RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
MIA-RAB4B-201ENST00000600729 FHOD3Q2V2M9 1422 aa17.18■□□□□ 0.34
MIA-RAB4B-201ENST00000600729 SETD1AO15047 1707 aaKnown RBP17.18■□□□□ 0.34
MIA-RAB4B-201ENST00000600729 ARHGEF12Q9NZN5 1544 aa17.16■□□□□ 0.34
MIA-RAB4B-201ENST00000600729 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
MIA-RAB4B-201ENST00000600729 NCOA1Q15788 1441 aa17.15■□□□□ 0.34
MIA-RAB4B-201ENST00000600729 AKNAQ7Z591 1439 aa17.15■□□□□ 0.34
MIA-RAB4B-201ENST00000600729 MLECQ14165 292 aa17.14■□□□□ 0.33
MIA-RAB4B-201ENST00000600729 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
MIA-RAB4B-201ENST00000600729 CEBPAP49715 358 aaPredicted RBP17.13■□□□□ 0.33
MIA-RAB4B-201ENST00000600729 RGS17Q9UGC6 210 aaPredicted RBP17.12■□□□□ 0.33
MIA-RAB4B-201ENST00000600729 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
MIA-RAB4B-201ENST00000600729 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
MIA-RAB4B-201ENST00000600729 EEA1Q15075 1411 aa17.11■□□□□ 0.33
MIA-RAB4B-201ENST00000600729 EFCAB5A4FU69 1503 aa17.1■□□□□ 0.33
MIA-RAB4B-201ENST00000600729 ZMYM4Q5VZL5 1548 aa17.1■□□□□ 0.33
MIA-RAB4B-201ENST00000600729 RANGAP1P46060 587 aaPredicted RBP17.09■□□□□ 0.33
MIA-RAB4B-201ENST00000600729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.08■□□□□ 0.32
MIA-RAB4B-201ENST00000600729 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
MIA-RAB4B-201ENST00000600729 CDK13Q14004 1512 aaKnown RBP17.06■□□□□ 0.32
MIA-RAB4B-201ENST00000600729 C3P01024 1663 aa17.06■□□□□ 0.32
MIA-RAB4B-201ENST00000600729 DENND4BO75064 1496 aaPredicted RBP17.05■□□□□ 0.32
MIA-RAB4B-201ENST00000600729 CAMSAP1Q5T5Y3 1602 aa17.03■□□□□ 0.32
MIA-RAB4B-201ENST00000600729 LRRIQ1Q96JM4 1722 aa17.02■□□□□ 0.32
MIA-RAB4B-201ENST00000600729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
MIA-RAB4B-201ENST00000600729 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
MIA-RAB4B-201ENST00000600729 CFAP74Q9C0B2 1584 aa16.99■□□□□ 0.31
MIA-RAB4B-201ENST00000600729 TOM1O60784 492 aa16.98■□□□□ 0.31
MIA-RAB4B-201ENST00000600729 ALKQ9UM73 1620 aa16.97■□□□□ 0.31
MIA-RAB4B-201ENST00000600729 MAGI2Q86UL8 1455 aa16.96■□□□□ 0.31
MIA-RAB4B-201ENST00000600729 ARHGAP35Q9NRY4 1499 aa16.96■□□□□ 0.31
MIA-RAB4B-201ENST00000600729 KIF14Q15058 1648 aa16.96■□□□□ 0.3
MIA-RAB4B-201ENST00000600729 HECW1Q76N89 1606 aa16.96■□□□□ 0.3
MIA-RAB4B-201ENST00000600729 POTEAQ6S8J7 498 aa16.95■□□□□ 0.3
MIA-RAB4B-201ENST00000600729 SUPT6HQ7KZ85 1726 aaKnown RBP16.93■□□□□ 0.3
MIA-RAB4B-201ENST00000600729 MYO5CQ9NQX4 1742 aa16.93■□□□□ 0.3
MIA-RAB4B-201ENST00000600729 PLEKHD1A6NEE1 506 aa16.93■□□□□ 0.3
MIA-RAB4B-201ENST00000600729 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
MIA-RAB4B-201ENST00000600729 NCKAP5LQ9HCH0 1330 aa16.9■□□□□ 0.3
MIA-RAB4B-201ENST00000600729 C9orf84Q5VXU9 1444 aa16.89■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 PLCH2O75038 1416 aa16.88■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 TRAPPC8Q9Y2L5 1435 aa16.88■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 ATP10AO60312 1499 aa16.87■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 CPS1P31327 1500 aa16.87■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 SCAPERQ9BY12 1400 aa16.86■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 CDC42BPBQ9Y5S2 1711 aa16.85■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 UPF1Q92900 1129 aaKnown RBP eCLIP16.85■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 PTPRKQ15262 1439 aa16.85■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 FMN1Q68DA7 1419 aa16.84■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 ZNF142P52746 1687 aaPredicted RBP16.84■□□□□ 0.29
MIA-RAB4B-201ENST00000600729 PLA2R1Q13018 1463 aa16.83■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 TCOF1Q13428 1488 aaKnown RBP16.82■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 KDM5CP41229 1560 aa16.81■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 TROQ12816 1431 aaPredicted RBP16.8■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 PREX2Q70Z35 1606 aa16.79■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 ABCA6Q8N139 1617 aa16.79■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 DIP2CQ9Y2E4 1556 aa16.78■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 PKD2Q13563 968 aa16.78■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 ARHGAP5Q13017 1502 aa16.77■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 CDC42BPAQ5VT25 1732 aa16.77■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 ATP1B4Q9UN42 357 aaPredicted RBP16.77■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 PPP6R1Q9UPN7 881 aa16.77■□□□□ 0.28
MIA-RAB4B-201ENST00000600729 ITSN2Q9NZM3 1697 aa16.76■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 MYO3AQ8NEV4 1616 aa16.76■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 ABCC1P33527 1531 aa16.75■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 SHANK2Q9UPX8 1470 aa16.74■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 POLR1AO95602 1720 aaPredicted RBP16.74■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 RNF17Q9BXT8 1623 aaKnown RBP16.72■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 EFCAB2Q5VUJ9 269 aa16.72■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 REREQ9P2R6 1566 aa16.72■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 KIDINS220Q9ULH0 1771 aa16.72■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 NPATQ14207 1427 aa16.71■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 AFAP1Q8N556 730 aa16.71■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 CEP170BQ9Y4F5 1589 aaPredicted RBP16.71■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 MROH2AA6NES4 1674 aa16.71■□□□□ 0.27
MIA-RAB4B-201ENST00000600729 CASKIN1Q8WXD9 1431 aa16.7■□□□□ 0.26
MIA-RAB4B-201ENST00000600729 CLIP1P30622 1438 aa16.69■□□□□ 0.26
MIA-RAB4B-201ENST00000600729 AGLP35573 1532 aa16.68■□□□□ 0.26
MIA-RAB4B-201ENST00000600729 SAMD9LQ8IVG5 1584 aa16.68■□□□□ 0.26
MIA-RAB4B-201ENST00000600729 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
MIA-RAB4B-201ENST00000600729 VWDEQ8N2E2 1590 aa16.67■□□□□ 0.26
MIA-RAB4B-201ENST00000600729 MLH3Q9UHC1 1453 aa16.67■□□□□ 0.26
MIA-RAB4B-201ENST00000600729 NEURL4Q96JN8 1562 aa16.66■□□□□ 0.26
MIA-RAB4B-201ENST00000600729 CDK11AQ9UQ88 783 aaPredicted RBP16.66■□□□□ 0.26
MIA-RAB4B-201ENST00000600729 FYCO1Q9BQS8 1478 aa16.65■□□□□ 0.26
MIA-RAB4B-201ENST00000600729 CNTLNQ9NXG0 1405 aa16.64■□□□□ 0.25
MIA-RAB4B-201ENST00000600729 ESF1Q9H501 851 aaKnown RBP16.64■□□□□ 0.25
MIA-RAB4B-201ENST00000600729 LRRC7Q96NW7 1537 aa16.62■□□□□ 0.25
MIA-RAB4B-201ENST00000600729 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
MIA-RAB4B-201ENST00000600729 STRCP1A6NGW2 1772 aa16.61■□□□□ 0.25
MIA-RAB4B-201ENST00000600729 SYCP2Q9BX26 1530 aa16.61■□□□□ 0.25
MIA-RAB4B-201ENST00000600729 GPATCH8Q9UKJ3 1502 aaKnown RBP16.59■□□□□ 0.25
MIA-RAB4B-201ENST00000600729 SYNMO15061 1565 aa16.59■□□□□ 0.25
MIA-RAB4B-201ENST00000600729 INO80Q9ULG1 1556 aaPredicted RBP16.58■□□□□ 0.24
MIA-RAB4B-201ENST00000600729 SETBP1Q9Y6X0 1596 aa16.56■□□□□ 0.24
MIA-RAB4B-201ENST00000600729 DNMT1P26358 1616 aaKnown RBP16.56■□□□□ 0.24
MIA-RAB4B-201ENST00000600729 PLXNC1O60486 1568 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms