RNA–Protein interactions for RNA: ENST00000601953.5

CAPN12-212, Transcript of calpain 12, humanhuman

TSL 5 BASIC

Gene CAPN12, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-212ENST00000601953 CDK11AQ9UQ88 783 aaPredicted RBP31.01■■■□□ 2.55
CAPN12-212ENST00000601953 CHIC2Q9UKJ5 165 aa31■■■□□ 2.55
CAPN12-212ENST00000601953 ROCK1Q13464 1354 aa30.95■■■□□ 2.55
CAPN12-212ENST00000601953 ERICH6Q7L0X2 663 aa30.95■■■□□ 2.54
CAPN12-212ENST00000601953 CCER2I3L3R5 266 aa30.94■■■□□ 2.54
CAPN12-212ENST00000601953 DAPK1P53355 1430 aa30.94■■■□□ 2.54
CAPN12-212ENST00000601953 KDM6BO15054 1643 aa30.93■■■□□ 2.54
CAPN12-212ENST00000601953 CARMIL2Q6F5E8 1435 aa30.93■■■□□ 2.54
CAPN12-212ENST00000601953 DNMT1P26358 1616 aaKnown RBP30.93■■■□□ 2.54
CAPN12-212ENST00000601953 DENND4BO75064 1496 aaPredicted RBP30.93■■■□□ 2.54
CAPN12-212ENST00000601953 TROQ12816 1431 aaPredicted RBP30.92■■■□□ 2.54
CAPN12-212ENST00000601953 KDM5BQ9UGL1 1544 aa30.9■■■□□ 2.54
CAPN12-212ENST00000601953 PLB1Q6P1J6 1458 aa30.9■■■□□ 2.54
CAPN12-212ENST00000601953 ABCC5O15440 1437 aa30.89■■■□□ 2.54
CAPN12-212ENST00000601953 JPH4Q96JJ6 628 aa30.88■■■□□ 2.53
CAPN12-212ENST00000601953 FBLN2P98095 1184 aa30.87■■■□□ 2.53
CAPN12-212ENST00000601953 PRG4Q92954 1404 aaPredicted RBP30.86■■■□□ 2.53
CAPN12-212ENST00000601953 DDX10Q13206 875 aaKnown RBP30.85■■■□□ 2.53
CAPN12-212ENST00000601953 ADCY10Q96PN6 1610 aa30.85■■■□□ 2.53
CAPN12-212ENST00000601953 TRIM52Q96A61 297 aa30.84■■■□□ 2.53
CAPN12-212ENST00000601953 ITSN2Q9NZM3 1697 aa30.81■■■□□ 2.52
CAPN12-212ENST00000601953 MPHOSPH9Q99550 1183 aa30.81■■■□□ 2.52
CAPN12-212ENST00000601953 ZNF644Q9H582 1327 aaPredicted RBP30.8■■■□□ 2.52
CAPN12-212ENST00000601953 GPATCH8Q9UKJ3 1502 aaKnown RBP30.77■■■□□ 2.52
CAPN12-212ENST00000601953 ABCA8O94911 1581 aa30.76■■■□□ 2.51
CAPN12-212ENST00000601953 CAMSAP2Q08AD1 1489 aa30.75■■■□□ 2.51
CAPN12-212ENST00000601953 KIF14Q15058 1648 aa30.74■■■□□ 2.51
CAPN12-212ENST00000601953 HIRIP3Q9BW71 556 aaPredicted RBP30.74■■■□□ 2.51
CAPN12-212ENST00000601953 DEKP35659 375 aaKnown RBP30.73■■■□□ 2.51
CAPN12-212ENST00000601953 CFDP1Q9UEE9 299 aaPredicted RBP30.72■■■□□ 2.51
CAPN12-212ENST00000601953 ANP32CO43423 234 aa30.69■■■□□ 2.5
CAPN12-212ENST00000601953 ANKRD30BQ9BXX2 1392 aa30.66■■■□□ 2.5
CAPN12-212ENST00000601953 ADGBQ8N7X0 1667 aa30.65■■■□□ 2.5
CAPN12-212ENST00000601953 ADGRL2O95490 1459 aa30.65■■■□□ 2.5
CAPN12-212ENST00000601953 NCOA1Q15788 1441 aa30.65■■■□□ 2.5
CAPN12-212ENST00000601953 ERICH6BQ5W0A0 696 aa30.64■■■□□ 2.5
CAPN12-212ENST00000601953 ATP10BO94823 1461 aa30.64■■■□□ 2.49
CAPN12-212ENST00000601953 CROCC2H7BZ55 1655 aa30.63■■■□□ 2.49
CAPN12-212ENST00000601953 RPRD2Q5VT52 1461 aaKnown RBP30.61■■■□□ 2.49
CAPN12-212ENST00000601953 PLEKHD1A6NEE1 506 aa30.61■■■□□ 2.49
CAPN12-212ENST00000601953 ABCC10Q5T3U5 1492 aa30.6■■■□□ 2.49
CAPN12-212ENST00000601953 FOXD1Q16676 465 aa30.57■■■□□ 2.48
CAPN12-212ENST00000601953 L3MBTL2Q969R5 705 aa30.57■■■□□ 2.48
CAPN12-212ENST00000601953 CDC42BPAQ5VT25 1732 aa30.56■■■□□ 2.48
CAPN12-212ENST00000601953 SLC4A1APQ9BWU0 796 aaKnown RBP30.55■■■□□ 2.48
CAPN12-212ENST00000601953 PZPP20742 1482 aa30.54■■■□□ 2.48
CAPN12-212ENST00000601953 ZNF777Q9ULD5 760 aaPredicted RBP30.53■■■□□ 2.48
CAPN12-212ENST00000601953 TEX14Q8IWB6 1497 aa30.52■■■□□ 2.48
CAPN12-212ENST00000601953 ANKRD30AQ9BXX3 1397 aa30.52■■■□□ 2.48
CAPN12-212ENST00000601953 PTPRGP23470 1445 aa30.51■■■□□ 2.47
CAPN12-212ENST00000601953 SHANK2Q9UPX8 1470 aa30.51■■■□□ 2.47
CAPN12-212ENST00000601953 HSPA5P11021 654 aaKnown RBP30.5■■■□□ 2.47
CAPN12-212ENST00000601953 EIF4G2P78344 907 aaKnown RBP eCLIP30.48■■■□□ 2.47
CAPN12-212ENST00000601953 PPP4R2Q9NY27 417 aa30.45■■■□□ 2.47
CAPN12-212ENST00000601953 CHD1O14646 1710 aa30.44■■■□□ 2.46
CAPN12-212ENST00000601953 ANKRD50Q9ULJ7 1429 aa30.42■■■□□ 2.46
CAPN12-212ENST00000601953 WASHC2AQ641Q2 1341 aa30.42■■■□□ 2.46
CAPN12-212ENST00000601953 KIAA1107Q9UPP5 1409 aa30.41■■■□□ 2.46
CAPN12-212ENST00000601953 SHROOM2Q13796 1616 aa30.41■■■□□ 2.46
CAPN12-212ENST00000601953 C9orf84Q5VXU9 1444 aa30.41■■■□□ 2.46
CAPN12-212ENST00000601953 ARHGEF5Q12774 1597 aa30.38■■■□□ 2.45
CAPN12-212ENST00000601953 NOP58Q9Y2X3 529 aaKnown RBP30.37■■■□□ 2.45
CAPN12-212ENST00000601953 NBPF8Q3BBV2 869 aa30.37■■■□□ 2.45
CAPN12-212ENST00000601953 IRX6P78412 446 aaPredicted RBP30.35■■■□□ 2.45
CAPN12-212ENST00000601953 HNRNPUQ00839 825 aaKnown RBP eCLIP30.34■■■□□ 2.45
CAPN12-212ENST00000601953 ANO8Q9HCE9 1232 aaPredicted RBP30.34■■■□□ 2.45
CAPN12-212ENST00000601953 MBD5Q9P267 1494 aa30.32■■■□□ 2.44
CAPN12-212ENST00000601953 TSPY4P0CV99 314 aa30.31■■■□□ 2.44
CAPN12-212ENST00000601953 TSPY10P0CW01 314 aa30.31■■■□□ 2.44
CAPN12-212ENST00000601953 KDM5DQ9BY66 1539 aa30.31■■■□□ 2.44
CAPN12-212ENST00000601953 PREX2Q70Z35 1606 aa30.31■■■□□ 2.44
CAPN12-212ENST00000601953 PKD2Q13563 968 aa30.3■■■□□ 2.44
CAPN12-212ENST00000601953 SPATA31E1Q6ZUB1 1445 aa30.29■■■□□ 2.44
CAPN12-212ENST00000601953 CDC42BPBQ9Y5S2 1711 aa30.27■■■□□ 2.44
CAPN12-212ENST00000601953 CNTLNQ9NXG0 1405 aa30.27■■■□□ 2.44
CAPN12-212ENST00000601953 SAMD9LQ8IVG5 1584 aa30.26■■■□□ 2.44
CAPN12-212ENST00000601953 CCDC7Q96M83 1385 aa30.26■■■□□ 2.43
CAPN12-212ENST00000601953 CCDC141Q6ZP82 1450 aa30.25■■■□□ 2.43
CAPN12-212ENST00000601953 NUP155O75694 1391 aa30.24■■■□□ 2.43
CAPN12-212ENST00000601953 KIF15Q9NS87 1388 aa30.24■■■□□ 2.43
CAPN12-212ENST00000601953 HNRNPMP52272 730 aaKnown RBP eCLIP30.23■■■□□ 2.43
CAPN12-212ENST00000601953 RSPH4AQ5TD94 716 aa30.23■■■□□ 2.43
CAPN12-212ENST00000601953 C11orf95C9JLR9 678 aaPredicted RBP30.21■■■□□ 2.43
CAPN12-212ENST00000601953 ABCC2Q92887 1545 aa30.21■■■□□ 2.43
CAPN12-212ENST00000601953 NBR1Q14596 966 aa30.2■■■□□ 2.42
CAPN12-212ENST00000601953 POLR1AO95602 1720 aaPredicted RBP30.19■■■□□ 2.42
CAPN12-212ENST00000601953 ERCC6L2Q5T890 1561 aa30.16■■■□□ 2.42
CAPN12-212ENST00000601953 PAK3O75914 559 aaPredicted RBP30.16■■■□□ 2.42
CAPN12-212ENST00000601953 TTC37Q6PGP7 1564 aa30.16■■■□□ 2.42
CAPN12-212ENST00000601953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.15■■■□□ 2.42
CAPN12-212ENST00000601953 MAST1Q9Y2H9 1570 aa30.13■■■□□ 2.41
CAPN12-212ENST00000601953 UHRF1BP1Q6BDS2 1440 aa30.13■■■□□ 2.41
CAPN12-212ENST00000601953 ARHGEF12Q9NZN5 1544 aa30.12■■■□□ 2.41
CAPN12-212ENST00000601953 SALL2Q9Y467 1007 aaPredicted RBP30.11■■■□□ 2.41
CAPN12-212ENST00000601953 KIF7Q2M1P5 1343 aa30.11■■■□□ 2.41
CAPN12-212ENST00000601953 ARHGAP5Q13017 1502 aa30.1■■■□□ 2.41
CAPN12-212ENST00000601953 SYCP2Q9BX26 1530 aa30.09■■■□□ 2.41
CAPN12-212ENST00000601953 CLASP1Q7Z460 1538 aa30.09■■■□□ 2.41
CAPN12-212ENST00000601953 RTL5Q5HYW3 569 aaPredicted RBP30.08■■■□□ 2.41
CAPN12-212ENST00000601953 B4GALNT3Q6L9W6 998 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms