RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 SCAPERQ9BY12 1400 aa28.08■■■□□ 2.09
USE1-208ENST00000600970 MLECQ14165 292 aa28.05■■■□□ 2.08
USE1-208ENST00000600970 MYO5CQ9NQX4 1742 aa28.01■■■□□ 2.07
USE1-208ENST00000600970 ATP10AO60312 1499 aa27.98■■■□□ 2.07
USE1-208ENST00000600970 ARHGEF12Q9NZN5 1544 aa27.97■■■□□ 2.07
USE1-208ENST00000600970 C9orf84Q5VXU9 1444 aa27.96■■■□□ 2.07
USE1-208ENST00000600970 EFCAB2Q5VUJ9 269 aa27.96■■■□□ 2.07
USE1-208ENST00000600970 ATP1B4Q9UN42 357 aaPredicted RBP27.96■■■□□ 2.07
USE1-208ENST00000600970 FMN1Q68DA7 1419 aa27.95■■■□□ 2.07
USE1-208ENST00000600970 KIF14Q15058 1648 aa27.94■■■□□ 2.06
USE1-208ENST00000600970 PREX1Q8TCU6 1659 aa27.92■■■□□ 2.06
USE1-208ENST00000600970 ARHGAP35Q9NRY4 1499 aa27.92■■■□□ 2.06
USE1-208ENST00000600970 UBTFP17480 764 aaKnown RBP27.91■■■□□ 2.06
USE1-208ENST00000600970 CERKQ8TCT0 537 aa27.91■■■□□ 2.06
USE1-208ENST00000600970 EHMT2Q96KQ7 1210 aa27.91■■■□□ 2.06
USE1-208ENST00000600970 CDK11AQ9UQ88 783 aaPredicted RBP27.9■■■□□ 2.06
USE1-208ENST00000600970 ZNF518AQ6AHZ1 1483 aa27.88■■■□□ 2.05
USE1-208ENST00000600970 KDM5CP41229 1560 aa27.86■■■□□ 2.05
USE1-208ENST00000600970 TROQ12816 1431 aaPredicted RBP27.86■■■□□ 2.05
USE1-208ENST00000600970 CEBPAP49715 358 aaPredicted RBP27.86■■■□□ 2.05
USE1-208ENST00000600970 LRRIQ1Q96JM4 1722 aa27.86■■■□□ 2.05
USE1-208ENST00000600970 ARHGAP5Q13017 1502 aa27.86■■■□□ 2.05
USE1-208ENST00000600970 AFAP1Q8N556 730 aa27.83■■■□□ 2.05
USE1-208ENST00000600970 CLIP1P30622 1438 aa27.8■■■□□ 2.04
USE1-208ENST00000600970 DIP2CQ9Y2E4 1556 aa27.8■■■□□ 2.04
USE1-208ENST00000600970 CDC42BPBQ9Y5S2 1711 aa27.8■■■□□ 2.04
USE1-208ENST00000600970 STRCQ7RTU9 1775 aa27.8■■■□□ 2.04
USE1-208ENST00000600970 REREQ9P2R6 1566 aa27.77■■■□□ 2.04
USE1-208ENST00000600970 MYT1LQ9UL68 1186 aa27.77■■■□□ 2.04
USE1-208ENST00000600970 ABCA6Q8N139 1617 aa27.75■■■□□ 2.03
USE1-208ENST00000600970 UHRF1BP1Q6BDS2 1440 aa27.75■■■□□ 2.03
USE1-208ENST00000600970 SETD1BQ9UPS6 1966 aaKnown RBP27.74■■■□□ 2.03
USE1-208ENST00000600970 MLH3Q9UHC1 1453 aa27.73■■■□□ 2.03
USE1-208ENST00000600970 C3P01024 1663 aa27.72■■■□□ 2.03
USE1-208ENST00000600970 PREX2Q70Z35 1606 aa27.72■■■□□ 2.03
USE1-208ENST00000600970 DMRT2Q9Y5R5 561 aa27.71■■■□□ 2.03
USE1-208ENST00000600970 ABCC1P33527 1531 aa27.69■■■□□ 2.02
USE1-208ENST00000600970 ITSN2Q9NZM3 1697 aa27.68■■■□□ 2.02
USE1-208ENST00000600970 TRAPPC8Q9Y2L5 1435 aa27.68■■■□□ 2.02
USE1-208ENST00000600970 AGLP35573 1532 aa27.67■■■□□ 2.02
USE1-208ENST00000600970 CCDC18Q5T9S5 1454 aa27.64■■■□□ 2.01
USE1-208ENST00000600970 KIDINS220Q9ULH0 1771 aa27.63■■■□□ 2.01
USE1-208ENST00000600970 CDC42BPAQ5VT25 1732 aa27.63■■■□□ 2.01
USE1-208ENST00000600970 CASKIN1Q8WXD9 1431 aa27.62■■■□□ 2.01
USE1-208ENST00000600970 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
USE1-208ENST00000600970 PTPRTO14522 1441 aa27.6■■■□□ 2.01
USE1-208ENST00000600970 ESF1Q9H501 851 aaKnown RBP27.6■■■□□ 2.01
USE1-208ENST00000600970 CNTLNQ9NXG0 1405 aa27.54■■■□□ 2
USE1-208ENST00000600970 SAMD9LQ8IVG5 1584 aa27.53■■■□□ 2
USE1-208ENST00000600970 DISP3Q9P2K9 1392 aa27.5■■□□□ 1.99
USE1-208ENST00000600970 MROH2AA6NES4 1674 aa27.5■■□□□ 1.99
USE1-208ENST00000600970 LTBP4Q8N2S1 1624 aa27.5■■□□□ 1.99
USE1-208ENST00000600970 NCOA1Q15788 1441 aa27.5■■□□□ 1.99
USE1-208ENST00000600970 FYCO1Q9BQS8 1478 aa27.49■■□□□ 1.99
USE1-208ENST00000600970 ZNF777Q9ULD5 760 aaPredicted RBP27.48■■□□□ 1.99
USE1-208ENST00000600970 SYCP2Q9BX26 1530 aa27.47■■□□□ 1.99
USE1-208ENST00000600970 SUPT6HQ7KZ85 1726 aaKnown RBP27.47■■□□□ 1.99
USE1-208ENST00000600970 ILDR2Q71H61 639 aa27.46■■□□□ 1.99
USE1-208ENST00000600970 NPATQ14207 1427 aa27.45■■□□□ 1.98
USE1-208ENST00000600970 GPATCH8Q9UKJ3 1502 aaKnown RBP27.45■■□□□ 1.98
USE1-208ENST00000600970 CAMSAP1Q5T5Y3 1602 aa27.44■■□□□ 1.98
USE1-208ENST00000600970 HNRNPMP52272 730 aaKnown RBP eCLIP27.43■■□□□ 1.98
USE1-208ENST00000600970 ZMYM3Q14202 1370 aa27.43■■□□□ 1.98
USE1-208ENST00000600970 SPAG9O60271 1321 aaKnown RBP27.42■■□□□ 1.98
USE1-208ENST00000600970 IQSEC2Q5JU85 1478 aa27.42■■□□□ 1.98
USE1-208ENST00000600970 ATP7AQ04656 1500 aa27.4■■□□□ 1.98
USE1-208ENST00000600970 CLTCQ00610 1675 aaKnown RBP27.4■■□□□ 1.98
USE1-208ENST00000600970 PLXNC1O60486 1568 aa27.38■■□□□ 1.97
USE1-208ENST00000600970 INO80Q9ULG1 1556 aaPredicted RBP27.38■■□□□ 1.97
USE1-208ENST00000600970 SPATA31D1Q6ZQQ2 1576 aa27.37■■□□□ 1.97
USE1-208ENST00000600970 KIAA1107Q9UPP5 1409 aa27.36■■□□□ 1.97
USE1-208ENST00000600970 ZNF142P52746 1687 aaPredicted RBP27.34■■□□□ 1.97
USE1-208ENST00000600970 A2MP01023 1474 aa27.34■■□□□ 1.97
USE1-208ENST00000600970 PLEKHH2Q8IVE3 1493 aa27.34■■□□□ 1.97
USE1-208ENST00000600970 SOCS7O14512 581 aa27.34■■□□□ 1.97
USE1-208ENST00000600970 NCKAP5LQ9HCH0 1330 aa27.34■■□□□ 1.97
USE1-208ENST00000600970 MYO3AQ8NEV4 1616 aa27.34■■□□□ 1.97
USE1-208ENST00000600970 CFDP1Q9UEE9 299 aaPredicted RBP27.33■■□□□ 1.97
USE1-208ENST00000600970 CCNB3Q8WWL7 1395 aa27.3■■□□□ 1.96
USE1-208ENST00000600970 PTPRKQ15262 1439 aa27.29■■□□□ 1.96
USE1-208ENST00000600970 ADGBQ8N7X0 1667 aa27.28■■□□□ 1.96
USE1-208ENST00000600970 CEP170BQ9Y4F5 1589 aaPredicted RBP27.28■■□□□ 1.96
USE1-208ENST00000600970 PLA2R1Q13018 1463 aa27.28■■□□□ 1.96
USE1-208ENST00000600970 GGT6Q6P531 493 aa27.28■■□□□ 1.96
USE1-208ENST00000600970 ZNF335Q9H4Z2 1342 aaPredicted RBP27.27■■□□□ 1.96
USE1-208ENST00000600970 PKD2Q13563 968 aa27.25■■□□□ 1.95
USE1-208ENST00000600970 TCOF1Q13428 1488 aaKnown RBP27.25■■□□□ 1.95
USE1-208ENST00000600970 MTUS2Q5JR59 1369 aa27.24■■□□□ 1.95
USE1-208ENST00000600970 PPP6R1Q9UPN7 881 aa27.21■■□□□ 1.95
USE1-208ENST00000600970 TIAM1Q13009 1591 aa27.21■■□□□ 1.95
USE1-208ENST00000600970 ZNF644Q9H582 1327 aaPredicted RBP27.2■■□□□ 1.95
USE1-208ENST00000600970 MBD5Q9P267 1494 aa27.19■■□□□ 1.94
USE1-208ENST00000600970 UBAP1LF5GYI3 381 aa27.18■■□□□ 1.94
USE1-208ENST00000600970 DNMT1P26358 1616 aaKnown RBP27.16■■□□□ 1.94
USE1-208ENST00000600970 RTEL1-TNFRSF6BF6WH68 1400 aa27.15■■□□□ 1.94
USE1-208ENST00000600970 A2ML1A8K2U0 1454 aa27.14■■□□□ 1.94
USE1-208ENST00000600970 EHBP1L1Q8N3D4 1523 aa27.14■■□□□ 1.94
USE1-208ENST00000600970 DHX29Q7Z478 1369 aaKnown RBP27.11■■□□□ 1.93
USE1-208ENST00000600970 POLR1AO95602 1720 aaPredicted RBP27.09■■□□□ 1.93
USE1-208ENST00000600970 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms