RNA–Protein interactions for RNA: ENST00000599872.1

SMIM7-218, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 621 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-218ENST00000599872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.46□□□□□ -0.41
SMIM7-218ENST00000599872 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
SMIM7-218ENST00000599872 P3H3Q8IVL6 736 aa12.46□□□□□ -0.41
SMIM7-218ENST00000599872 MED1Q15648 1581 aaPredicted RBP12.45□□□□□ -0.42
SMIM7-218ENST00000599872 ARHGEF12Q9NZN5 1544 aa12.44□□□□□ -0.42
SMIM7-218ENST00000599872 EFCAB5A4FU69 1503 aa12.43□□□□□ -0.42
SMIM7-218ENST00000599872 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
SMIM7-218ENST00000599872 CTTNBP2Q8WZ74 1663 aa12.42□□□□□ -0.42
SMIM7-218ENST00000599872 ZNF335Q9H4Z2 1342 aaPredicted RBP12.41□□□□□ -0.42
SMIM7-218ENST00000599872 HSPA1LP34931 641 aa12.41□□□□□ -0.42
SMIM7-218ENST00000599872 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
SMIM7-218ENST00000599872 SETD1BQ9UPS6 1966 aaKnown RBP12.39□□□□□ -0.43
SMIM7-218ENST00000599872 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
SMIM7-218ENST00000599872 FAM9AQ8IZU1 332 aaPredicted RBP12.38□□□□□ -0.43
SMIM7-218ENST00000599872 MAGI2Q86UL8 1455 aa12.38□□□□□ -0.43
SMIM7-218ENST00000599872 NCOA1Q15788 1441 aa12.37□□□□□ -0.43
SMIM7-218ENST00000599872 PIP4K2BP78356 416 aa12.37□□□□□ -0.43
SMIM7-218ENST00000599872 ATP10AO60312 1499 aa12.36□□□□□ -0.43
SMIM7-218ENST00000599872 C9orf84Q5VXU9 1444 aa12.36□□□□□ -0.43
SMIM7-218ENST00000599872 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
SMIM7-218ENST00000599872 SCAPERQ9BY12 1400 aa12.34□□□□□ -0.43
SMIM7-218ENST00000599872 CFAP74Q9C0B2 1584 aa12.34□□□□□ -0.43
SMIM7-218ENST00000599872 RAPGEF6Q8TEU7 1601 aa12.33□□□□□ -0.44
SMIM7-218ENST00000599872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMIM7-218ENST00000599872 PLEKHD1A6NEE1 506 aa12.31□□□□□ -0.44
SMIM7-218ENST00000599872 PIAS4Q8N2W9 510 aaPredicted RBP12.31□□□□□ -0.44
SMIM7-218ENST00000599872 C3P01024 1663 aa12.31□□□□□ -0.44
SMIM7-218ENST00000599872 CAMSAP1Q5T5Y3 1602 aa12.3□□□□□ -0.44
SMIM7-218ENST00000599872 TRAPPC8Q9Y2L5 1435 aa12.3□□□□□ -0.44
SMIM7-218ENST00000599872 NUP153P49790 1475 aaKnown RBP12.3□□□□□ -0.44
SMIM7-218ENST00000599872 PPP6R1Q9UPN7 881 aa12.28□□□□□ -0.44
SMIM7-218ENST00000599872 ESF1Q9H501 851 aaKnown RBP12.27□□□□□ -0.45
SMIM7-218ENST00000599872 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
SMIM7-218ENST00000599872 TOM1O60784 492 aa12.25□□□□□ -0.45
SMIM7-218ENST00000599872 ADRA2BP18089 450 aa12.25□□□□□ -0.45
SMIM7-218ENST00000599872 AFAP1Q8N556 730 aa12.24□□□□□ -0.45
SMIM7-218ENST00000599872 RGS17Q9UGC6 210 aaPredicted RBP12.24□□□□□ -0.45
SMIM7-218ENST00000599872 RANGAP1P46060 587 aaPredicted RBP12.23□□□□□ -0.45
SMIM7-218ENST00000599872 PLCH2O75038 1416 aa12.22□□□□□ -0.45
SMIM7-218ENST00000599872 SAMD9Q5K651 1589 aa12.21□□□□□ -0.46
SMIM7-218ENST00000599872 PRXQ9BXM0 1461 aa12.21□□□□□ -0.46
SMIM7-218ENST00000599872 PKD2Q13563 968 aa12.2□□□□□ -0.46
SMIM7-218ENST00000599872 EFCAB2Q5VUJ9 269 aa12.2□□□□□ -0.46
SMIM7-218ENST00000599872 DIP2CQ9Y2E4 1556 aa12.2□□□□□ -0.46
SMIM7-218ENST00000599872 SRCAPQ6ZRS2 3230 aa12.19□□□□□ -0.46
SMIM7-218ENST00000599872 ZNF518AQ6AHZ1 1483 aa12.18□□□□□ -0.46
SMIM7-218ENST00000599872 TCOF1Q13428 1488 aaKnown RBP12.17□□□□□ -0.46
SMIM7-218ENST00000599872 ABCA6Q8N139 1617 aa12.16□□□□□ -0.46
SMIM7-218ENST00000599872 NPATQ14207 1427 aa12.16□□□□□ -0.46
SMIM7-218ENST00000599872 KDM5CP41229 1560 aa12.16□□□□□ -0.46
SMIM7-218ENST00000599872 AGLP35573 1532 aa12.16□□□□□ -0.46
SMIM7-218ENST00000599872 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
SMIM7-218ENST00000599872 PLA2R1Q13018 1463 aa12.15□□□□□ -0.46
SMIM7-218ENST00000599872 REREQ9P2R6 1566 aa12.15□□□□□ -0.46
SMIM7-218ENST00000599872 CNTLNQ9NXG0 1405 aa12.15□□□□□ -0.46
SMIM7-218ENST00000599872 POTEAQ6S8J7 498 aa12.15□□□□□ -0.46
SMIM7-218ENST00000599872 ZMYM3Q14202 1370 aa12.15□□□□□ -0.46
SMIM7-218ENST00000599872 ALKQ9UM73 1620 aa12.15□□□□□ -0.47
SMIM7-218ENST00000599872 SUPT6HQ7KZ85 1726 aaKnown RBP12.13□□□□□ -0.47
SMIM7-218ENST00000599872 CPS1P31327 1500 aa12.12□□□□□ -0.47
SMIM7-218ENST00000599872 SHANK2Q9UPX8 1470 aa12.12□□□□□ -0.47
SMIM7-218ENST00000599872 PTPRKQ15262 1439 aa12.11□□□□□ -0.47
SMIM7-218ENST00000599872 MYO3AQ8NEV4 1616 aa12.11□□□□□ -0.47
SMIM7-218ENST00000599872 CEP170BQ9Y4F5 1589 aaPredicted RBP12.11□□□□□ -0.47
SMIM7-218ENST00000599872 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
SMIM7-218ENST00000599872 ZNF142P52746 1687 aaPredicted RBP12.1□□□□□ -0.47
SMIM7-218ENST00000599872 MLH3Q9UHC1 1453 aa12.1□□□□□ -0.47
SMIM7-218ENST00000599872 ARHGAP5Q13017 1502 aa12.1□□□□□ -0.47
SMIM7-218ENST00000599872 MROH2AA6NES4 1674 aa12.08□□□□□ -0.48
SMIM7-218ENST00000599872 SETD1AO15047 1707 aaKnown RBP12.08□□□□□ -0.48
SMIM7-218ENST00000599872 ATP1B4Q9UN42 357 aaPredicted RBP12.07□□□□□ -0.48
SMIM7-218ENST00000599872 KIF14Q15058 1648 aa12.06□□□□□ -0.48
SMIM7-218ENST00000599872 CLTCQ00610 1675 aaKnown RBP12.05□□□□□ -0.48
SMIM7-218ENST00000599872 NEURL4Q96JN8 1562 aa12.05□□□□□ -0.48
SMIM7-218ENST00000599872 KIDINS220Q9ULH0 1771 aa12.04□□□□□ -0.48
SMIM7-218ENST00000599872 VWDEQ8N2E2 1590 aa12.04□□□□□ -0.48
SMIM7-218ENST00000599872 DNMT1P26358 1616 aaKnown RBP12.03□□□□□ -0.48
SMIM7-218ENST00000599872 A2ML1A8K2U0 1454 aa12.02□□□□□ -0.48
SMIM7-218ENST00000599872 POLR1AO95602 1720 aaPredicted RBP12.01□□□□□ -0.49
SMIM7-218ENST00000599872 GGT6Q6P531 493 aa12.01□□□□□ -0.49
SMIM7-218ENST00000599872 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.496e-8■■□□□ 13.4
SMIM7-218ENST00000599872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMIM7-218ENST00000599872 ABCC1P33527 1531 aa11.99□□□□□ -0.49
SMIM7-218ENST00000599872 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
SMIM7-218ENST00000599872 CDC42BPBQ9Y5S2 1711 aa11.99□□□□□ -0.49
SMIM7-218ENST00000599872 ANKLE2Q86XL3 938 aa11.98□□□□□ -0.49
SMIM7-218ENST00000599872 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
SMIM7-218ENST00000599872 CDK11AQ9UQ88 783 aaPredicted RBP11.98□□□□□ -0.49
SMIM7-218ENST00000599872 ITSN2Q9NZM3 1697 aa11.97□□□□□ -0.49
SMIM7-218ENST00000599872 TROQ12816 1431 aaPredicted RBP11.97□□□□□ -0.49
SMIM7-218ENST00000599872 FBXO31Q5XUX0 539 aaPredicted RBP11.97□□□□□ -0.49
SMIM7-218ENST00000599872 STRCP1A6NGW2 1772 aa11.97□□□□□ -0.49
SMIM7-218ENST00000599872 RNF17Q9BXT8 1623 aaKnown RBP11.97□□□□□ -0.49
SMIM7-218ENST00000599872 NPHP4O75161 1426 aaPredicted RBP11.96□□□□□ -0.49
SMIM7-218ENST00000599872 SAMD9LQ8IVG5 1584 aa11.95□□□□□ -0.5
SMIM7-218ENST00000599872 SPAG9O60271 1321 aaKnown RBP11.94□□□□□ -0.5
SMIM7-218ENST00000599872 ZNF777Q9ULD5 760 aaPredicted RBP11.94□□□□□ -0.5
SMIM7-218ENST00000599872 CLIP1P30622 1438 aa11.94□□□□□ -0.5
SMIM7-218ENST00000599872 TNRQ92752 1358 aa11.93□□□□□ -0.5
SMIM7-218ENST00000599872 HNRNPMP52272 730 aaKnown RBP eCLIP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms