RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GPATCH8Q9UKJ3 1502 aaKnown RBP22.19■■□□□ 1.14
PNKP-204ENST00000594661 ZNF644Q9H582 1327 aaPredicted RBP22.18■■□□□ 1.14
PNKP-204ENST00000594661 TSHZ2Q9NRE2 1034 aa22.18■■□□□ 1.14
PNKP-204ENST00000594661 ABCC2Q92887 1545 aa22.17■■□□□ 1.14
PNKP-204ENST00000594661 CHIC2Q9UKJ5 165 aa22.16■■□□□ 1.14
PNKP-204ENST00000594661 ABCC10Q5T3U5 1492 aa22.16■■□□□ 1.14
PNKP-204ENST00000594661 DNMT1P26358 1616 aaKnown RBP22.15■■□□□ 1.14
PNKP-204ENST00000594661 DAPK1P53355 1430 aa22.14■■□□□ 1.13
PNKP-204ENST00000594661 GCC2Q8IWJ2 1684 aa22.14■■□□□ 1.13
PNKP-204ENST00000594661 CAMSAP2Q08AD1 1489 aa22.14■■□□□ 1.13
PNKP-204ENST00000594661 CFDP1Q9UEE9 299 aaPredicted RBP22.13■■□□□ 1.13
PNKP-204ENST00000594661 CDC42BPAQ5VT25 1732 aa22.13■■□□□ 1.13
PNKP-204ENST00000594661 RRP7BPQ9NSQ0 103 aa22.13■■□□□ 1.13
PNKP-204ENST00000594661 ABCC5O15440 1437 aa22.12■■□□□ 1.13
PNKP-204ENST00000594661 AKNAQ7Z591 1439 aa22.12■■□□□ 1.13
PNKP-204ENST00000594661 SUPT16HQ9Y5B9 1047 aaKnown RBP22.1■■□□□ 1.13
PNKP-204ENST00000594661 MIER1Q8N108 512 aa22.09■■□□□ 1.13
PNKP-204ENST00000594661 ERICH6Q7L0X2 663 aa22.07■■□□□ 1.12
PNKP-204ENST00000594661 KDM6BO15054 1643 aa22.07■■□□□ 1.12
PNKP-204ENST00000594661 ZNF777Q9ULD5 760 aaPredicted RBP22.06■■□□□ 1.12
PNKP-204ENST00000594661 UHRF1BP1LA0JNW5 1464 aa22.05■■□□□ 1.12
PNKP-204ENST00000594661 ROCK1Q13464 1354 aa22.04■■□□□ 1.12
PNKP-204ENST00000594661 ZCCHC11Q5TAX3 1644 aaKnown RBP22.03■■□□□ 1.12
PNKP-204ENST00000594661 CROCC2H7BZ55 1655 aa22.01■■□□□ 1.11
PNKP-204ENST00000594661 SIN3AQ96ST3 1273 aa22■■□□□ 1.11
PNKP-204ENST00000594661 KDM5BQ9UGL1 1544 aa22■■□□□ 1.11
PNKP-204ENST00000594661 TTC37Q6PGP7 1564 aa22■■□□□ 1.11
PNKP-204ENST00000594661 PREX2Q70Z35 1606 aa21.99■■□□□ 1.11
PNKP-204ENST00000594661 CDC42BPBQ9Y5S2 1711 aa21.98■■□□□ 1.11
PNKP-204ENST00000594661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.98■■□□□ 1.11
PNKP-204ENST00000594661 ADGBQ8N7X0 1667 aa21.97■■□□□ 1.11
PNKP-204ENST00000594661 OSCARQ8IYS5 282 aa21.97■■□□□ 1.11
PNKP-204ENST00000594661 ADGRL2O95490 1459 aa21.94■■□□□ 1.1
PNKP-204ENST00000594661 SAMD9LQ8IVG5 1584 aa21.93■■□□□ 1.1
PNKP-204ENST00000594661 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
PNKP-204ENST00000594661 DENND4BO75064 1496 aaPredicted RBP21.92■■□□□ 1.1
PNKP-204ENST00000594661 TRIM52Q96A61 297 aa21.91■■□□□ 1.1
PNKP-204ENST00000594661 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
PNKP-204ENST00000594661 SHANK2Q9UPX8 1470 aa21.9■■□□□ 1.1
PNKP-204ENST00000594661 MYO5CQ9NQX4 1742 aa21.89■■□□□ 1.1
PNKP-204ENST00000594661 MBD5Q9P267 1494 aa21.89■■□□□ 1.1
PNKP-204ENST00000594661 ARHGEF5Q12774 1597 aa21.89■■□□□ 1.09
PNKP-204ENST00000594661 ARHGAP5Q13017 1502 aa21.89■■□□□ 1.09
PNKP-204ENST00000594661 C9orf84Q5VXU9 1444 aa21.88■■□□□ 1.09
PNKP-204ENST00000594661 HNRNPMP52272 730 aaKnown RBP eCLIP21.88■■□□□ 1.09
PNKP-204ENST00000594661 ANKRD30AQ9BXX3 1397 aa21.87■■□□□ 1.09
PNKP-204ENST00000594661 SYCP2Q9BX26 1530 aa21.84■■□□□ 1.09
PNKP-204ENST00000594661 MPHOSPH9Q99550 1183 aa21.83■■□□□ 1.09
PNKP-204ENST00000594661 CCDC141Q6ZP82 1450 aa21.83■■□□□ 1.09
PNKP-204ENST00000594661 TIMELESSQ9UNS1 1208 aa21.83■■□□□ 1.08
PNKP-204ENST00000594661 TSPY4P0CV99 314 aa21.8■■□□□ 1.08
PNKP-204ENST00000594661 TSPY10P0CW01 314 aa21.8■■□□□ 1.08
PNKP-204ENST00000594661 WDR7Q9Y4E6 1490 aa21.8■■□□□ 1.08
PNKP-204ENST00000594661 PLCH2O75038 1416 aa21.8■■□□□ 1.08
PNKP-204ENST00000594661 ANKRD50Q9ULJ7 1429 aa21.79■■□□□ 1.08
PNKP-204ENST00000594661 TONSLQ96HA7 1378 aa21.77■■□□□ 1.08
PNKP-204ENST00000594661 PZPP20742 1482 aa21.76■■□□□ 1.07
PNKP-204ENST00000594661 FOXD1Q16676 465 aa21.76■■□□□ 1.07
PNKP-204ENST00000594661 KIAA1107Q9UPP5 1409 aa21.75■■□□□ 1.07
PNKP-204ENST00000594661 PLEKHH2Q8IVE3 1493 aa21.75■■□□□ 1.07
PNKP-204ENST00000594661 RSPH4AQ5TD94 716 aa21.75■■□□□ 1.07
PNKP-204ENST00000594661 KIF15Q9NS87 1388 aa21.75■■□□□ 1.07
PNKP-204ENST00000594661 ARHGEF12Q9NZN5 1544 aa21.75■■□□□ 1.07
PNKP-204ENST00000594661 PPP1R15AO75807 674 aaPredicted RBP21.74■■□□□ 1.07
PNKP-204ENST00000594661 MAST1Q9Y2H9 1570 aa21.73■■□□□ 1.07
PNKP-204ENST00000594661 ASXL2Q76L83 1435 aa21.73■■□□□ 1.07
PNKP-204ENST00000594661 SLC4A1APQ9BWU0 796 aaKnown RBP21.73■■□□□ 1.07
PNKP-204ENST00000594661 ABCC1P33527 1531 aa21.71■■□□□ 1.07
PNKP-204ENST00000594661 EFCAB2Q5VUJ9 269 aa21.71■■□□□ 1.07
PNKP-204ENST00000594661 ARAP3Q8WWN8 1544 aa21.7■■□□□ 1.06
PNKP-204ENST00000594661 ANKRD30BQ9BXX2 1392 aa21.7■■□□□ 1.06
PNKP-204ENST00000594661 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
PNKP-204ENST00000594661 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
PNKP-204ENST00000594661 KDM5DQ9BY66 1539 aa21.64■■□□□ 1.05
PNKP-204ENST00000594661 TRAPPC8Q9Y2L5 1435 aa21.64■■□□□ 1.05
PNKP-204ENST00000594661 NUP155O75694 1391 aa21.63■■□□□ 1.05
PNKP-204ENST00000594661 NPM1P06748 294 aaKnown RBP eCLIP21.63■■□□□ 1.05
PNKP-204ENST00000594661 RPRD2Q5VT52 1461 aaKnown RBP21.62■■□□□ 1.05
PNKP-204ENST00000594661 FANCAO15360 1455 aa21.61■■□□□ 1.05
PNKP-204ENST00000594661 PKD2Q13563 968 aa21.6■■□□□ 1.05
PNKP-204ENST00000594661 RBM19Q9Y4C8 960 aaKnown RBP21.57■■□□□ 1.04
PNKP-204ENST00000594661 DUOX2Q9NRD8 1548 aa21.56■■□□□ 1.04
PNKP-204ENST00000594661 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
PNKP-204ENST00000594661 L3MBTL2Q969R5 705 aa21.55■■□□□ 1.04
PNKP-204ENST00000594661 UNC13BO14795 1591 aa21.55■■□□□ 1.04
PNKP-204ENST00000594661 AFAP1Q8N556 730 aa21.55■■□□□ 1.04
PNKP-204ENST00000594661 ZFYVE16Q7Z3T8 1539 aa21.54■■□□□ 1.04
PNKP-204ENST00000594661 FAM135AQ9P2D6 1515 aa21.54■■□□□ 1.04
PNKP-204ENST00000594661 ADGRL1O94910 1474 aa21.52■■□□□ 1.04
PNKP-204ENST00000594661 SPAG9O60271 1321 aaKnown RBP21.52■■□□□ 1.04
PNKP-204ENST00000594661 ERBINQ96RT1 1412 aa21.51■■□□□ 1.03
PNKP-204ENST00000594661 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
PNKP-204ENST00000594661 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
PNKP-204ENST00000594661 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
PNKP-204ENST00000594661 RTEL1-TNFRSF6BF6WH68 1400 aa21.5■■□□□ 1.03
PNKP-204ENST00000594661 MYT1LQ9UL68 1186 aa21.5■■□□□ 1.03
PNKP-204ENST00000594661 SCAPERQ9BY12 1400 aa21.5■■□□□ 1.03
PNKP-204ENST00000594661 HIRIP3Q9BW71 556 aaPredicted RBP21.49■■□□□ 1.03
PNKP-204ENST00000594661 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
PNKP-204ENST00000594661 CD109Q6YHK3 1445 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms