RNA–Protein interactions for RNA: ENST00000598362.1

GRAMD1A-208, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-208ENST00000598362 ABCA9Q8IUA7 1624 aa11.99□□□□□ -0.49
GRAMD1A-208ENST00000598362 KIF14Q15058 1648 aa11.97□□□□□ -0.49
GRAMD1A-208ENST00000598362 TROQ12816 1431 aaPredicted RBP11.96□□□□□ -0.49
GRAMD1A-208ENST00000598362 TTC37Q6PGP7 1564 aa11.96□□□□□ -0.5
GRAMD1A-208ENST00000598362 DENND4BO75064 1496 aaPredicted RBP11.95□□□□□ -0.5
GRAMD1A-208ENST00000598362 TIAM1Q13009 1591 aa11.95□□□□□ -0.5
GRAMD1A-208ENST00000598362 EHBP1L1Q8N3D4 1523 aa11.95□□□□□ -0.5
GRAMD1A-208ENST00000598362 FANCAO15360 1455 aa11.95□□□□□ -0.5
GRAMD1A-208ENST00000598362 AKNAQ7Z591 1439 aa11.94□□□□□ -0.5
GRAMD1A-208ENST00000598362 RIMS1Q86UR5 1692 aaKnown RBP11.94□□□□□ -0.5
GRAMD1A-208ENST00000598362 PLEKHD1A6NEE1 506 aa11.94□□□□□ -0.5
GRAMD1A-208ENST00000598362 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.94□□□□□ -0.5
GRAMD1A-208ENST00000598362 YEATS2Q9ULM3 1422 aa11.93□□□□□ -0.5
GRAMD1A-208ENST00000598362 MLECQ14165 292 aa11.92□□□□□ -0.5
GRAMD1A-208ENST00000598362 CDK11AQ9UQ88 783 aaPredicted RBP11.92□□□□□ -0.5
GRAMD1A-208ENST00000598362 FRMPD1Q5SYB0 1578 aa11.91□□□□□ -0.5
GRAMD1A-208ENST00000598362 MAP3K1Q13233 1512 aa11.91□□□□□ -0.5
GRAMD1A-208ENST00000598362 MAGI2Q86UL8 1455 aa11.9□□□□□ -0.5
GRAMD1A-208ENST00000598362 ARHGEF40Q8TER5 1519 aa11.9□□□□□ -0.5
GRAMD1A-208ENST00000598362 MTUS2Q5JR59 1369 aa11.89□□□□□ -0.51
GRAMD1A-208ENST00000598362 MYO5CQ9NQX4 1742 aa11.89□□□□□ -0.51
GRAMD1A-208ENST00000598362 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
GRAMD1A-208ENST00000598362 LRRC9Q6ZRR7 1453 aa11.87□□□□□ -0.51
GRAMD1A-208ENST00000598362 CFAP74Q9C0B2 1584 aa11.87□□□□□ -0.51
GRAMD1A-208ENST00000598362 SUPT6HQ7KZ85 1726 aaKnown RBP11.86□□□□□ -0.51
GRAMD1A-208ENST00000598362 CEBPAP49715 358 aaPredicted RBP11.85□□□□□ -0.51
GRAMD1A-208ENST00000598362 RICTORQ6R327 1708 aa11.85□□□□□ -0.51
GRAMD1A-208ENST00000598362 ZFYVE16Q7Z3T8 1539 aa11.85□□□□□ -0.51
GRAMD1A-208ENST00000598362 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
GRAMD1A-208ENST00000598362 CDC42BPAQ5VT25 1732 aa11.84□□□□□ -0.51
GRAMD1A-208ENST00000598362 ZMYM4Q5VZL5 1548 aa11.84□□□□□ -0.51
GRAMD1A-208ENST00000598362 PTPRTO14522 1441 aa11.84□□□□□ -0.51
GRAMD1A-208ENST00000598362 PLCH2O75038 1416 aa11.84□□□□□ -0.51
GRAMD1A-208ENST00000598362 NCOA2Q15596 1464 aa11.83□□□□□ -0.52
GRAMD1A-208ENST00000598362 ARHGAP5Q13017 1502 aa11.83□□□□□ -0.52
GRAMD1A-208ENST00000598362 ITSN2Q9NZM3 1697 aa11.83□□□□□ -0.52
GRAMD1A-208ENST00000598362 ATP10AO60312 1499 aa11.83□□□□□ -0.52
GRAMD1A-208ENST00000598362 SETD1BQ9UPS6 1966 aaKnown RBP11.82□□□□□ -0.52
GRAMD1A-208ENST00000598362 UHRF1BP1Q6BDS2 1440 aa11.82□□□□□ -0.52
GRAMD1A-208ENST00000598362 CDC42BPBQ9Y5S2 1711 aa11.82□□□□□ -0.52
GRAMD1A-208ENST00000598362 PREX1Q8TCU6 1659 aa11.81□□□□□ -0.52
GRAMD1A-208ENST00000598362 SCAPERQ9BY12 1400 aa11.81□□□□□ -0.52
GRAMD1A-208ENST00000598362 APLP2Q06481 763 aa11.81□□□□□ -0.52
GRAMD1A-208ENST00000598362 FER1L4A9Z1Z3 1794 aa11.81□□□□□ -0.52
GRAMD1A-208ENST00000598362 GPATCH8Q9UKJ3 1502 aaKnown RBP11.81□□□□□ -0.52
GRAMD1A-208ENST00000598362 EFCAB2Q5VUJ9 269 aa11.8□□□□□ -0.52
GRAMD1A-208ENST00000598362 IQSEC2Q5JU85 1478 aa11.8□□□□□ -0.52
GRAMD1A-208ENST00000598362 ABCC1P33527 1531 aa11.8□□□□□ -0.52
GRAMD1A-208ENST00000598362 ARHGEF12Q9NZN5 1544 aa11.8□□□□□ -0.52
GRAMD1A-208ENST00000598362 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
GRAMD1A-208ENST00000598362 KANK4Q5T7N3 995 aaPredicted RBP11.79□□□□□ -0.52
GRAMD1A-208ENST00000598362 ESF1Q9H501 851 aaKnown RBP11.79□□□□□ -0.52
GRAMD1A-208ENST00000598362 STRCQ7RTU9 1775 aa11.79□□□□□ -0.52
GRAMD1A-208ENST00000598362 C9orf84Q5VXU9 1444 aa11.78□□□□□ -0.52
GRAMD1A-208ENST00000598362 SAMD9LQ8IVG5 1584 aa11.78□□□□□ -0.52
GRAMD1A-208ENST00000598362 SIGLEC1Q9BZZ2 1709 aa11.76□□□□□ -0.53
GRAMD1A-208ENST00000598362 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
GRAMD1A-208ENST00000598362 SYCP2Q9BX26 1530 aa11.75□□□□□ -0.53
GRAMD1A-208ENST00000598362 UBAP1LF5GYI3 381 aa11.74□□□□□ -0.53
GRAMD1A-208ENST00000598362 MYOM3Q5VTT5 1437 aa11.74□□□□□ -0.53
GRAMD1A-208ENST00000598362 TRAPPC8Q9Y2L5 1435 aa11.74□□□□□ -0.53
GRAMD1A-208ENST00000598362 LTBP4Q8N2S1 1624 aa11.74□□□□□ -0.53
GRAMD1A-208ENST00000598362 CAMSAP2Q08AD1 1489 aa11.73□□□□□ -0.53
GRAMD1A-208ENST00000598362 KDM5CP41229 1560 aa11.72□□□□□ -0.53
GRAMD1A-208ENST00000598362 PLEKHH2Q8IVE3 1493 aa11.72□□□□□ -0.53
GRAMD1A-208ENST00000598362 AFAP1Q8N556 730 aa11.72□□□□□ -0.53
GRAMD1A-208ENST00000598362 ZNF518AQ6AHZ1 1483 aa11.71□□□□□ -0.53
GRAMD1A-208ENST00000598362 CFDP1Q9UEE9 299 aaPredicted RBP11.71□□□□□ -0.53
GRAMD1A-208ENST00000598362 MIA2Q96PC5 1412 aa11.7□□□□□ -0.54
GRAMD1A-208ENST00000598362 KIAA1107Q9UPP5 1409 aa11.69□□□□□ -0.54
GRAMD1A-208ENST00000598362 PTPN23Q9H3S7 1636 aa11.69□□□□□ -0.54
GRAMD1A-208ENST00000598362 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
GRAMD1A-208ENST00000598362 NCOA1Q15788 1441 aa11.69□□□□□ -0.54
GRAMD1A-208ENST00000598362 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
GRAMD1A-208ENST00000598362 PKD2Q13563 968 aa11.67□□□□□ -0.54
GRAMD1A-208ENST00000598362 TCOF1Q13428 1488 aaKnown RBP11.67□□□□□ -0.54
GRAMD1A-208ENST00000598362 CCDC141Q6ZP82 1450 aa11.67□□□□□ -0.54
GRAMD1A-208ENST00000598362 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
GRAMD1A-208ENST00000598362 CNTLNQ9NXG0 1405 aa11.67□□□□□ -0.54
GRAMD1A-208ENST00000598362 ARHGEF5Q12774 1597 aa11.67□□□□□ -0.54
GRAMD1A-208ENST00000598362 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
GRAMD1A-208ENST00000598362 ZNF335Q9H4Z2 1342 aaPredicted RBP11.65□□□□□ -0.54
GRAMD1A-208ENST00000598362 ZNF644Q9H582 1327 aaPredicted RBP11.65□□□□□ -0.54
GRAMD1A-208ENST00000598362 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
GRAMD1A-208ENST00000598362 ABCA6Q8N139 1617 aa11.65□□□□□ -0.54
GRAMD1A-208ENST00000598362 AGLP35573 1532 aa11.65□□□□□ -0.55
GRAMD1A-208ENST00000598362 MLH3Q9UHC1 1453 aa11.64□□□□□ -0.55
GRAMD1A-208ENST00000598362 REREQ9P2R6 1566 aa11.64□□□□□ -0.55
GRAMD1A-208ENST00000598362 DIP2CQ9Y2E4 1556 aa11.64□□□□□ -0.55
GRAMD1A-208ENST00000598362 TOM1O60784 492 aa11.64□□□□□ -0.55
GRAMD1A-208ENST00000598362 PPARGC1BQ86YN6 1023 aaKnown RBP11.64□□□□□ -0.55
GRAMD1A-208ENST00000598362 CROCC2H7BZ55 1655 aa11.64□□□□□ -0.55
GRAMD1A-208ENST00000598362 ATP7AQ04656 1500 aa11.64□□□□□ -0.55
GRAMD1A-208ENST00000598362 NPATQ14207 1427 aa11.63□□□□□ -0.55
GRAMD1A-208ENST00000598362 C3P01024 1663 aa11.63□□□□□ -0.55
GRAMD1A-208ENST00000598362 KIDINS220Q9ULH0 1771 aa11.63□□□□□ -0.55
GRAMD1A-208ENST00000598362 DNMT1P26358 1616 aaKnown RBP11.63□□□□□ -0.55
GRAMD1A-208ENST00000598362 HNRNPMP52272 730 aaKnown RBP eCLIP11.62□□□□□ -0.55
GRAMD1A-208ENST00000598362 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
GRAMD1A-208ENST00000598362 MAST1Q9Y2H9 1570 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms