RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 SHROOM2Q13796 1616 aa6.09□□□□□ -1.43
LRIT3-202ENST00000594814 CUL7Q14999 1698 aa6.09□□□□□ -1.43
LRIT3-202ENST00000594814 CHMP7Q8WUX9 453 aaPredicted RBP6.09□□□□□ -1.43
LRIT3-202ENST00000594814 TMED8Q6PL24 325 aaPredicted RBP6.08□□□□□ -1.44
LRIT3-202ENST00000594814 MIER1Q8N108 512 aa6.08□□□□□ -1.44
LRIT3-202ENST00000594814 DISP1Q96F81 1524 aa6.08□□□□□ -1.44
LRIT3-202ENST00000594814 RBM19Q9Y4C8 960 aaKnown RBP6.08□□□□□ -1.44
LRIT3-202ENST00000594814 SYNJ2O15056 1496 aa6.08□□□□□ -1.44
LRIT3-202ENST00000594814 NEFLP07196 543 aa6.07□□□□□ -1.44
LRIT3-202ENST00000594814 LRRIQ1Q96JM4 1722 aa6.07□□□□□ -1.44
LRIT3-202ENST00000594814 CHD1O14646 1710 aa6.07□□□□□ -1.44
LRIT3-202ENST00000594814 HSP90B1P14625 803 aaKnown RBP6.06□□□□□ -1.44
LRIT3-202ENST00000594814 NPM1P06748 294 aaKnown RBP eCLIP6.06□□□□□ -1.44
LRIT3-202ENST00000594814 MAGI1Q96QZ7 1491 aaPredicted RBP6.06□□□□□ -1.44
LRIT3-202ENST00000594814 CTTNBP2Q8WZ74 1663 aa6.06□□□□□ -1.44
LRIT3-202ENST00000594814 NUP160Q12769 1436 aa6.06□□□□□ -1.44
LRIT3-202ENST00000594814 VPS8Q8N3P4 1428 aa6.06□□□□□ -1.44
LRIT3-202ENST00000594814 RNF216Q9NWF9 866 aaPredicted RBP6.06□□□□□ -1.44
LRIT3-202ENST00000594814 KDM6BO15054 1643 aa6.06□□□□□ -1.44
LRIT3-202ENST00000594814 GLIPR1L2Q4G1C9 344 aa6.05□□□□□ -1.44
LRIT3-202ENST00000594814 JPH4Q96JJ6 628 aa6.05□□□□□ -1.44
LRIT3-202ENST00000594814 SAMD9Q5K651 1589 aa6.05□□□□□ -1.44
LRIT3-202ENST00000594814 USP35Q9P2H5 1018 aa6.05□□□□□ -1.44
LRIT3-202ENST00000594814 C11orf95C9JLR9 678 aaPredicted RBP6.04□□□□□ -1.44
LRIT3-202ENST00000594814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.04□□□□□ -1.44
LRIT3-202ENST00000594814 NPM3O75607 178 aaKnown RBP6.04□□□□□ -1.44
LRIT3-202ENST00000594814 MAGI3Q5TCQ9 1506 aa6.04□□□□□ -1.44
LRIT3-202ENST00000594814 CCER2I3L3R5 266 aa6.03□□□□□ -1.44
LRIT3-202ENST00000594814 BRPF3Q9ULD4 1205 aa6.03□□□□□ -1.44
LRIT3-202ENST00000594814 KIAA0586Q9BVV6 1533 aa6.03□□□□□ -1.44
LRIT3-202ENST00000594814 PCF11O94913 1555 aaKnown RBP6.03□□□□□ -1.44
LRIT3-202ENST00000594814 IQGAP2Q13576 1575 aa6.03□□□□□ -1.44
LRIT3-202ENST00000594814 ATP1B4Q9UN42 357 aaPredicted RBP6.03□□□□□ -1.44
LRIT3-202ENST00000594814 PLB1Q6P1J6 1458 aa6.02□□□□□ -1.45
LRIT3-202ENST00000594814 DEKP35659 375 aaKnown RBP6.02□□□□□ -1.45
LRIT3-202ENST00000594814 CC2D2BQ6DHV5 1058 aa6.02□□□□□ -1.45
LRIT3-202ENST00000594814 PKD2Q13563 968 aa6.01□□□□□ -1.45
LRIT3-202ENST00000594814 UGGT2Q9NYU1 1516 aa6.01□□□□□ -1.45
LRIT3-202ENST00000594814 BRPF1P55201 1214 aaPredicted RBP6□□□□□ -1.45
LRIT3-202ENST00000594814 CDK13Q14004 1512 aaKnown RBP6□□□□□ -1.45
LRIT3-202ENST00000594814 KIAA0556O60303 1618 aa6□□□□□ -1.45
LRIT3-202ENST00000594814 PRG4Q92954 1404 aaPredicted RBP6□□□□□ -1.45
LRIT3-202ENST00000594814 KCNG1Q9UIX4 513 aa6□□□□□ -1.45
LRIT3-202ENST00000594814 PHLDB1Q86UU1 1377 aa5.99□□□□□ -1.45
LRIT3-202ENST00000594814 NUP153P49790 1475 aaKnown RBP5.98□□□□□ -1.45
LRIT3-202ENST00000594814 ADRA2BP18089 450 aa5.98□□□□□ -1.45
LRIT3-202ENST00000594814 TICAM2Q86XR7 235 aa5.97□□□□□ -1.45
LRIT3-202ENST00000594814 CASKIN1Q8WXD9 1431 aa5.97□□□□□ -1.45
LRIT3-202ENST00000594814 PRDM16Q9HAZ2 1276 aa5.97□□□□□ -1.45
LRIT3-202ENST00000594814 MAPKBP1O60336 1514 aa5.97□□□□□ -1.45
LRIT3-202ENST00000594814 GRIPAP1Q4V328 841 aa5.97□□□□□ -1.45
LRIT3-202ENST00000594814 TIAM1Q13009 1591 aa5.96□□□□□ -1.46
LRIT3-202ENST00000594814 LRRC9Q6ZRR7 1453 aa5.96□□□□□ -1.46
LRIT3-202ENST00000594814 EFCAB5A4FU69 1503 aa5.96□□□□□ -1.46
LRIT3-202ENST00000594814 GLI2P10070 1586 aa5.96□□□□□ -1.46
LRIT3-202ENST00000594814 RTL5Q5HYW3 569 aaPredicted RBP5.95□□□□□ -1.46
LRIT3-202ENST00000594814 ZNF644Q9H582 1327 aaPredicted RBP5.95□□□□□ -1.46
LRIT3-202ENST00000594814 EPRSP07814 1512 aaKnown RBP5.95□□□□□ -1.46
LRIT3-202ENST00000594814 MSH5O43196 834 aa5.95□□□□□ -1.46
LRIT3-202ENST00000594814 HNRNPUL2Q1KMD3 747 aaKnown RBP5.94□□□□□ -1.46
LRIT3-202ENST00000594814 NOP58Q9Y2X3 529 aaKnown RBP5.94□□□□□ -1.46
LRIT3-202ENST00000594814 ATP10BO94823 1461 aa5.94□□□□□ -1.46
LRIT3-202ENST00000594814 WASHC2AQ641Q2 1341 aa5.94□□□□□ -1.46
LRIT3-202ENST00000594814 WASHC2CQ9Y4E1 1318 aa5.94□□□□□ -1.46
LRIT3-202ENST00000594814 OSCARQ8IYS5 282 aa5.94□□□□□ -1.46
LRIT3-202ENST00000594814 PTPRKQ15262 1439 aa5.94□□□□□ -1.46
LRIT3-202ENST00000594814 FYCO1Q9BQS8 1478 aa5.93□□□□□ -1.46
LRIT3-202ENST00000594814 ABCA8O94911 1581 aa5.93□□□□□ -1.46
LRIT3-202ENST00000594814 ARID3AQ99856 593 aa5.93□□□□□ -1.46
LRIT3-202ENST00000594814 ITGAEP38570 1179 aa5.92□□□□□ -1.46
LRIT3-202ENST00000594814 FMN1Q68DA7 1419 aa5.92□□□□□ -1.46
LRIT3-202ENST00000594814 PPRC1Q5VV67 1664 aaKnown RBP5.92□□□□□ -1.46
LRIT3-202ENST00000594814 CDK11BP21127 795 aaKnown RBP5.92□□□□□ -1.46
LRIT3-202ENST00000594814 ZFP91Q96JP5 570 aaPredicted RBP5.92□□□□□ -1.46
LRIT3-202ENST00000594814 PTPRGP23470 1445 aa5.92□□□□□ -1.46
LRIT3-202ENST00000594814 RAPGEF6Q8TEU7 1601 aa5.92□□□□□ -1.46
LRIT3-202ENST00000594814 CFAP43Q8NDM7 1665 aa5.92□□□□□ -1.46
LRIT3-202ENST00000594814 FKBP8Q14318 412 aa5.91□□□□□ -1.46
LRIT3-202ENST00000594814 KIF14Q15058 1648 aa5.91□□□□□ -1.46
LRIT3-202ENST00000594814 PPP4R2Q9NY27 417 aa5.91□□□□□ -1.46
LRIT3-202ENST00000594814 DHX57Q6P158 1386 aaKnown RBP5.91□□□□□ -1.46
LRIT3-202ENST00000594814 PPM1GO15355 546 aaPredicted RBP5.9□□□□□ -1.46
LRIT3-202ENST00000594814 ADCY10Q96PN6 1610 aa5.9□□□□□ -1.47
LRIT3-202ENST00000594814 BBXQ8WY36 941 aaPredicted RBP5.9□□□□□ -1.47
LRIT3-202ENST00000594814 ABCC2Q92887 1545 aa5.89□□□□□ -1.47
LRIT3-202ENST00000594814 NCOA2Q15596 1464 aa5.89□□□□□ -1.47
LRIT3-202ENST00000594814 ZNF428Q96B54 188 aa5.89□□□□□ -1.47
LRIT3-202ENST00000594814 RRBP1Q9P2E9 1410 aaKnown RBP5.89□□□□□ -1.47
LRIT3-202ENST00000594814 CYB5RLQ6IPT4 315 aa5.89□□□□□ -1.47
LRIT3-202ENST00000594814 CERS3Q8IU89 383 aa5.89□□□□□ -1.47
LRIT3-202ENST00000594814 CCDC136Q96JN2 1154 aa5.89□□□□□ -1.47
LRIT3-202ENST00000594814 CCDC9Q9Y3X0 531 aaKnown RBP5.89□□□□□ -1.47
LRIT3-202ENST00000594814 MAP3K1Q13233 1512 aa5.89□□□□□ -1.47
LRIT3-202ENST00000594814 CARMIL2Q6F5E8 1435 aa5.88□□□□□ -1.47
LRIT3-202ENST00000594814 UACAQ9BZF9 1416 aa5.88□□□□□ -1.47
LRIT3-202ENST00000594814 ANP32AP39687 249 aaKnown RBP5.88□□□□□ -1.47
LRIT3-202ENST00000594814 FAM43AQ8N2R8 423 aa5.88□□□□□ -1.47
LRIT3-202ENST00000594814 KCNH8Q96L42 1107 aa5.88□□□□□ -1.47
LRIT3-202ENST00000594814 ZC3H4Q9UPT8 1303 aaKnown RBP5.88□□□□□ -1.47
LRIT3-202ENST00000594814 TEX2Q8IWB9 1127 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms