER2I3L3R5 266 aa15.16■□□□□ 0.02
SCN1B-205ENST00000602150 RSPH4AQ5TD94 716 aa15.13■□□□□ 0.01
SCN1B-205ENST00000602150 NUTM2DQ5VT03 806 aaPredicted RBP15.13■□□□□ 0.01
SCN1B-205ENST00000602150 KIAA1107Q9UPP5 1409 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms