RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 WASHC2AQ641Q2 1341 aa20.25■□□□□ 0.83
SMG9-211ENST00000601170 CDK11AQ9UQ88 783 aaPredicted RBP20.24■□□□□ 0.83
SMG9-211ENST00000601170 L3MBTL2Q969R5 705 aa20.24■□□□□ 0.83
SMG9-211ENST00000601170 BCANQ96GW7 911 aa20.23■□□□□ 0.83
SMG9-211ENST00000601170 EIF4G2P78344 907 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMG9-211ENST00000601170 ANKRD30BQ9BXX2 1392 aa20.22■□□□□ 0.83
SMG9-211ENST00000601170 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
SMG9-211ENST00000601170 MAGI1Q96QZ7 1491 aaPredicted RBP20.21■□□□□ 0.83
SMG9-211ENST00000601170 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
SMG9-211ENST00000601170 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
SMG9-211ENST00000601170 TSHZ2Q9NRE2 1034 aa20.2■□□□□ 0.82
SMG9-211ENST00000601170 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.82
SMG9-211ENST00000601170 ITSN2Q9NZM3 1697 aa20.2■□□□□ 0.82
SMG9-211ENST00000601170 CAMSAP2Q08AD1 1489 aa20.18■□□□□ 0.82
SMG9-211ENST00000601170 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
SMG9-211ENST00000601170 PLB1Q6P1J6 1458 aa20.18■□□□□ 0.82
SMG9-211ENST00000601170 TEX14Q8IWB6 1497 aa20.18■□□□□ 0.82
SMG9-211ENST00000601170 NEFLP07196 543 aa20.17■□□□□ 0.82
SMG9-211ENST00000601170 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
SMG9-211ENST00000601170 MYT1Q01538 1121 aa20.16■□□□□ 0.82
SMG9-211ENST00000601170 CHMP7Q8WUX9 453 aaPredicted RBP20.16■□□□□ 0.82
SMG9-211ENST00000601170 ADGBQ8N7X0 1667 aa20.16■□□□□ 0.82
SMG9-211ENST00000601170 ADCY10Q96PN6 1610 aa20.16■□□□□ 0.82
SMG9-211ENST00000601170 CNTLNQ9NXG0 1405 aa20.15■□□□□ 0.82
SMG9-211ENST00000601170 SLC4A1APQ9BWU0 796 aaKnown RBP20.15■□□□□ 0.82
SMG9-211ENST00000601170 KIF14Q15058 1648 aa20.15■□□□□ 0.82
SMG9-211ENST00000601170 CFDP1Q9UEE9 299 aaPredicted RBP20.14■□□□□ 0.81
SMG9-211ENST00000601170 GPATCH8Q9UKJ3 1502 aaKnown RBP20.13■□□□□ 0.81
SMG9-211ENST00000601170 NCOA1Q15788 1441 aa20.13■□□□□ 0.81
SMG9-211ENST00000601170 NBPF8Q3BBV2 869 aa20.13■□□□□ 0.81
SMG9-211ENST00000601170 CROCC2H7BZ55 1655 aa20.12■□□□□ 0.81
SMG9-211ENST00000601170 PZPP20742 1482 aa20.12■□□□□ 0.81
SMG9-211ENST00000601170 CCDC7Q96M83 1385 aa20.11■□□□□ 0.81
SMG9-211ENST00000601170 C11orf95C9JLR9 678 aaPredicted RBP20.1■□□□□ 0.81
SMG9-211ENST00000601170 HNRNPUQ00839 825 aaKnown RBP eCLIP20.1■□□□□ 0.81
SMG9-211ENST00000601170 CARMIL2Q6F5E8 1435 aa20.1■□□□□ 0.81
SMG9-211ENST00000601170 FBLN2P98095 1184 aa20.09■□□□□ 0.81
SMG9-211ENST00000601170 ADGRL2O95490 1459 aa20.08■□□□□ 0.81
SMG9-211ENST00000601170 POLR1AO95602 1720 aaPredicted RBP20.08■□□□□ 0.8
SMG9-211ENST00000601170 NUP160Q12769 1436 aa20.08■□□□□ 0.8
SMG9-211ENST00000601170 ZNF777Q9ULD5 760 aaPredicted RBP20.08■□□□□ 0.8
SMG9-211ENST00000601170 JPH4Q96JJ6 628 aa20.06■□□□□ 0.8
SMG9-211ENST00000601170 SPATA31E1Q6ZUB1 1445 aa20.05■□□□□ 0.8
SMG9-211ENST00000601170 CDC42BPAQ5VT25 1732 aa20.03■□□□□ 0.8
SMG9-211ENST00000601170 KIAA1107Q9UPP5 1409 aa20.02■□□□□ 0.8
SMG9-211ENST00000601170 PRKRIP1Q9H875 184 aaPredicted RBP20.02■□□□□ 0.8
SMG9-211ENST00000601170 ANKRD30AQ9BXX3 1397 aa20.02■□□□□ 0.79
SMG9-211ENST00000601170 ABCA8O94911 1581 aa20.01■□□□□ 0.79
SMG9-211ENST00000601170 CCDC184Q52MB2 194 aa20.01■□□□□ 0.79
SMG9-211ENST00000601170 MBD5Q9P267 1494 aa20.01■□□□□ 0.79
SMG9-211ENST00000601170 KIF7Q2M1P5 1343 aa20■□□□□ 0.79
SMG9-211ENST00000601170 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
SMG9-211ENST00000601170 ABCC10Q5T3U5 1492 aa19.98■□□□□ 0.79
SMG9-211ENST00000601170 PLEKHD1A6NEE1 506 aa19.97■□□□□ 0.79
SMG9-211ENST00000601170 PKD2Q13563 968 aa19.97■□□□□ 0.79
SMG9-211ENST00000601170 ATP10BO94823 1461 aa19.96■□□□□ 0.79
SMG9-211ENST00000601170 SHANK2Q9UPX8 1470 aa19.95■□□□□ 0.78
SMG9-211ENST00000601170 C9orf84Q5VXU9 1444 aa19.94■□□□□ 0.78
SMG9-211ENST00000601170 MRS2Q9HD23 443 aa19.93■□□□□ 0.78
SMG9-211ENST00000601170 FAM9BQ8IZU0 186 aa19.92■□□□□ 0.78
SMG9-211ENST00000601170 BCORL1Q5H9F3 1711 aa19.91■□□□□ 0.78
SMG9-211ENST00000601170 USP47Q96K76 1375 aa19.91■□□□□ 0.78
SMG9-211ENST00000601170 ZNF326Q5BKZ1 582 aaKnown RBP19.91■□□□□ 0.78
SMG9-211ENST00000601170 KDM5CP41229 1560 aa19.9■□□□□ 0.78
SMG9-211ENST00000601170 NUP155O75694 1391 aa19.89■□□□□ 0.77
SMG9-211ENST00000601170 IRX6P78412 446 aaPredicted RBP19.88■□□□□ 0.77
SMG9-211ENST00000601170 KDM5DQ9BY66 1539 aa19.87■□□□□ 0.77
SMG9-211ENST00000601170 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
SMG9-211ENST00000601170 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
SMG9-211ENST00000601170 ARHGEF5Q12774 1597 aa19.86■□□□□ 0.77
SMG9-211ENST00000601170 ZBED9Q6R2W3 1325 aa19.85■□□□□ 0.77
SMG9-211ENST00000601170 UHRF1BP1Q6BDS2 1440 aa19.85■□□□□ 0.77
SMG9-211ENST00000601170 DHX29Q7Z478 1369 aaKnown RBP19.84■□□□□ 0.77
SMG9-211ENST00000601170 RALGAPBQ86X10 1494 aa19.84■□□□□ 0.77
SMG9-211ENST00000601170 RBM19Q9Y4C8 960 aaKnown RBP19.84■□□□□ 0.77
SMG9-211ENST00000601170 KIF15Q9NS87 1388 aa19.83■□□□□ 0.77
SMG9-211ENST00000601170 ARHGEF12Q9NZN5 1544 aa19.83■□□□□ 0.76
SMG9-211ENST00000601170 HNRNPMP52272 730 aaKnown RBP eCLIP19.82■□□□□ 0.76
SMG9-211ENST00000601170 POLR3GLQ9BT43 218 aa19.82■□□□□ 0.76
SMG9-211ENST00000601170 CDC42BPBQ9Y5S2 1711 aa19.82■□□□□ 0.76
SMG9-211ENST00000601170 PTPRGP23470 1445 aa19.81■□□□□ 0.76
SMG9-211ENST00000601170 SAMD9LQ8IVG5 1584 aa19.81■□□□□ 0.76
SMG9-211ENST00000601170 PREX2Q70Z35 1606 aa19.81■□□□□ 0.76
SMG9-211ENST00000601170 ARID4BQ4LE39 1312 aaPredicted RBP19.8■□□□□ 0.76
SMG9-211ENST00000601170 CCDC141Q6ZP82 1450 aa19.79■□□□□ 0.76
SMG9-211ENST00000601170 ERICH6BQ5W0A0 696 aa19.78■□□□□ 0.76
SMG9-211ENST00000601170 CARD11Q9BXL7 1154 aa19.77■□□□□ 0.75
SMG9-211ENST00000601170 CNGB1Q14028 1251 aaPredicted RBP19.76■□□□□ 0.75
SMG9-211ENST00000601170 ANP32EQ9BTT0 268 aa19.75■□□□□ 0.75
SMG9-211ENST00000601170 FAM135AQ9P2D6 1515 aa19.74■□□□□ 0.75
SMG9-211ENST00000601170 ROCK2O75116 1388 aaKnown RBP19.74■□□□□ 0.75
SMG9-211ENST00000601170 CHD1O14646 1710 aa19.74■□□□□ 0.75
SMG9-211ENST00000601170 KDM2AQ9Y2K7 1162 aa19.73■□□□□ 0.75
SMG9-211ENST00000601170 PPP4R2Q9NY27 417 aa19.72■□□□□ 0.75
SMG9-211ENST00000601170 DCAF11Q8TEB1 546 aa19.71■□□□□ 0.75
SMG9-211ENST00000601170 SYCP2Q9BX26 1530 aa19.71■□□□□ 0.75
SMG9-211ENST00000601170 TTC37Q6PGP7 1564 aa19.7■□□□□ 0.74
SMG9-211ENST00000601170 RSPH4AQ5TD94 716 aa19.7■□□□□ 0.74
SMG9-211ENST00000601170 ST20-MTHFSA0A0A6YYL1 179 aa19.69■□□□□ 0.74
SMG9-211ENST00000601170 ARHGAP5Q13017 1502 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms