RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CARMIL2Q6F5E8 1435 aa16.14■□□□□ 0.17
ARHGEF1-220ENST00000600274 HNRNPMP52272 730 aaKnown RBP eCLIP16.13■□□□□ 0.17
ARHGEF1-220ENST00000600274 EIF4G2P78344 907 aaKnown RBP eCLIP16.13■□□□□ 0.174e-7■■■■□ 20.1
ARHGEF1-220ENST00000600274 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
ARHGEF1-220ENST00000600274 SENP3-EIF4A1A0A087X0R7 540 aa16.12■□□□□ 0.17
ARHGEF1-220ENST00000600274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.171e-6■■□□□ 14.4
ARHGEF1-220ENST00000600274 SUPT16HQ9Y5B9 1047 aaKnown RBP16.1■□□□□ 0.17
ARHGEF1-220ENST00000600274 KDM6BO15054 1643 aa16.1■□□□□ 0.17
ARHGEF1-220ENST00000600274 TSPY4P0CV99 314 aa16.1■□□□□ 0.17
ARHGEF1-220ENST00000600274 TSPY10P0CW01 314 aa16.1■□□□□ 0.17
ARHGEF1-220ENST00000600274 KIAA0556O60303 1618 aa16.1■□□□□ 0.17
ARHGEF1-220ENST00000600274 PKD2Q13563 968 aa16.1■□□□□ 0.17
ARHGEF1-220ENST00000600274 DAPK1P53355 1430 aa16.09■□□□□ 0.17
ARHGEF1-220ENST00000600274 SYNJ2O15056 1496 aa16.09■□□□□ 0.17
ARHGEF1-220ENST00000600274 FKBP8Q14318 412 aa16.09■□□□□ 0.17
ARHGEF1-220ENST00000600274 ABCC5O15440 1437 aa16.08■□□□□ 0.17
ARHGEF1-220ENST00000600274 MIA2Q96PC5 1412 aa16.08■□□□□ 0.16
ARHGEF1-220ENST00000600274 HNRNPUQ00839 825 aaKnown RBP eCLIP16.07■□□□□ 0.16
ARHGEF1-220ENST00000600274 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
ARHGEF1-220ENST00000600274 TROQ12816 1431 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF1-220ENST00000600274 MAGI1Q96QZ7 1491 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF1-220ENST00000600274 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
ARHGEF1-220ENST00000600274 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
ARHGEF1-220ENST00000600274 WASHC2AQ641Q2 1341 aa16.04■□□□□ 0.16
ARHGEF1-220ENST00000600274 NEFLP07196 543 aa16.04■□□□□ 0.16
ARHGEF1-220ENST00000600274 RAPGEF6Q8TEU7 1601 aa16.04■□□□□ 0.16
ARHGEF1-220ENST00000600274 MYT1LQ9UL68 1186 aa16.04■□□□□ 0.16
ARHGEF1-220ENST00000600274 ARHGEF11O15085 1522 aa16.03■□□□□ 0.16
ARHGEF1-220ENST00000600274 PTPRGP23470 1445 aa16.03■□□□□ 0.16
ARHGEF1-220ENST00000600274 TCOF1Q13428 1488 aaKnown RBP16.03■□□□□ 0.16
ARHGEF1-220ENST00000600274 C11orf95C9JLR9 678 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF1-220ENST00000600274 IRX6P78412 446 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF1-220ENST00000600274 RGL3Q3MIN7 710 aa16.02■□□□□ 0.15
ARHGEF1-220ENST00000600274 NUP155O75694 1391 aa16.01■□□□□ 0.15
ARHGEF1-220ENST00000600274 CAMSAP2Q08AD1 1489 aa16■□□□□ 0.15
ARHGEF1-220ENST00000600274 GPATCH8Q9UKJ3 1502 aaKnown RBP15.98■□□□□ 0.15
ARHGEF1-220ENST00000600274 ANKRD30AQ9BXX3 1397 aa15.98■□□□□ 0.15
ARHGEF1-220ENST00000600274 DENND4BO75064 1496 aaPredicted RBP15.98■□□□□ 0.15
ARHGEF1-220ENST00000600274 BCL11AQ9H165 835 aa15.97■□□□□ 0.15
ARHGEF1-220ENST00000600274 CCDC184Q52MB2 194 aa15.97■□□□□ 0.15
ARHGEF1-220ENST00000600274 KIF14Q15058 1648 aa15.97■□□□□ 0.15
ARHGEF1-220ENST00000600274 MRS2Q9HD23 443 aa15.96■□□□□ 0.14
ARHGEF1-220ENST00000600274 ANKRD30BQ9BXX2 1392 aa15.95■□□□□ 0.14
ARHGEF1-220ENST00000600274 CCER2I3L3R5 266 aa15.95■□□□□ 0.14
ARHGEF1-220ENST00000600274 DCAF11Q8TEB1 546 aa15.95■□□□□ 0.14
ARHGEF1-220ENST00000600274 ATP10BO94823 1461 aa15.94■□□□□ 0.14
ARHGEF1-220ENST00000600274 NCOA1Q15788 1441 aa15.94■□□□□ 0.14
ARHGEF1-220ENST00000600274 AKNAQ7Z591 1439 aa15.94■□□□□ 0.14
ARHGEF1-220ENST00000600274 ANKRD50Q9ULJ7 1429 aa15.93■□□□□ 0.14
ARHGEF1-220ENST00000600274 NUP160Q12769 1436 aa15.92■□□□□ 0.14
ARHGEF1-220ENST00000600274 ROCK1Q13464 1354 aa15.92■□□□□ 0.14
ARHGEF1-220ENST00000600274 CARD11Q9BXL7 1154 aa15.91■□□□□ 0.14
ARHGEF1-220ENST00000600274 KIF15Q9NS87 1388 aa15.9■□□□□ 0.14
ARHGEF1-220ENST00000600274 C9orf84Q5VXU9 1444 aa15.89■□□□□ 0.13
ARHGEF1-220ENST00000600274 KIF7Q2M1P5 1343 aa15.88■□□□□ 0.13
ARHGEF1-220ENST00000600274 DNMT1P26358 1616 aaKnown RBP15.87■□□□□ 0.13
ARHGEF1-220ENST00000600274 GCC2Q8IWJ2 1684 aa15.87■□□□□ 0.13
ARHGEF1-220ENST00000600274 CCDC7Q96M83 1385 aa15.86■□□□□ 0.13
ARHGEF1-220ENST00000600274 RPRD2Q5VT52 1461 aaKnown RBP15.85■□□□□ 0.13
ARHGEF1-220ENST00000600274 KDM5BQ9UGL1 1544 aa15.85■□□□□ 0.13
ARHGEF1-220ENST00000600274 PRKRIP1Q9H875 184 aaPredicted RBP15.84■□□□□ 0.13
ARHGEF1-220ENST00000600274 PZPP20742 1482 aa15.84■□□□□ 0.13
ARHGEF1-220ENST00000600274 SALL2Q9Y467 1007 aaPredicted RBP15.83■□□□□ 0.13
ARHGEF1-220ENST00000600274 KIAA1107Q9UPP5 1409 aa15.83■□□□□ 0.12
ARHGEF1-220ENST00000600274 USP47Q96K76 1375 aa15.83■□□□□ 0.12
ARHGEF1-220ENST00000600274 ST20-MTHFSA0A0A6YYL1 179 aa15.82■□□□□ 0.12
ARHGEF1-220ENST00000600274 TSHZ2Q9NRE2 1034 aa15.8■□□□□ 0.12
ARHGEF1-220ENST00000600274 CNTLNQ9NXG0 1405 aa15.79■□□□□ 0.12
ARHGEF1-220ENST00000600274 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
ARHGEF1-220ENST00000600274 AFAP1Q8N556 730 aa15.78■□□□□ 0.12
ARHGEF1-220ENST00000600274 ERICH6Q7L0X2 663 aa15.77■□□□□ 0.12
ARHGEF1-220ENST00000600274 TEX14Q8IWB6 1497 aa15.77■□□□□ 0.12
ARHGEF1-220ENST00000600274 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.11
ARHGEF1-220ENST00000600274 ERCC6L2Q5T890 1561 aa15.77■□□□□ 0.11
ARHGEF1-220ENST00000600274 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
ARHGEF1-220ENST00000600274 ABCA8O94911 1581 aa15.75■□□□□ 0.11
ARHGEF1-220ENST00000600274 NBPF1Q3BBV0 1214 aa15.75■□□□□ 0.11
ARHGEF1-220ENST00000600274 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
ARHGEF1-220ENST00000600274 ROCK2O75116 1388 aaKnown RBP15.74■□□□□ 0.11
ARHGEF1-220ENST00000600274 EFCAB2Q5VUJ9 269 aa15.74■□□□□ 0.11
ARHGEF1-220ENST00000600274 ABCC10Q5T3U5 1492 aa15.74■□□□□ 0.11
ARHGEF1-220ENST00000600274 ANP32EQ9BTT0 268 aa15.71■□□□□ 0.1
ARHGEF1-220ENST00000600274 SYCP2Q9BX26 1530 aa15.71■□□□□ 0.1
ARHGEF1-220ENST00000600274 CCDC144AA2RUR9 1427 aa15.7■□□□□ 0.1
ARHGEF1-220ENST00000600274 CCDC141Q6ZP82 1450 aa15.7■□□□□ 0.1
ARHGEF1-220ENST00000600274 CHD1O14646 1710 aa15.69■□□□□ 0.1
ARHGEF1-220ENST00000600274 CDC42BPAQ5VT25 1732 aa15.69■□□□□ 0.1
ARHGEF1-220ENST00000600274 CHGAP10645 457 aaKnown RBP15.69■□□□□ 0.1
ARHGEF1-220ENST00000600274 CC2D1BQ5T0F9 858 aaKnown RBP15.68■□□□□ 0.1
ARHGEF1-220ENST00000600274 ADGRL2O95490 1459 aa15.68■□□□□ 0.1
ARHGEF1-220ENST00000600274 PLEKHH2Q8IVE3 1493 aa15.68■□□□□ 0.1
ARHGEF1-220ENST00000600274 RSPH4AQ5TD94 716 aa15.68■□□□□ 0.1
ARHGEF1-220ENST00000600274 SPAG9O60271 1321 aaKnown RBP15.68■□□□□ 0.1
ARHGEF1-220ENST00000600274 MBD5Q9P267 1494 aa15.66■□□□□ 0.1
ARHGEF1-220ENST00000600274 KIF3BO15066 747 aa15.65■□□□□ 0.1
ARHGEF1-220ENST00000600274 SPATA31E1Q6ZUB1 1445 aa15.64■□□□□ 0.09
ARHGEF1-220ENST00000600274 ADGBQ8N7X0 1667 aa15.64■□□□□ 0.09
ARHGEF1-220ENST00000600274 B4GALNT3Q6L9W6 998 aa15.64■□□□□ 0.09
ARHGEF1-220ENST00000600274 SAMD9LQ8IVG5 1584 aa15.63■□□□□ 0.09
ARHGEF1-220ENST00000600274 TTC37Q6PGP7 1564 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms