RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 FOXD1Q16676 465 aa14.79□□□□□ -0.04
ZNF558-207ENST00000601372 CCDC136Q96JN2 1154 aa14.79□□□□□ -0.04
ZNF558-207ENST00000601372 EID1Q9Y6B2 187 aa14.79□□□□□ -0.04
ZNF558-207ENST00000601372 WDR43Q15061 677 aaKnown RBP eCLIP14.79□□□□□ -0.04
ZNF558-207ENST00000601372 PKD2Q13563 968 aa14.78□□□□□ -0.04
ZNF558-207ENST00000601372 NUTM2DQ5VT03 806 aaPredicted RBP14.78□□□□□ -0.04
ZNF558-207ENST00000601372 NUP155O75694 1391 aa14.77□□□□□ -0.04
ZNF558-207ENST00000601372 SETD5Q9C0A6 1442 aa14.77□□□□□ -0.05
ZNF558-207ENST00000601372 RSPH4AQ5TD94 716 aa14.76□□□□□ -0.05
ZNF558-207ENST00000601372 RAB3GAP2Q9H2M9 1393 aa14.76□□□□□ -0.05
ZNF558-207ENST00000601372 CDCA8Q53HL2 280 aa14.74□□□□□ -0.05
ZNF558-207ENST00000601372 SRPK2P78362 688 aaKnown RBP14.73□□□□□ -0.05
ZNF558-207ENST00000601372 SOX12O15370 315 aa14.72□□□□□ -0.05
ZNF558-207ENST00000601372 SYNJ2O15056 1496 aa14.7□□□□□ -0.06
ZNF558-207ENST00000601372 ARHGAP5Q13017 1502 aa14.69□□□□□ -0.06
ZNF558-207ENST00000601372 URB2Q14146 1524 aaKnown RBP14.69□□□□□ -0.06
ZNF558-207ENST00000601372 KNSTRNQ9Y448 316 aa14.69□□□□□ -0.06
ZNF558-207ENST00000601372 PAK3O75914 559 aaPredicted RBP14.69□□□□□ -0.06
ZNF558-207ENST00000601372 TNNT2P45379 298 aaPredicted RBP14.68□□□□□ -0.06
ZNF558-207ENST00000601372 ARXQ96QS3 562 aa14.67□□□□□ -0.06
ZNF558-207ENST00000601372 PEG3Q9GZU2 1588 aa14.67□□□□□ -0.06
ZNF558-207ENST00000601372 MPHOSPH9Q99550 1183 aa14.66□□□□□ -0.06
ZNF558-207ENST00000601372 KIF21AQ7Z4S6 1674 aa14.66□□□□□ -0.06
ZNF558-207ENST00000601372 DHX57Q6P158 1386 aaKnown RBP14.64□□□□□ -0.07
ZNF558-207ENST00000601372 HSPA5P11021 654 aaKnown RBP14.64□□□□□ -0.07
ZNF558-207ENST00000601372 CFAP53Q96M91 514 aa14.63□□□□□ -0.07
ZNF558-207ENST00000601372 ZNF608Q9ULD9 1512 aaPredicted RBP14.63□□□□□ -0.07
ZNF558-207ENST00000601372 ANP32EQ9BTT0 268 aa14.62□□□□□ -0.07
ZNF558-207ENST00000601372 ABCA10Q8WWZ4 1543 aa14.62□□□□□ -0.07
ZNF558-207ENST00000601372 MAGI1Q96QZ7 1491 aaPredicted RBP14.61□□□□□ -0.07
ZNF558-207ENST00000601372 TMF1P82094 1093 aa14.6□□□□□ -0.07
ZNF558-207ENST00000601372 CUL7Q14999 1698 aa14.6□□□□□ -0.07
ZNF558-207ENST00000601372 KIF21BO75037 1637 aa14.6□□□□□ -0.07
ZNF558-207ENST00000601372 B4GALNT3Q6L9W6 998 aa14.59□□□□□ -0.07
ZNF558-207ENST00000601372 CCDC9Q9Y3X0 531 aaKnown RBP14.59□□□□□ -0.07
ZNF558-207ENST00000601372 CC2D1BQ5T0F9 858 aaKnown RBP14.58□□□□□ -0.08
ZNF558-207ENST00000601372 IQGAP2Q13576 1575 aa14.58□□□□□ -0.08
ZNF558-207ENST00000601372 ERICH3Q5RHP9 1530 aa14.58□□□□□ -0.08
ZNF558-207ENST00000601372 NUTM2FA1L443 756 aa14.58□□□□□ -0.08
ZNF558-207ENST00000601372 ZNF644Q9H582 1327 aaPredicted RBP14.57□□□□□ -0.08
ZNF558-207ENST00000601372 GRIN2AQ12879 1464 aa14.57□□□□□ -0.08
ZNF558-207ENST00000601372 ROCK2O75116 1388 aaKnown RBP14.57□□□□□ -0.08
ZNF558-207ENST00000601372 HDGFL2Q7Z4V5 671 aaPredicted RBP14.54□□□□□ -0.08
ZNF558-207ENST00000601372 AFAP1Q8N556 730 aa14.54□□□□□ -0.08
ZNF558-207ENST00000601372 HECW1Q76N89 1606 aa14.54□□□□□ -0.08
ZNF558-207ENST00000601372 KIAA0586Q9BVV6 1533 aa14.54□□□□□ -0.08
ZNF558-207ENST00000601372 CCER2I3L3R5 266 aa14.54□□□□□ -0.08
ZNF558-207ENST00000601372 CSB-PGBD3P0DP91 1061 aa14.53□□□□□ -0.08
ZNF558-207ENST00000601372 LAS1LQ9Y4W2 734 aaKnown RBP14.53□□□□□ -0.08
ZNF558-207ENST00000601372 CASKIN1Q8WXD9 1431 aa14.53□□□□□ -0.08
ZNF558-207ENST00000601372 NPHP1O15259 732 aa14.53□□□□□ -0.08
ZNF558-207ENST00000601372 PPP4R2Q9NY27 417 aa14.53□□□□□ -0.08
ZNF558-207ENST00000601372 EFCAB5A4FU69 1503 aa14.52□□□□□ -0.08
ZNF558-207ENST00000601372 U2SURPO15042 1029 aaKnown RBP14.52□□□□□ -0.08
ZNF558-207ENST00000601372 UACAQ9BZF9 1416 aa14.52□□□□□ -0.09
ZNF558-207ENST00000601372 NGDNQ8NEJ9 315 aaKnown RBP14.51□□□□□ -0.09
ZNF558-207ENST00000601372 NUDCQ9Y266 331 aa14.51□□□□□ -0.09
ZNF558-207ENST00000601372 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.51□□□□□ -0.09
ZNF558-207ENST00000601372 MYOM3Q5VTT5 1437 aa14.5□□□□□ -0.09
ZNF558-207ENST00000601372 RAPGEF3O95398 923 aa14.5□□□□□ -0.09
ZNF558-207ENST00000601372 MAPK8IP3Q9UPT6 1336 aa14.5□□□□□ -0.09
ZNF558-207ENST00000601372 RBM19Q9Y4C8 960 aaKnown RBP14.5□□□□□ -0.09
ZNF558-207ENST00000601372 NEUROD2Q15784 382 aa14.49□□□□□ -0.09
ZNF558-207ENST00000601372 TSHZ2Q9NRE2 1034 aa14.49□□□□□ -0.09
ZNF558-207ENST00000601372 TIMELESSQ9UNS1 1208 aa14.49□□□□□ -0.09
ZNF558-207ENST00000601372 FYCO1Q9BQS8 1478 aa14.49□□□□□ -0.09
ZNF558-207ENST00000601372 CCDC144AA2RUR9 1427 aa14.49□□□□□ -0.09
ZNF558-207ENST00000601372 TRAK1Q9UPV9 953 aa14.48□□□□□ -0.09
ZNF558-207ENST00000601372 EIF3AQ14152 1382 aaKnown RBP14.47□□□□□ -0.09
ZNF558-207ENST00000601372 KIF15Q9NS87 1388 aa14.47□□□□□ -0.09
ZNF558-207ENST00000601372 NCOA2Q15596 1464 aa14.47□□□□□ -0.09
ZNF558-207ENST00000601372 MEX3CQ5U5Q3 659 aaKnown RBP14.47□□□□□ -0.09
ZNF558-207ENST00000601372 MORC1Q86VD1 984 aa14.46□□□□□ -0.09
ZNF558-207ENST00000601372 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.09
ZNF558-207ENST00000601372 LRRC9Q6ZRR7 1453 aa14.45□□□□□ -0.1
ZNF558-207ENST00000601372 VGFO15240 615 aaPredicted RBP14.45□□□□□ -0.1
ZNF558-207ENST00000601372 UPF2Q9HAU5 1272 aaKnown RBP14.44□□□□□ -0.1
ZNF558-207ENST00000601372 PRXQ9BXM0 1461 aa14.44□□□□□ -0.1
ZNF558-207ENST00000601372 SCAPERQ9BY12 1400 aa14.44□□□□□ -0.1
ZNF558-207ENST00000601372 CDK13Q14004 1512 aaKnown RBP14.44□□□□□ -0.1
ZNF558-207ENST00000601372 CD109Q6YHK3 1445 aa14.43□□□□□ -0.1
ZNF558-207ENST00000601372 FGD6Q6ZV73 1430 aa14.42□□□□□ -0.1
ZNF558-207ENST00000601372 L3MBTL2Q969R5 705 aa14.42□□□□□ -0.1
ZNF558-207ENST00000601372 ARAP1Q96P48 1450 aa14.42□□□□□ -0.1
ZNF558-207ENST00000601372 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.42□□□□□ -0.1
ZNF558-207ENST00000601372 PLB1Q6P1J6 1458 aa14.41□□□□□ -0.1
ZNF558-207ENST00000601372 HSP90AA1P07900 732 aaKnown RBP14.41□□□□□ -0.1
ZNF558-207ENST00000601372 EHBP1L1Q8N3D4 1523 aa14.41□□□□□ -0.1
ZNF558-207ENST00000601372 POGZQ7Z3K3 1410 aa14.41□□□□□ -0.1
ZNF558-207ENST00000601372 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.4□□□□□ -0.1
ZNF558-207ENST00000601372 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
ZNF558-207ENST00000601372 TROQ12816 1431 aaPredicted RBP14.39□□□□□ -0.11
ZNF558-207ENST00000601372 PNNQ9H307 717 aaKnown RBP14.39□□□□□ -0.11
ZNF558-207ENST00000601372 NOP58Q9Y2X3 529 aaKnown RBP14.39□□□□□ -0.11
ZNF558-207ENST00000601372 SUPT6HQ7KZ85 1726 aaKnown RBP14.39□□□□□ -0.11
ZNF558-207ENST00000601372 ATF3P18847 181 aa14.39□□□□□ -0.11
ZNF558-207ENST00000601372 EIF4G3O43432 1585 aaKnown RBP14.38□□□□□ -0.11
ZNF558-207ENST00000601372 MYH16Q9H6N6 1097 aa14.37□□□□□ -0.11
ZNF558-207ENST00000601372 PHLDB1Q86UU1 1377 aa14.37□□□□□ -0.11
ZNF558-207ENST00000601372 PLEKHH2Q8IVE3 1493 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms