RNA–Protein interactions for RNA: ENST00000601613.1

SAMD4B-211, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 2,690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-211ENST00000601613 FAM69CQ0P6D2 419 aa11.67□□□□□ -0.54
SAMD4B-211ENST00000601613 TIAM1Q13009 1591 aa11.67□□□□□ -0.54
SAMD4B-211ENST00000601613 ABCC10Q5T3U5 1492 aa11.66□□□□□ -0.54
SAMD4B-211ENST00000601613 CASKIN1Q8WXD9 1431 aa11.66□□□□□ -0.54
SAMD4B-211ENST00000601613 IRX6P78412 446 aaPredicted RBP11.65□□□□□ -0.54
SAMD4B-211ENST00000601613 WDR7Q9Y4E6 1490 aa11.64□□□□□ -0.55
SAMD4B-211ENST00000601613 HECW1Q76N89 1606 aa11.64□□□□□ -0.55
SAMD4B-211ENST00000601613 PLEKHD1A6NEE1 506 aa11.64□□□□□ -0.55
SAMD4B-211ENST00000601613 PCF11O94913 1555 aaKnown RBP11.63□□□□□ -0.55
SAMD4B-211ENST00000601613 EPRSP07814 1512 aaKnown RBP11.63□□□□□ -0.55
SAMD4B-211ENST00000601613 CDK13Q14004 1512 aaKnown RBP11.63□□□□□ -0.55
SAMD4B-211ENST00000601613 DIP2BQ9P265 1576 aa11.63□□□□□ -0.55
SAMD4B-211ENST00000601613 CHIC2Q9UKJ5 165 aa11.63□□□□□ -0.55
SAMD4B-211ENST00000601613 FYCO1Q9BQS8 1478 aa11.62□□□□□ -0.55
SAMD4B-211ENST00000601613 KIF13AQ9H1H9 1805 aa11.61□□□□□ -0.55
SAMD4B-211ENST00000601613 ANP32CO43423 234 aa11.61□□□□□ -0.55
SAMD4B-211ENST00000601613 CCDC136Q96JN2 1154 aa11.61□□□□□ -0.55
SAMD4B-211ENST00000601613 CDK11AQ9UQ88 783 aaPredicted RBP11.61□□□□□ -0.55
SAMD4B-211ENST00000601613 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
SAMD4B-211ENST00000601613 CNGB1Q14028 1251 aaPredicted RBP11.59□□□□□ -0.55
SAMD4B-211ENST00000601613 RRP7BPQ9NSQ0 103 aa11.59□□□□□ -0.55
SAMD4B-211ENST00000601613 PTPRKQ15262 1439 aa11.59□□□□□ -0.55
SAMD4B-211ENST00000601613 GLI2P10070 1586 aa11.58□□□□□ -0.56
SAMD4B-211ENST00000601613 CCDC18Q5T9S5 1454 aa11.58□□□□□ -0.56
SAMD4B-211ENST00000601613 DEKP35659 375 aaKnown RBP11.58□□□□□ -0.56
SAMD4B-211ENST00000601613 FOXD1Q16676 465 aa11.58□□□□□ -0.56
SAMD4B-211ENST00000601613 LRRIQ1Q96JM4 1722 aa11.58□□□□□ -0.56
SAMD4B-211ENST00000601613 TONSLQ96HA7 1378 aa11.57□□□□□ -0.56
SAMD4B-211ENST00000601613 SENP3-EIF4A1A0A087X0R7 540 aa11.56□□□□□ -0.56
SAMD4B-211ENST00000601613 NEFLP07196 543 aa11.55□□□□□ -0.56
SAMD4B-211ENST00000601613 CD109Q6YHK3 1445 aa11.54□□□□□ -0.56
SAMD4B-211ENST00000601613 MTUS2Q5JR59 1369 aa11.54□□□□□ -0.56
SAMD4B-211ENST00000601613 HNRNPUQ00839 825 aaKnown RBP eCLIP11.54□□□□□ -0.56
SAMD4B-211ENST00000601613 CCDC184Q52MB2 194 aa11.54□□□□□ -0.56
SAMD4B-211ENST00000601613 TSPOAP1O95153 1857 aa11.54□□□□□ -0.56
SAMD4B-211ENST00000601613 TROQ12816 1431 aaPredicted RBP11.54□□□□□ -0.56
SAMD4B-211ENST00000601613 MAP3K4Q9Y6R4 1608 aa11.53□□□□□ -0.56
SAMD4B-211ENST00000601613 MAGI3Q5TCQ9 1506 aa11.52□□□□□ -0.57
SAMD4B-211ENST00000601613 FGD6Q6ZV73 1430 aa11.51□□□□□ -0.57
SAMD4B-211ENST00000601613 ABCA9Q8IUA7 1624 aa11.51□□□□□ -0.57
SAMD4B-211ENST00000601613 CFAP43Q8NDM7 1665 aa11.51□□□□□ -0.57
SAMD4B-211ENST00000601613 MAP3K1Q13233 1512 aa11.5□□□□□ -0.57
SAMD4B-211ENST00000601613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.5□□□□□ -0.57
SAMD4B-211ENST00000601613 PPRC1Q5VV67 1664 aaKnown RBP11.49□□□□□ -0.57
SAMD4B-211ENST00000601613 KIF14Q15058 1648 aa11.49□□□□□ -0.57
SAMD4B-211ENST00000601613 CCER2I3L3R5 266 aa11.49□□□□□ -0.57
SAMD4B-211ENST00000601613 HSPA5P11021 654 aaKnown RBP11.49□□□□□ -0.57
SAMD4B-211ENST00000601613 TEX14Q8IWB6 1497 aa11.49□□□□□ -0.57
SAMD4B-211ENST00000601613 C11orf95C9JLR9 678 aaPredicted RBP11.48□□□□□ -0.57
SAMD4B-211ENST00000601613 WASHC2AQ641Q2 1341 aa11.48□□□□□ -0.57
SAMD4B-211ENST00000601613 TTC37Q6PGP7 1564 aa11.48□□□□□ -0.57
SAMD4B-211ENST00000601613 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.46□□□□□ -0.57
SAMD4B-211ENST00000601613 FAM9BQ8IZU0 186 aa11.46□□□□□ -0.58
SAMD4B-211ENST00000601613 TIMELESSQ9UNS1 1208 aa11.46□□□□□ -0.58
SAMD4B-211ENST00000601613 PLCH2O75038 1416 aa11.45□□□□□ -0.58
SAMD4B-211ENST00000601613 NAIPQ13075 1403 aa11.45□□□□□ -0.58
SAMD4B-211ENST00000601613 EHBP1L1Q8N3D4 1523 aa11.45□□□□□ -0.58
SAMD4B-211ENST00000601613 RTN4Q9NQC3 1192 aaKnown RBP11.44□□□□□ -0.58
SAMD4B-211ENST00000601613 NBR1Q14596 966 aa11.44□□□□□ -0.58
SAMD4B-211ENST00000601613 NCOA2Q15596 1464 aa11.44□□□□□ -0.58
SAMD4B-211ENST00000601613 EFCAB2Q5VUJ9 269 aa11.43□□□□□ -0.58
SAMD4B-211ENST00000601613 FANCIQ9NVI1 1328 aa11.43□□□□□ -0.58
SAMD4B-211ENST00000601613 L3MBTL2Q969R5 705 aa11.43□□□□□ -0.58
SAMD4B-211ENST00000601613 HFM1A2PYH4 1435 aa11.43□□□□□ -0.58
SAMD4B-211ENST00000601613 FANCAO15360 1455 aa11.43□□□□□ -0.58
SAMD4B-211ENST00000601613 COL17A1Q9UMD9 1497 aaPredicted RBP11.43□□□□□ -0.58
SAMD4B-211ENST00000601613 NEO1Q92859 1461 aa11.42□□□□□ -0.58
SAMD4B-211ENST00000601613 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
SAMD4B-211ENST00000601613 KDM6BO15054 1643 aa11.42□□□□□ -0.58
SAMD4B-211ENST00000601613 MYO5CQ9NQX4 1742 aa11.41□□□□□ -0.58
SAMD4B-211ENST00000601613 AKNAQ7Z591 1439 aa11.41□□□□□ -0.58
SAMD4B-211ENST00000601613 IL27Q8NEV9 243 aa11.41□□□□□ -0.58
SAMD4B-211ENST00000601613 ZNF644Q9H582 1327 aaPredicted RBP11.41□□□□□ -0.58
SAMD4B-211ENST00000601613 ARHGAP5Q13017 1502 aa11.41□□□□□ -0.58
SAMD4B-211ENST00000601613 GPATCH8Q9UKJ3 1502 aaKnown RBP11.41□□□□□ -0.58
SAMD4B-211ENST00000601613 ARAP3Q8WWN8 1544 aa11.4□□□□□ -0.58
SAMD4B-211ENST00000601613 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.59
SAMD4B-211ENST00000601613 CFDP1Q9UEE9 299 aaPredicted RBP11.4□□□□□ -0.59
SAMD4B-211ENST00000601613 ZNF777Q9ULD5 760 aaPredicted RBP11.4□□□□□ -0.59
SAMD4B-211ENST00000601613 MYOM3Q5VTT5 1437 aa11.4□□□□□ -0.59
SAMD4B-211ENST00000601613 PTPN23Q9H3S7 1636 aa11.4□□□□□ -0.59
SAMD4B-211ENST00000601613 SUPT6HQ7KZ85 1726 aaKnown RBP11.39□□□□□ -0.59
SAMD4B-211ENST00000601613 RAPGEF3O95398 923 aa11.39□□□□□ -0.59
SAMD4B-211ENST00000601613 NBPF8Q3BBV2 869 aa11.39□□□□□ -0.59
SAMD4B-211ENST00000601613 B4GALNT3Q6L9W6 998 aa11.39□□□□□ -0.59
SAMD4B-211ENST00000601613 DENND4BO75064 1496 aaPredicted RBP11.38□□□□□ -0.59
SAMD4B-211ENST00000601613 CDC42BPAQ5VT25 1732 aa11.38□□□□□ -0.59
SAMD4B-211ENST00000601613 CDC42BPBQ9Y5S2 1711 aa11.38□□□□□ -0.59
SAMD4B-211ENST00000601613 ZNF326Q5BKZ1 582 aaKnown RBP11.38□□□□□ -0.59
SAMD4B-211ENST00000601613 PREX2Q70Z35 1606 aa11.38□□□□□ -0.59
SAMD4B-211ENST00000601613 CFAP74Q9C0B2 1584 aa11.38□□□□□ -0.59
SAMD4B-211ENST00000601613 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
SAMD4B-211ENST00000601613 ADGRL1O94910 1474 aa11.37□□□□□ -0.59
SAMD4B-211ENST00000601613 SCAPERQ9BY12 1400 aa11.37□□□□□ -0.59
SAMD4B-211ENST00000601613 MRS2Q9HD23 443 aa11.37□□□□□ -0.59
SAMD4B-211ENST00000601613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.37□□□□□ -0.59
SAMD4B-211ENST00000601613 UBE2Q2Q8WVN8 375 aa11.35□□□□□ -0.59
SAMD4B-211ENST00000601613 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.59
SAMD4B-211ENST00000601613 HNRNPMP52272 730 aaKnown RBP eCLIP11.33□□□□□ -0.59
SAMD4B-211ENST00000601613 PRKRIP1Q9H875 184 aaPredicted RBP11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms