RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 MLECQ14165 292 aa14.47□□□□□ -0.09
SMG9-202ENST00000594081 STRCQ7RTU9 1775 aa14.47□□□□□ -0.09
SMG9-202ENST00000594081 MYO5CQ9NQX4 1742 aa14.46□□□□□ -0.09
SMG9-202ENST00000594081 C9orf84Q5VXU9 1444 aa14.46□□□□□ -0.09
SMG9-202ENST00000594081 SPATA31D1Q6ZQQ2 1576 aa14.46□□□□□ -0.09
SMG9-202ENST00000594081 DISP3Q9P2K9 1392 aa14.45□□□□□ -0.1
SMG9-202ENST00000594081 SCAPERQ9BY12 1400 aa14.44□□□□□ -0.1
SMG9-202ENST00000594081 RANGAP1P46060 587 aaPredicted RBP14.44□□□□□ -0.1
SMG9-202ENST00000594081 ATP10AO60312 1499 aa14.44□□□□□ -0.1
SMG9-202ENST00000594081 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
SMG9-202ENST00000594081 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
SMG9-202ENST00000594081 PLCH2O75038 1416 aa14.42□□□□□ -0.1
SMG9-202ENST00000594081 ILDR2Q71H61 639 aa14.42□□□□□ -0.1
SMG9-202ENST00000594081 UHRF1BP1Q6BDS2 1440 aa14.41□□□□□ -0.1
SMG9-202ENST00000594081 KDM5CP41229 1560 aa14.4□□□□□ -0.1
SMG9-202ENST00000594081 SOCS7O14512 581 aa14.39□□□□□ -0.11
SMG9-202ENST00000594081 KIF14Q15058 1648 aa14.39□□□□□ -0.11
SMG9-202ENST00000594081 EEA1Q15075 1411 aa14.39□□□□□ -0.11
SMG9-202ENST00000594081 C3P01024 1663 aa14.39□□□□□ -0.11
SMG9-202ENST00000594081 DIP2CQ9Y2E4 1556 aa14.39□□□□□ -0.11
SMG9-202ENST00000594081 ZNF518AQ6AHZ1 1483 aa14.38□□□□□ -0.11
SMG9-202ENST00000594081 CEBPAP49715 358 aaPredicted RBP14.37□□□□□ -0.11
SMG9-202ENST00000594081 REREQ9P2R6 1566 aa14.37□□□□□ -0.11
SMG9-202ENST00000594081 ABCA6Q8N139 1617 aa14.37□□□□□ -0.11
SMG9-202ENST00000594081 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
SMG9-202ENST00000594081 ARHGAP5Q13017 1502 aa14.35□□□□□ -0.11
SMG9-202ENST00000594081 LTBP4Q8N2S1 1624 aa14.33□□□□□ -0.11
SMG9-202ENST00000594081 PTPRTO14522 1441 aa14.33□□□□□ -0.11
SMG9-202ENST00000594081 SETD1BQ9UPS6 1966 aaKnown RBP14.33□□□□□ -0.12
SMG9-202ENST00000594081 IQSEC2Q5JU85 1478 aa14.31□□□□□ -0.12
SMG9-202ENST00000594081 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
SMG9-202ENST00000594081 LRRIQ1Q96JM4 1722 aa14.31□□□□□ -0.12
SMG9-202ENST00000594081 CDC42BPBQ9Y5S2 1711 aa14.3□□□□□ -0.12
SMG9-202ENST00000594081 FMN1Q68DA7 1419 aa14.3□□□□□ -0.12
SMG9-202ENST00000594081 ABCC1P33527 1531 aa14.3□□□□□ -0.12
SMG9-202ENST00000594081 AGLP35573 1532 aa14.3□□□□□ -0.12
SMG9-202ENST00000594081 PREX2Q70Z35 1606 aa14.3□□□□□ -0.12
SMG9-202ENST00000594081 ITSN2Q9NZM3 1697 aa14.3□□□□□ -0.12
SMG9-202ENST00000594081 TROQ12816 1431 aaPredicted RBP14.29□□□□□ -0.12
SMG9-202ENST00000594081 NCOA1Q15788 1441 aa14.28□□□□□ -0.12
SMG9-202ENST00000594081 MLH3Q9UHC1 1453 aa14.28□□□□□ -0.12
SMG9-202ENST00000594081 CLIP1P30622 1438 aa14.27□□□□□ -0.12
SMG9-202ENST00000594081 AFAP1Q8N556 730 aa14.27□□□□□ -0.13
SMG9-202ENST00000594081 MROH2AA6NES4 1674 aa14.26□□□□□ -0.13
SMG9-202ENST00000594081 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
SMG9-202ENST00000594081 TRAPPC8Q9Y2L5 1435 aa14.25□□□□□ -0.13
SMG9-202ENST00000594081 KIDINS220Q9ULH0 1771 aa14.25□□□□□ -0.13
SMG9-202ENST00000594081 PHF23Q9BUL5 403 aaPredicted RBP14.25□□□□□ -0.13
SMG9-202ENST00000594081 MYT1LQ9UL68 1186 aa14.25□□□□□ -0.13
SMG9-202ENST00000594081 CAMSAP1Q5T5Y3 1602 aa14.25□□□□□ -0.13
SMG9-202ENST00000594081 ATP1B4Q9UN42 357 aaPredicted RBP14.24□□□□□ -0.13
SMG9-202ENST00000594081 CDK11AQ9UQ88 783 aaPredicted RBP14.24□□□□□ -0.13
SMG9-202ENST00000594081 CNTLNQ9NXG0 1405 aa14.24□□□□□ -0.13
SMG9-202ENST00000594081 ZNF142P52746 1687 aaPredicted RBP14.23□□□□□ -0.13
SMG9-202ENST00000594081 MYO3AQ8NEV4 1616 aa14.22□□□□□ -0.13
SMG9-202ENST00000594081 ESF1Q9H501 851 aaKnown RBP14.21□□□□□ -0.13
SMG9-202ENST00000594081 CDC42BPAQ5VT25 1732 aa14.21□□□□□ -0.14
SMG9-202ENST00000594081 SUPT6HQ7KZ85 1726 aaKnown RBP14.21□□□□□ -0.14
SMG9-202ENST00000594081 NPATQ14207 1427 aa14.2□□□□□ -0.14
SMG9-202ENST00000594081 SAMD9LQ8IVG5 1584 aa14.18□□□□□ -0.14
SMG9-202ENST00000594081 CLTCQ00610 1675 aaKnown RBP14.18□□□□□ -0.14
SMG9-202ENST00000594081 CCDC18Q5T9S5 1454 aa14.16□□□□□ -0.14
SMG9-202ENST00000594081 CEP170BQ9Y4F5 1589 aaPredicted RBP14.16□□□□□ -0.14
SMG9-202ENST00000594081 ZNF335Q9H4Z2 1342 aaPredicted RBP14.15□□□□□ -0.14
SMG9-202ENST00000594081 SYCP2Q9BX26 1530 aa14.15□□□□□ -0.14
SMG9-202ENST00000594081 PLXNC1O60486 1568 aa14.15□□□□□ -0.14
SMG9-202ENST00000594081 PLA2R1Q13018 1463 aa14.15□□□□□ -0.14
SMG9-202ENST00000594081 INO80Q9ULG1 1556 aaPredicted RBP14.14□□□□□ -0.15
SMG9-202ENST00000594081 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
SMG9-202ENST00000594081 TCOF1Q13428 1488 aaKnown RBP14.13□□□□□ -0.15
SMG9-202ENST00000594081 UBTFP17480 764 aaKnown RBP14.13□□□□□ -0.15
SMG9-202ENST00000594081 ATP7AQ04656 1500 aa14.13□□□□□ -0.15
SMG9-202ENST00000594081 ZMYM3Q14202 1370 aa14.12□□□□□ -0.15
SMG9-202ENST00000594081 NCKAP5LQ9HCH0 1330 aa14.12□□□□□ -0.15
SMG9-202ENST00000594081 UBAP1LF5GYI3 381 aa14.11□□□□□ -0.15
SMG9-202ENST00000594081 MED1Q15648 1581 aaPredicted RBP14.11□□□□□ -0.15
SMG9-202ENST00000594081 CASKIN1Q8WXD9 1431 aa14.1□□□□□ -0.15
SMG9-202ENST00000594081 PTPRKQ15262 1439 aa14.09□□□□□ -0.15
SMG9-202ENST00000594081 POLR1AO95602 1720 aaPredicted RBP14.09□□□□□ -0.15
SMG9-202ENST00000594081 ADGBQ8N7X0 1667 aa14.07□□□□□ -0.16
SMG9-202ENST00000594081 A2MP01023 1474 aa14.07□□□□□ -0.16
SMG9-202ENST00000594081 FYCO1Q9BQS8 1478 aa14.07□□□□□ -0.16
SMG9-202ENST00000594081 PKD2Q13563 968 aa14.07□□□□□ -0.16
SMG9-202ENST00000594081 DNMT1P26358 1616 aaKnown RBP14.06□□□□□ -0.16
SMG9-202ENST00000594081 SPAG9O60271 1321 aaKnown RBP14.06□□□□□ -0.16
SMG9-202ENST00000594081 GPATCH8Q9UKJ3 1502 aaKnown RBP14.05□□□□□ -0.16
SMG9-202ENST00000594081 NEURL4Q96JN8 1562 aa14.05□□□□□ -0.16
SMG9-202ENST00000594081 ZNF777Q9ULD5 760 aaPredicted RBP14.04□□□□□ -0.16
SMG9-202ENST00000594081 PPP6R1Q9UPN7 881 aa14.04□□□□□ -0.16
SMG9-202ENST00000594081 A2ML1A8K2U0 1454 aa14.04□□□□□ -0.16
SMG9-202ENST00000594081 PLEKHH2Q8IVE3 1493 aa14.04□□□□□ -0.16
SMG9-202ENST00000594081 CPS1P31327 1500 aa14.03□□□□□ -0.16
SMG9-202ENST00000594081 KIAA1107Q9UPP5 1409 aa14.02□□□□□ -0.16
SMG9-202ENST00000594081 SCAF1Q9H7N4 1312 aaKnown RBP14□□□□□ -0.17
SMG9-202ENST00000594081 HNRNPMP52272 730 aaKnown RBP eCLIP14□□□□□ -0.17
SMG9-202ENST00000594081 HSPA1LP34931 641 aa13.99□□□□□ -0.17
SMG9-202ENST00000594081 GGT6Q6P531 493 aa13.99□□□□□ -0.17
SMG9-202ENST00000594081 PIP4K2BP78356 416 aa13.98□□□□□ -0.17
SMG9-202ENST00000594081 SHANK2Q9UPX8 1470 aa13.98□□□□□ -0.17
SMG9-202ENST00000594081 ALKQ9UM73 1620 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms