RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 KDM5BQ9UGL1 1544 aa22.24■■□□□ 1.15
HIF3A-218ENST00000600383 CDC42BPAQ5VT25 1732 aa22.24■■□□□ 1.15
HIF3A-218ENST00000600383 ZCCHC11Q5TAX3 1644 aaKnown RBP22.23■■□□□ 1.15
HIF3A-218ENST00000600383 DNMT1P26358 1616 aaKnown RBP22.21■■□□□ 1.15
HIF3A-218ENST00000600383 HNRNPMP52272 730 aaKnown RBP eCLIP22.19■■□□□ 1.14
HIF3A-218ENST00000600383 TRIM52Q96A61 297 aa22.19■■□□□ 1.14
HIF3A-218ENST00000600383 MAPKBP1O60336 1514 aa22.17■■□□□ 1.14
HIF3A-218ENST00000600383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.17■■□□□ 1.14
HIF3A-218ENST00000600383 NEUROD1Q13562 356 aa22.15■■□□□ 1.14
HIF3A-218ENST00000600383 ROCK1Q13464 1354 aa22.15■■□□□ 1.14
HIF3A-218ENST00000600383 TTC37Q6PGP7 1564 aa22.15■■□□□ 1.14
HIF3A-218ENST00000600383 SIN3AQ96ST3 1273 aa22.15■■□□□ 1.14
HIF3A-218ENST00000600383 AKNAQ7Z591 1439 aa22.14■■□□□ 1.14
HIF3A-218ENST00000600383 NPM1P06748 294 aaKnown RBP eCLIP22.14■■□□□ 1.13
HIF3A-218ENST00000600383 TSPY4P0CV99 314 aa22.13■■□□□ 1.13
HIF3A-218ENST00000600383 TSPY10P0CW01 314 aa22.13■■□□□ 1.13
HIF3A-218ENST00000600383 CDC42BPBQ9Y5S2 1711 aa22.12■■□□□ 1.13
HIF3A-218ENST00000600383 ARHGAP5Q13017 1502 aa22.12■■□□□ 1.13
HIF3A-218ENST00000600383 GCC2Q8IWJ2 1684 aa22.11■■□□□ 1.13
HIF3A-218ENST00000600383 KDM6BO15054 1643 aa22.1■■□□□ 1.13
HIF3A-218ENST00000600383 PREX2Q70Z35 1606 aa22.1■■□□□ 1.13
HIF3A-218ENST00000600383 NCOA1Q15788 1441 aa22.09■■□□□ 1.13
HIF3A-218ENST00000600383 ANKRD30AQ9BXX3 1397 aa22.07■■□□□ 1.12
HIF3A-218ENST00000600383 WDR7Q9Y4E6 1490 aa22.06■■□□□ 1.12
HIF3A-218ENST00000600383 SAMD9LQ8IVG5 1584 aa22.06■■□□□ 1.12
HIF3A-218ENST00000600383 EFCAB2Q5VUJ9 269 aa22.05■■□□□ 1.12
HIF3A-218ENST00000600383 MYO5CQ9NQX4 1742 aa22.05■■□□□ 1.12
HIF3A-218ENST00000600383 PLCH2O75038 1416 aa22.04■■□□□ 1.12
HIF3A-218ENST00000600383 MBD5Q9P267 1494 aa22.04■■□□□ 1.12
HIF3A-218ENST00000600383 RSPH4AQ5TD94 716 aa22.04■■□□□ 1.12
HIF3A-218ENST00000600383 C9orf84Q5VXU9 1444 aa22.04■■□□□ 1.12
HIF3A-218ENST00000600383 ASXL2Q76L83 1435 aa22.04■■□□□ 1.12
HIF3A-218ENST00000600383 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
HIF3A-218ENST00000600383 MPHOSPH9Q99550 1183 aa22.03■■□□□ 1.12
HIF3A-218ENST00000600383 CROCC2H7BZ55 1655 aa22.02■■□□□ 1.12
HIF3A-218ENST00000600383 ADGRL2O95490 1459 aa22■■□□□ 1.11
HIF3A-218ENST00000600383 ADGBQ8N7X0 1667 aa22■■□□□ 1.11
HIF3A-218ENST00000600383 SYCP2Q9BX26 1530 aa22■■□□□ 1.11
HIF3A-218ENST00000600383 CCDC141Q6ZP82 1450 aa21.99■■□□□ 1.11
HIF3A-218ENST00000600383 ZNF316A6NFI3 1004 aaPredicted RBP21.99■■□□□ 1.11
HIF3A-218ENST00000600383 ARHGEF5Q12774 1597 aa21.98■■□□□ 1.11
HIF3A-218ENST00000600383 FOXD1Q16676 465 aa21.98■■□□□ 1.11
HIF3A-218ENST00000600383 SHANK2Q9UPX8 1470 aa21.97■■□□□ 1.11
HIF3A-218ENST00000600383 SLC4A1APQ9BWU0 796 aaKnown RBP21.97■■□□□ 1.11
HIF3A-218ENST00000600383 ACIN1Q9UKV3 1341 aaKnown RBP21.96■■□□□ 1.11
HIF3A-218ENST00000600383 ANKRD50Q9ULJ7 1429 aa21.96■■□□□ 1.11
HIF3A-218ENST00000600383 KIAA1107Q9UPP5 1409 aa21.95■■□□□ 1.1
HIF3A-218ENST00000600383 PLEKHH2Q8IVE3 1493 aa21.94■■□□□ 1.1
HIF3A-218ENST00000600383 KIF15Q9NS87 1388 aa21.94■■□□□ 1.1
HIF3A-218ENST00000600383 ARHGEF12Q9NZN5 1544 aa21.93■■□□□ 1.1
HIF3A-218ENST00000600383 DENND4BO75064 1496 aaPredicted RBP21.92■■□□□ 1.1
HIF3A-218ENST00000600383 TIMELESSQ9UNS1 1208 aa21.91■■□□□ 1.1
HIF3A-218ENST00000600383 AFAP1Q8N556 730 aa21.89■■□□□ 1.09
HIF3A-218ENST00000600383 TONSLQ96HA7 1378 aa21.89■■□□□ 1.09
HIF3A-218ENST00000600383 ABCA9Q8IUA7 1624 aa21.88■■□□□ 1.09
HIF3A-218ENST00000600383 FANCAO15360 1455 aa21.87■■□□□ 1.09
HIF3A-218ENST00000600383 TRAPPC8Q9Y2L5 1435 aa21.87■■□□□ 1.09
HIF3A-218ENST00000600383 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
HIF3A-218ENST00000600383 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
HIF3A-218ENST00000600383 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
HIF3A-218ENST00000600383 NUP155O75694 1391 aa21.85■■□□□ 1.09
HIF3A-218ENST00000600383 DIEXFQ68CQ4 756 aaKnown RBP21.85■■□□□ 1.09
HIF3A-218ENST00000600383 ABCC1P33527 1531 aa21.85■■□□□ 1.09
HIF3A-218ENST00000600383 ARAP3Q8WWN8 1544 aa21.84■■□□□ 1.09
HIF3A-218ENST00000600383 PPP1R15AO75807 674 aaPredicted RBP21.84■■□□□ 1.09
HIF3A-218ENST00000600383 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.09
HIF3A-218ENST00000600383 PZPP20742 1482 aa21.82■■□□□ 1.08
HIF3A-218ENST00000600383 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
HIF3A-218ENST00000600383 PKD2Q13563 968 aa21.82■■□□□ 1.08
HIF3A-218ENST00000600383 CD109Q6YHK3 1445 aa21.81■■□□□ 1.08
HIF3A-218ENST00000600383 MAST1Q9Y2H9 1570 aa21.8■■□□□ 1.08
HIF3A-218ENST00000600383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.08
HIF3A-218ENST00000600383 SCAPERQ9BY12 1400 aa21.8■■□□□ 1.08
HIF3A-218ENST00000600383 ANKRD30BQ9BXX2 1392 aa21.79■■□□□ 1.08
HIF3A-218ENST00000600383 ADGRL1O94910 1474 aa21.79■■□□□ 1.08
HIF3A-218ENST00000600383 PLXNC1O60486 1568 aa21.73■■□□□ 1.07
HIF3A-218ENST00000600383 DUOX2Q9NRD8 1548 aa21.71■■□□□ 1.07
HIF3A-218ENST00000600383 L3MBTL2Q969R5 705 aa21.71■■□□□ 1.07
HIF3A-218ENST00000600383 RTEL1-TNFRSF6BF6WH68 1400 aa21.7■■□□□ 1.06
HIF3A-218ENST00000600383 FAM69CQ0P6D2 419 aa21.67■■□□□ 1.06
HIF3A-218ENST00000600383 RPRD2Q5VT52 1461 aaKnown RBP21.67■■□□□ 1.06
HIF3A-218ENST00000600383 ERBINQ96RT1 1412 aa21.66■■□□□ 1.06
HIF3A-218ENST00000600383 ZFYVE16Q7Z3T8 1539 aa21.66■■□□□ 1.06
HIF3A-218ENST00000600383 KDM5DQ9BY66 1539 aa21.66■■□□□ 1.06
HIF3A-218ENST00000600383 FAM135AQ9P2D6 1515 aa21.65■■□□□ 1.06
HIF3A-218ENST00000600383 HIRIP3Q9BW71 556 aaPredicted RBP21.65■■□□□ 1.06
HIF3A-218ENST00000600383 ATP7AQ04656 1500 aa21.64■■□□□ 1.05
HIF3A-218ENST00000600383 RAPGEF3O95398 923 aa21.62■■□□□ 1.05
HIF3A-218ENST00000600383 ZNF518AQ6AHZ1 1483 aa21.62■■□□□ 1.05
HIF3A-218ENST00000600383 KIF3BO15066 747 aa21.61■■□□□ 1.05
HIF3A-218ENST00000600383 CFAP74Q9C0B2 1584 aa21.6■■□□□ 1.05
HIF3A-218ENST00000600383 UNC13BO14795 1591 aa21.59■■□□□ 1.05
HIF3A-218ENST00000600383 INO80Q9ULG1 1556 aaPredicted RBP21.59■■□□□ 1.05
HIF3A-218ENST00000600383 POGZQ7Z3K3 1410 aa21.57■■□□□ 1.04
HIF3A-218ENST00000600383 NEO1Q92859 1461 aa21.57■■□□□ 1.04
HIF3A-218ENST00000600383 DHX29Q7Z478 1369 aaKnown RBP21.56■■□□□ 1.04
HIF3A-218ENST00000600383 MAP3K4Q9Y6R4 1608 aa21.55■■□□□ 1.04
HIF3A-218ENST00000600383 TEX14Q8IWB6 1497 aa21.54■■□□□ 1.04
HIF3A-218ENST00000600383 NBPF8Q3BBV2 869 aa21.53■■□□□ 1.04
HIF3A-218ENST00000600383 ZNF326Q5BKZ1 582 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms