RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	DISP3	Q9P2K9	1392 aa		18.93	■□□□□ 0.62
NUP62-222	ENST00000600935	SOCS7	O14512	581 aa		18.93	■□□□□ 0.62
NUP62-222	ENST00000600935	MLEC	Q14165	292 aa		18.93	■□□□□ 0.62
NUP62-222	ENST00000600935	SCAPER	Q9BY12	1400 aa		18.89	■□□□□ 0.61
NUP62-222	ENST00000600935	CSRNP3	Q8WYN3	585 aa		18.88	■□□□□ 0.61
NUP62-222	ENST00000600935	ATP10A	O60312	1499 aa		18.88	■□□□□ 0.61
NUP62-222	ENST00000600935	PLCH2	O75038	1416 aa		18.87	■□□□□ 0.61
NUP62-222	ENST00000600935	CDK13	Q14004	1512 aa	Known RBP	18.87	■□□□□ 0.61
NUP62-222	ENST00000600935	C9orf84	Q5VXU9	1444 aa		18.87	■□□□□ 0.61
NUP62-222	ENST00000600935	CEBPA	P49715	358 aa	Predicted RBP	18.86	■□□□□ 0.61
NUP62-222	ENST00000600935	RANGAP1	P46060	587 aa	Predicted RBP	18.85	■□□□□ 0.61
NUP62-222	ENST00000600935	SPATA31D1	Q6ZQQ2	1576 aa		18.85	■□□□□ 0.61
NUP62-222	ENST00000600935	SETD1B	Q9UPS6	1966 aa	Known RBP	18.81	■□□□□ 0.6
NUP62-222	ENST00000600935	UHRF1BP1	Q6BDS2	1440 aa		18.8	■□□□□ 0.6
NUP62-222	ENST00000600935	MYO5C	Q9NQX4	1742 aa		18.8	■□□□□ 0.6
NUP62-222	ENST00000600935	LTBP4	Q8N2S1	1624 aa		18.79	■□□□□ 0.6
NUP62-222	ENST00000600935	DMRT2	Q9Y5R5	561 aa		18.79	■□□□□ 0.6
NUP62-222	ENST00000600935	KDM5C	P41229	1560 aa		18.79	■□□□□ 0.6
NUP62-222	ENST00000600935	PTPRT	O14522	1441 aa		18.77	■□□□□ 0.6
NUP62-222	ENST00000600935	C3	P01024	1663 aa		18.77	■□□□□ 0.6
NUP62-222	ENST00000600935	DIP2C	Q9Y2E4	1556 aa		18.76	■□□□□ 0.59
NUP62-222	ENST00000600935	KIF14	Q15058	1648 aa		18.76	■□□□□ 0.59
NUP62-222	ENST00000600935	ZNF518A	Q6AHZ1	1483 aa		18.76	■□□□□ 0.59
NUP62-222	ENST00000600935	RERE	Q9P2R6	1566 aa		18.75	■□□□□ 0.59
NUP62-222	ENST00000600935	EFCAB2	Q5VUJ9	269 aa		18.73	■□□□□ 0.59
NUP62-222	ENST00000600935	ABCA6	Q8N139	1617 aa		18.73	■□□□□ 0.59
NUP62-222	ENST00000600935	EEA1	Q15075	1411 aa		18.72	■□□□□ 0.59
NUP62-222	ENST00000600935	AFAP1	Q8N556	730 aa		18.71	■□□□□ 0.59
NUP62-222	ENST00000600935	IQSEC2	Q5JU85	1478 aa		18.71	■□□□□ 0.59
NUP62-222	ENST00000600935	NCOA1	Q15788	1441 aa		18.68	■□□□□ 0.58
NUP62-222	ENST00000600935	AGL	P35573	1532 aa		18.68	■□□□□ 0.58
NUP62-222	ENST00000600935	ARHGAP5	Q13017	1502 aa		18.68	■□□□□ 0.58
NUP62-222	ENST00000600935	MLH3	Q9UHC1	1453 aa		18.67	■□□□□ 0.58
NUP62-222	ENST00000600935	CDC42BPB	Q9Y5S2	1711 aa		18.66	■□□□□ 0.58
NUP62-222	ENST00000600935	TRAPPC8	Q9Y2L5	1435 aa		18.66	■□□□□ 0.58
NUP62-222	ENST00000600935	LRRIQ1	Q96JM4	1722 aa		18.65	■□□□□ 0.58
NUP62-222	ENST00000600935	TRO	Q12816	1431 aa	Predicted RBP	18.65	■□□□□ 0.58
NUP62-222	ENST00000600935	FMN1	Q68DA7	1419 aa		18.62	■□□□□ 0.57
NUP62-222	ENST00000600935	ABCC1	P33527	1531 aa		18.62	■□□□□ 0.57
NUP62-222	ENST00000600935	KIDINS220	Q9ULH0	1771 aa		18.61	■□□□□ 0.57
NUP62-222	ENST00000600935	ARHGAP35	Q9NRY4	1499 aa		18.61	■□□□□ 0.57
NUP62-222	ENST00000600935	ITSN2	Q9NZM3	1697 aa		18.6	■□□□□ 0.57
NUP62-222	ENST00000600935	CAMSAP1	Q5T5Y3	1602 aa		18.6	■□□□□ 0.57
NUP62-222	ENST00000600935	PREX2	Q70Z35	1606 aa		18.6	■□□□□ 0.57
NUP62-222	ENST00000600935	CDK11A	Q9UQ88	783 aa	Predicted RBP	18.58	■□□□□ 0.56
NUP62-222	ENST00000600935	CNTLN	Q9NXG0	1405 aa		18.57	■□□□□ 0.56
NUP62-222	ENST00000600935	MROH2A	A6NES4	1674 aa		18.57	■□□□□ 0.56
NUP62-222	ENST00000600935	ATP1B4	Q9UN42	357 aa	Predicted RBP	18.57	■□□□□ 0.56
NUP62-222	ENST00000600935	MYT1L	Q9UL68	1186 aa		18.56	■□□□□ 0.56
NUP62-222	ENST00000600935	NPAT	Q14207	1427 aa		18.56	■□□□□ 0.56
NUP62-222	ENST00000600935	CLIP1	P30622	1438 aa		18.55	■□□□□ 0.56
NUP62-222	ENST00000600935	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	18.54	■□□□□ 0.56
NUP62-222	ENST00000600935	ZNF142	P52746	1687 aa	Predicted RBP	18.53	■□□□□ 0.56
NUP62-222	ENST00000600935	ESF1	Q9H501	851 aa	Known RBP	18.52	■□□□□ 0.56
NUP62-222	ENST00000600935	CDC42BPA	Q5VT25	1732 aa		18.52	■□□□□ 0.55
NUP62-222	ENST00000600935	NCKAP5L	Q9HCH0	1330 aa		18.51	■□□□□ 0.55
NUP62-222	ENST00000600935	SAMD9L	Q8IVG5	1584 aa		18.51	■□□□□ 0.55
NUP62-222	ENST00000600935	MYO3A	Q8NEV4	1616 aa		18.5	■□□□□ 0.55
NUP62-222	ENST00000600935	UBAP1L	F5GYI3	381 aa		18.5	■□□□□ 0.55
NUP62-222	ENST00000600935	ZMYM3	Q14202	1370 aa		18.49	■□□□□ 0.55
NUP62-222	ENST00000600935	PLA2R1	Q13018	1463 aa		18.49	■□□□□ 0.55
NUP62-222	ENST00000600935	TCOF1	Q13428	1488 aa	Known RBP	18.49	■□□□□ 0.55
NUP62-222	ENST00000600935	CLTC	Q00610	1675 aa	Known RBP	18.47	■□□□□ 0.55
NUP62-222	ENST00000600935	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	18.47	■□□□□ 0.55
NUP62-222	ENST00000600935	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.46	■□□□□ 0.55
NUP62-222	ENST00000600935	PLXNC1	O60486	1568 aa		18.46	■□□□□ 0.55
NUP62-222	ENST00000600935	PTPRK	Q15262	1439 aa		18.44	■□□□□ 0.54
NUP62-222	ENST00000600935	EHMT2	Q96KQ7	1210 aa		18.44	■□□□□ 0.54
NUP62-222	ENST00000600935	SYCP2	Q9BX26	1530 aa		18.44	■□□□□ 0.54
NUP62-222	ENST00000600935	MED1	Q15648	1581 aa	Predicted RBP	18.43	■□□□□ 0.54
NUP62-222	ENST00000600935	UBTF	P17480	764 aa	Known RBP	18.43	■□□□□ 0.54
NUP62-222	ENST00000600935	PKD2	Q13563	968 aa		18.43	■□□□□ 0.54
NUP62-222	ENST00000600935	CCDC18	Q5T9S5	1454 aa		18.41	■□□□□ 0.54
NUP62-222	ENST00000600935	INO80	Q9ULG1	1556 aa	Predicted RBP	18.41	■□□□□ 0.54
NUP62-222	ENST00000600935	ATP7A	Q04656	1500 aa		18.4	■□□□□ 0.54
NUP62-222	ENST00000600935	CASKIN1	Q8WXD9	1431 aa		18.4	■□□□□ 0.54
NUP62-222	ENST00000600935	HSPA1L	P34931	641 aa		18.38	■□□□□ 0.53
NUP62-222	ENST00000600935	SPAG9	O60271	1321 aa	Known RBP	18.37	■□□□□ 0.53
NUP62-222	ENST00000600935	A2M	P01023	1474 aa		18.37	■□□□□ 0.53
NUP62-222	ENST00000600935	GPATCH8	Q9UKJ3	1502 aa	Known RBP	18.37	■□□□□ 0.53
NUP62-222	ENST00000600935	DNMT1	P26358	1616 aa	Known RBP	18.37	■□□□□ 0.53
NUP62-222	ENST00000600935	NEURL4	Q96JN8	1562 aa		18.36	■□□□□ 0.53
NUP62-222	ENST00000600935	HNRNPM	P52272	730 aa	Known RBP eCLIP	18.35	■□□□□ 0.53	4e-7	■■■■□ 26.7
NUP62-222	ENST00000600935	PPP6R1	Q9UPN7	881 aa		18.35	■□□□□ 0.53
NUP62-222	ENST00000600935	A2ML1	A8K2U0	1454 aa		18.34	■□□□□ 0.53
NUP62-222	ENST00000600935	KIAA1107	Q9UPP5	1409 aa		18.33	■□□□□ 0.53
NUP62-222	ENST00000600935	POLR1A	O95602	1720 aa	Predicted RBP	18.33	■□□□□ 0.52
NUP62-222	ENST00000600935	ZNF777	Q9ULD5	760 aa	Predicted RBP	18.33	■□□□□ 0.52
NUP62-222	ENST00000600935	ALK	Q9UM73	1620 aa		18.33	■□□□□ 0.52
NUP62-222	ENST00000600935	CPS1	P31327	1500 aa		18.31	■□□□□ 0.52
NUP62-222	ENST00000600935	FYCO1	Q9BQS8	1478 aa		18.3	■□□□□ 0.52
NUP62-222	ENST00000600935	ADGB	Q8N7X0	1667 aa		18.3	■□□□□ 0.52
NUP62-222	ENST00000600935	SHANK2	Q9UPX8	1470 aa		18.29	■□□□□ 0.52
NUP62-222	ENST00000600935	PIP4K2B	P78356	416 aa		18.29	■□□□□ 0.52
NUP62-222	ENST00000600935	GGT6	Q6P531	493 aa		18.29	■□□□□ 0.52
NUP62-222	ENST00000600935	VWDE	Q8N2E2	1590 aa		18.28	■□□□□ 0.52
NUP62-222	ENST00000600935	PLEKHH2	Q8IVE3	1493 aa		18.27	■□□□□ 0.52
NUP62-222	ENST00000600935	SCAF1	Q9H7N4	1312 aa	Known RBP	18.27	■□□□□ 0.52
NUP62-222	ENST00000600935	TOM1	O60784	492 aa		18.25	■□□□□ 0.51
NUP62-222	ENST00000600935	MBD5	Q9P267	1494 aa		18.22	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms