RNA–Protein interactions for RNA: ENST00000598178.1

LTBP4-221, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-221ENST00000598178 PREX1Q8TCU6 1659 aa20.52■□□□□ 0.88
LTBP4-221ENST00000598178 ARHGEF12Q9NZN5 1544 aa20.52■□□□□ 0.87
LTBP4-221ENST00000598178 EHMT2Q96KQ7 1210 aa20.51■□□□□ 0.87
LTBP4-221ENST00000598178 FMN1Q68DA7 1419 aa20.5■□□□□ 0.87
LTBP4-221ENST00000598178 PLCH2O75038 1416 aa20.48■□□□□ 0.87
LTBP4-221ENST00000598178 ATP10AO60312 1499 aa20.48■□□□□ 0.87
LTBP4-221ENST00000598178 SETD1BQ9UPS6 1966 aaKnown RBP20.46■□□□□ 0.87
LTBP4-221ENST00000598178 SCAPERQ9BY12 1400 aa20.46■□□□□ 0.87
LTBP4-221ENST00000598178 DMRT2Q9Y5R5 561 aa20.46■□□□□ 0.87
LTBP4-221ENST00000598178 STRCQ7RTU9 1775 aa20.45■□□□□ 0.86
LTBP4-221ENST00000598178 C9orf84Q5VXU9 1444 aa20.44■□□□□ 0.86
LTBP4-221ENST00000598178 PLPPR3Q6T4P5 718 aa20.44■□□□□ 0.86
LTBP4-221ENST00000598178 ARHGAP35Q9NRY4 1499 aa20.43■□□□□ 0.86
LTBP4-221ENST00000598178 MLECQ14165 292 aa20.43■□□□□ 0.86
LTBP4-221ENST00000598178 SOCS7O14512 581 aa20.41■□□□□ 0.86
LTBP4-221ENST00000598178 CDK13Q14004 1512 aaKnown RBP20.4■□□□□ 0.86
LTBP4-221ENST00000598178 MYO5CQ9NQX4 1742 aa20.39■□□□□ 0.86
LTBP4-221ENST00000598178 DISP3Q9P2K9 1392 aa20.39■□□□□ 0.85
LTBP4-221ENST00000598178 ILDR2Q71H61 639 aa20.38■□□□□ 0.85
LTBP4-221ENST00000598178 ZNF518AQ6AHZ1 1483 aa20.37■□□□□ 0.85
LTBP4-221ENST00000598178 EFCAB2Q5VUJ9 269 aa20.37■□□□□ 0.85
LTBP4-221ENST00000598178 ATP1B4Q9UN42 357 aaPredicted RBP20.37■□□□□ 0.85
LTBP4-221ENST00000598178 UHRF1BP1Q6BDS2 1440 aa20.36■□□□□ 0.85
LTBP4-221ENST00000598178 CDK11AQ9UQ88 783 aaPredicted RBP20.36■□□□□ 0.85
LTBP4-221ENST00000598178 KDM5CP41229 1560 aa20.36■□□□□ 0.85
LTBP4-221ENST00000598178 REREQ9P2R6 1566 aa20.36■□□□□ 0.85
LTBP4-221ENST00000598178 PTPRTO14522 1441 aa20.35■□□□□ 0.85
LTBP4-221ENST00000598178 CEBPAP49715 358 aaPredicted RBP20.34■□□□□ 0.85
LTBP4-221ENST00000598178 KIF14Q15058 1648 aa20.31■□□□□ 0.84
LTBP4-221ENST00000598178 CLIP1P30622 1438 aa20.31■□□□□ 0.84
LTBP4-221ENST00000598178 IQSEC2Q5JU85 1478 aa20.3■□□□□ 0.84
LTBP4-221ENST00000598178 CCDC18Q5T9S5 1454 aa20.29■□□□□ 0.84
LTBP4-221ENST00000598178 DIP2CQ9Y2E4 1556 aa20.29■□□□□ 0.84
LTBP4-221ENST00000598178 C3P01024 1663 aa20.29■□□□□ 0.84
LTBP4-221ENST00000598178 SPATA31D1Q6ZQQ2 1576 aa20.27■□□□□ 0.84
LTBP4-221ENST00000598178 MLH3Q9UHC1 1453 aa20.27■□□□□ 0.84
LTBP4-221ENST00000598178 LTBP4Q8N2S1 1624 aa20.27■□□□□ 0.83
LTBP4-221ENST00000598178 AGLP35573 1532 aa20.27■□□□□ 0.83
LTBP4-221ENST00000598178 AFAP1Q8N556 730 aa20.25■□□□□ 0.83
LTBP4-221ENST00000598178 TROQ12816 1431 aaPredicted RBP20.25■□□□□ 0.83
LTBP4-221ENST00000598178 CASKIN1Q8WXD9 1431 aa20.25■□□□□ 0.83
LTBP4-221ENST00000598178 ARHGAP5Q13017 1502 aa20.24■□□□□ 0.83
LTBP4-221ENST00000598178 LRRIQ1Q96JM4 1722 aa20.24■□□□□ 0.83
LTBP4-221ENST00000598178 FYCO1Q9BQS8 1478 aa20.24■□□□□ 0.83
LTBP4-221ENST00000598178 TRAPPC8Q9Y2L5 1435 aa20.23■□□□□ 0.83
LTBP4-221ENST00000598178 ABCA6Q8N139 1617 aa20.23■□□□□ 0.83
LTBP4-221ENST00000598178 CDC42BPBQ9Y5S2 1711 aa20.21■□□□□ 0.83
LTBP4-221ENST00000598178 NCOA1Q15788 1441 aa20.19■□□□□ 0.82
LTBP4-221ENST00000598178 CNTLNQ9NXG0 1405 aa20.19■□□□□ 0.82
LTBP4-221ENST00000598178 ESF1Q9H501 851 aaKnown RBP20.16■□□□□ 0.82
LTBP4-221ENST00000598178 ABCC1P33527 1531 aa20.16■□□□□ 0.82
LTBP4-221ENST00000598178 PREX2Q70Z35 1606 aa20.16■□□□□ 0.82
LTBP4-221ENST00000598178 NPATQ14207 1427 aa20.15■□□□□ 0.82
LTBP4-221ENST00000598178 MROH2AA6NES4 1674 aa20.15■□□□□ 0.82
LTBP4-221ENST00000598178 KIDINS220Q9ULH0 1771 aa20.14■□□□□ 0.81
LTBP4-221ENST00000598178 MYT1LQ9UL68 1186 aa20.14■□□□□ 0.81
LTBP4-221ENST00000598178 ITSN2Q9NZM3 1697 aa20.13■□□□□ 0.81
LTBP4-221ENST00000598178 CAMSAP1Q5T5Y3 1602 aa20.1■□□□□ 0.81
LTBP4-221ENST00000598178 CDC42BPAQ5VT25 1732 aa20.06■□□□□ 0.8
LTBP4-221ENST00000598178 PLA2R1Q13018 1463 aa20.05■□□□□ 0.8
LTBP4-221ENST00000598178 CEP162Q5TB80 1403 aa20.05■□□□□ 0.8
LTBP4-221ENST00000598178 ZNF142P52746 1687 aaPredicted RBP20.05■□□□□ 0.8
LTBP4-221ENST00000598178 ZMYM3Q14202 1370 aa20.05■□□□□ 0.8
LTBP4-221ENST00000598178 SAMD9LQ8IVG5 1584 aa20.04■□□□□ 0.8
LTBP4-221ENST00000598178 PKD2Q13563 968 aa20.02■□□□□ 0.8
LTBP4-221ENST00000598178 TCOF1Q13428 1488 aaKnown RBP20.01■□□□□ 0.79
LTBP4-221ENST00000598178 MTUS2Q5JR59 1369 aa20.01■□□□□ 0.79
LTBP4-221ENST00000598178 MYO3AQ8NEV4 1616 aa19.99■□□□□ 0.79
LTBP4-221ENST00000598178 PLXNC1O60486 1568 aa19.99■□□□□ 0.79
LTBP4-221ENST00000598178 ZNF335Q9H4Z2 1342 aaPredicted RBP19.99■□□□□ 0.79
LTBP4-221ENST00000598178 SUPT6HQ7KZ85 1726 aaKnown RBP19.99■□□□□ 0.79
LTBP4-221ENST00000598178 UBAP1LF5GYI3 381 aa19.98■□□□□ 0.79
LTBP4-221ENST00000598178 CEP170BQ9Y4F5 1589 aaPredicted RBP19.98■□□□□ 0.79
LTBP4-221ENST00000598178 NCKAP5LQ9HCH0 1330 aa19.98■□□□□ 0.79
LTBP4-221ENST00000598178 EHBP1L1Q8N3D4 1523 aa19.97■□□□□ 0.79
LTBP4-221ENST00000598178 CLTCQ00610 1675 aaKnown RBP19.97■□□□□ 0.79
LTBP4-221ENST00000598178 PTPRKQ15262 1439 aa19.95■□□□□ 0.78
LTBP4-221ENST00000598178 SPAG9O60271 1321 aaKnown RBP19.95■□□□□ 0.78
LTBP4-221ENST00000598178 CCNB3Q8WWL7 1395 aa19.95■□□□□ 0.78
LTBP4-221ENST00000598178 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
LTBP4-221ENST00000598178 ATP7AQ04656 1500 aa19.94■□□□□ 0.78
LTBP4-221ENST00000598178 SYCP2Q9BX26 1530 aa19.94■□□□□ 0.78
LTBP4-221ENST00000598178 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
LTBP4-221ENST00000598178 INO80Q9ULG1 1556 aaPredicted RBP19.94■□□□□ 0.78
LTBP4-221ENST00000598178 PLEKHH2Q8IVE3 1493 aa19.93■□□□□ 0.78
LTBP4-221ENST00000598178 GPATCH8Q9UKJ3 1502 aaKnown RBP19.93■□□□□ 0.78
LTBP4-221ENST00000598178 ZNF777Q9ULD5 760 aaPredicted RBP19.92■□□□□ 0.78
LTBP4-221ENST00000598178 A2MP01023 1474 aa19.92■□□□□ 0.78
LTBP4-221ENST00000598178 CFDP1Q9UEE9 299 aaPredicted RBP19.89■□□□□ 0.77
LTBP4-221ENST00000598178 TIAM1Q13009 1591 aa19.88■□□□□ 0.77
LTBP4-221ENST00000598178 ADGBQ8N7X0 1667 aa19.87■□□□□ 0.77
LTBP4-221ENST00000598178 A2ML1A8K2U0 1454 aa19.87■□□□□ 0.77
LTBP4-221ENST00000598178 HNRNPMP52272 730 aaKnown RBP eCLIP19.87■□□□□ 0.77
LTBP4-221ENST00000598178 DNMT1P26358 1616 aaKnown RBP19.87■□□□□ 0.77
LTBP4-221ENST00000598178 CPS1P31327 1500 aa19.86■□□□□ 0.77
LTBP4-221ENST00000598178 MED1Q15648 1581 aaPredicted RBP19.85■□□□□ 0.77
LTBP4-221ENST00000598178 POLR1AO95602 1720 aaPredicted RBP19.85■□□□□ 0.77
LTBP4-221ENST00000598178 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
LTBP4-221ENST00000598178 GGT6Q6P531 493 aa19.83■□□□□ 0.77
LTBP4-221ENST00000598178 TOM1O60784 492 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms