RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 FMN1Q68DA7 1419 aa13.79□□□□□ -0.2
CCDC9-206ENST00000601154 ARHGAP35Q9NRY4 1499 aa13.79□□□□□ -0.2
CCDC9-206ENST00000601154 HECW1Q76N89 1606 aa13.79□□□□□ -0.2
CCDC9-206ENST00000601154 SIGLEC1Q9BZZ2 1709 aa13.78□□□□□ -0.2
CCDC9-206ENST00000601154 FBXO41Q8TF61 875 aa13.77□□□□□ -0.21
CCDC9-206ENST00000601154 MAGI2Q86UL8 1455 aa13.76□□□□□ -0.21
CCDC9-206ENST00000601154 EFCAB2Q5VUJ9 269 aa13.75□□□□□ -0.21
CCDC9-206ENST00000601154 CHIC1Q5VXU3 224 aa13.75□□□□□ -0.21
CCDC9-206ENST00000601154 CDK11AQ9UQ88 783 aaPredicted RBP13.75□□□□□ -0.21
CCDC9-206ENST00000601154 KIF14Q15058 1648 aa13.75□□□□□ -0.21
CCDC9-206ENST00000601154 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
CCDC9-206ENST00000601154 MYT1LQ9UL68 1186 aa13.72□□□□□ -0.21
CCDC9-206ENST00000601154 ARHGAP5Q13017 1502 aa13.72□□□□□ -0.21
CCDC9-206ENST00000601154 MYO5CQ9NQX4 1742 aa13.72□□□□□ -0.21
CCDC9-206ENST00000601154 CLIP1P30622 1438 aa13.72□□□□□ -0.21
CCDC9-206ENST00000601154 C9orf84Q5VXU9 1444 aa13.72□□□□□ -0.21
CCDC9-206ENST00000601154 ATP10AO60312 1499 aa13.71□□□□□ -0.21
CCDC9-206ENST00000601154 AFAP1Q8N556 730 aa13.7□□□□□ -0.22
CCDC9-206ENST00000601154 FER1L4A9Z1Z3 1794 aa13.7□□□□□ -0.22
CCDC9-206ENST00000601154 ZNF518AQ6AHZ1 1483 aa13.69□□□□□ -0.22
CCDC9-206ENST00000601154 CEBPAP49715 358 aaPredicted RBP13.69□□□□□ -0.22
CCDC9-206ENST00000601154 ARHGEF12Q9NZN5 1544 aa13.69□□□□□ -0.22
CCDC9-206ENST00000601154 LRRIQ1Q96JM4 1722 aa13.66□□□□□ -0.22
CCDC9-206ENST00000601154 KDM5CP41229 1560 aa13.65□□□□□ -0.22
CCDC9-206ENST00000601154 DIP2CQ9Y2E4 1556 aa13.64□□□□□ -0.23
CCDC9-206ENST00000601154 CASKIN1Q8WXD9 1431 aa13.63□□□□□ -0.23
CCDC9-206ENST00000601154 TRAPPC8Q9Y2L5 1435 aa13.63□□□□□ -0.23
CCDC9-206ENST00000601154 CCDC18Q5T9S5 1454 aa13.62□□□□□ -0.23
CCDC9-206ENST00000601154 PREX2Q70Z35 1606 aa13.61□□□□□ -0.23
CCDC9-206ENST00000601154 ABCA6Q8N139 1617 aa13.61□□□□□ -0.23
CCDC9-206ENST00000601154 ABCC1P33527 1531 aa13.61□□□□□ -0.23
CCDC9-206ENST00000601154 CERKQ8TCT0 537 aa13.61□□□□□ -0.23
CCDC9-206ENST00000601154 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
CCDC9-206ENST00000601154 PREX1Q8TCU6 1659 aa13.6□□□□□ -0.23
CCDC9-206ENST00000601154 ZNF777Q9ULD5 760 aaPredicted RBP13.6□□□□□ -0.23
CCDC9-206ENST00000601154 MLH3Q9UHC1 1453 aa13.6□□□□□ -0.23
CCDC9-206ENST00000601154 UHRF1BP1Q6BDS2 1440 aa13.59□□□□□ -0.23
CCDC9-206ENST00000601154 ESF1Q9H501 851 aaKnown RBP13.58□□□□□ -0.24
CCDC9-206ENST00000601154 REREQ9P2R6 1566 aa13.58□□□□□ -0.24
CCDC9-206ENST00000601154 ITSN2Q9NZM3 1697 aa13.57□□□□□ -0.24
CCDC9-206ENST00000601154 FYCO1Q9BQS8 1478 aa13.57□□□□□ -0.24
CCDC9-206ENST00000601154 AGLP35573 1532 aa13.54□□□□□ -0.24
CCDC9-206ENST00000601154 SYCP2Q9BX26 1530 aa13.54□□□□□ -0.24
CCDC9-206ENST00000601154 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
CCDC9-206ENST00000601154 SAMD9LQ8IVG5 1584 aa13.53□□□□□ -0.24
CCDC9-206ENST00000601154 C3P01024 1663 aa13.53□□□□□ -0.24
CCDC9-206ENST00000601154 KIDINS220Q9ULH0 1771 aa13.53□□□□□ -0.24
CCDC9-206ENST00000601154 HNRNPMP52272 730 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCDC9-206ENST00000601154 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
CCDC9-206ENST00000601154 SPAG9O60271 1321 aaKnown RBP13.52□□□□□ -0.25
CCDC9-206ENST00000601154 GPATCH8Q9UKJ3 1502 aaKnown RBP13.52□□□□□ -0.25
CCDC9-206ENST00000601154 STRCQ7RTU9 1775 aa13.5□□□□□ -0.25
CCDC9-206ENST00000601154 CFDP1Q9UEE9 299 aaPredicted RBP13.5□□□□□ -0.25
CCDC9-206ENST00000601154 CNTLNQ9NXG0 1405 aa13.49□□□□□ -0.25
CCDC9-206ENST00000601154 CCNB3Q8WWL7 1395 aa13.49□□□□□ -0.25
CCDC9-206ENST00000601154 MTUS2Q5JR59 1369 aa13.48□□□□□ -0.25
CCDC9-206ENST00000601154 ATP7AQ04656 1500 aa13.47□□□□□ -0.25
CCDC9-206ENST00000601154 PTPRTO14522 1441 aa13.47□□□□□ -0.25
CCDC9-206ENST00000601154 SUPT6HQ7KZ85 1726 aaKnown RBP13.45□□□□□ -0.26
CCDC9-206ENST00000601154 PLEKHH2Q8IVE3 1493 aa13.45□□□□□ -0.26
CCDC9-206ENST00000601154 NCOA1Q15788 1441 aa13.45□□□□□ -0.26
CCDC9-206ENST00000601154 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
CCDC9-206ENST00000601154 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
CCDC9-206ENST00000601154 ZMYM3Q14202 1370 aa13.45□□□□□ -0.26
CCDC9-206ENST00000601154 ZNF644Q9H582 1327 aaPredicted RBP13.44□□□□□ -0.26
CCDC9-206ENST00000601154 A2MP01023 1474 aa13.44□□□□□ -0.26
CCDC9-206ENST00000601154 GGT6Q6P531 493 aa13.44□□□□□ -0.26
CCDC9-206ENST00000601154 NPATQ14207 1427 aa13.43□□□□□ -0.26
CCDC9-206ENST00000601154 SETD1BQ9UPS6 1966 aaKnown RBP13.43□□□□□ -0.26
CCDC9-206ENST00000601154 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
CCDC9-206ENST00000601154 PLXNC1O60486 1568 aa13.42□□□□□ -0.26
CCDC9-206ENST00000601154 NCKAP5LQ9HCH0 1330 aa13.41□□□□□ -0.26
CCDC9-206ENST00000601154 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
CCDC9-206ENST00000601154 MROH2AA6NES4 1674 aa13.41□□□□□ -0.26
CCDC9-206ENST00000601154 CLTCQ00610 1675 aaKnown RBP13.41□□□□□ -0.26
CCDC9-206ENST00000601154 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
CCDC9-206ENST00000601154 EHBP1L1Q8N3D4 1523 aa13.4□□□□□ -0.26
CCDC9-206ENST00000601154 LTBP4Q8N2S1 1624 aa13.4□□□□□ -0.26
CCDC9-206ENST00000601154 MYO3AQ8NEV4 1616 aa13.39□□□□□ -0.27
CCDC9-206ENST00000601154 PTPRKQ15262 1439 aa13.39□□□□□ -0.27
CCDC9-206ENST00000601154 CEP162Q5TB80 1403 aa13.38□□□□□ -0.27
CCDC9-206ENST00000601154 ZNF335Q9H4Z2 1342 aaPredicted RBP13.38□□□□□ -0.27
CCDC9-206ENST00000601154 MBD5Q9P267 1494 aa13.37□□□□□ -0.27
CCDC9-206ENST00000601154 CEP170BQ9Y4F5 1589 aaPredicted RBP13.37□□□□□ -0.27
CCDC9-206ENST00000601154 ILDR2Q71H61 639 aa13.35□□□□□ -0.27
CCDC9-206ENST00000601154 ADGBQ8N7X0 1667 aa13.34□□□□□ -0.27
CCDC9-206ENST00000601154 PLA2R1Q13018 1463 aa13.34□□□□□ -0.27
CCDC9-206ENST00000601154 NCOA2Q15596 1464 aa13.34□□□□□ -0.27
CCDC9-206ENST00000601154 ZNF142P52746 1687 aaPredicted RBP13.34□□□□□ -0.27
CCDC9-206ENST00000601154 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.27
CCDC9-206ENST00000601154 RTEL1-TNFRSF6BF6WH68 1400 aa13.33□□□□□ -0.28
CCDC9-206ENST00000601154 KIF3BO15066 747 aa13.33□□□□□ -0.28
CCDC9-206ENST00000601154 CAMSAP2Q08AD1 1489 aa13.33□□□□□ -0.28
CCDC9-206ENST00000601154 IQSEC2Q5JU85 1478 aa13.33□□□□□ -0.28
CCDC9-206ENST00000601154 CCDC141Q6ZP82 1450 aa13.33□□□□□ -0.28
CCDC9-206ENST00000601154 TCOF1Q13428 1488 aaKnown RBP13.32□□□□□ -0.28
CCDC9-206ENST00000601154 PKD2Q13563 968 aa13.32□□□□□ -0.28
CCDC9-206ENST00000601154 FBXO31Q5XUX0 539 aaPredicted RBP13.32□□□□□ -0.28
CCDC9-206ENST00000601154 SPATA31D1Q6ZQQ2 1576 aa13.32□□□□□ -0.28
CCDC9-206ENST00000601154 UBAP1LF5GYI3 381 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms