RNA–Protein interactions for RNA: ENST00000593586.1

TTC9B-202, Transcript of tetratricopeptide repeat domain 9B, humanhuman

Gene TTC9B, Length 2,323 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9B-202ENST00000593586 RAPGEF6Q8TEU7 1601 aa28.15■■■□□ 2.1
TTC9B-202ENST00000593586 NEFLP07196 543 aa28.14■■■□□ 2.1
TTC9B-202ENST00000593586 L3MBTL2Q969R5 705 aa28.14■■■□□ 2.1
TTC9B-202ENST00000593586 GRIN2AQ12879 1464 aa28.14■■■□□ 2.1
TTC9B-202ENST00000593586 FOXD1Q16676 465 aa28.13■■■□□ 2.09
TTC9B-202ENST00000593586 CDK11AQ9UQ88 783 aaPredicted RBP28.12■■■□□ 2.09
TTC9B-202ENST00000593586 ANKRD30BQ9BXX2 1392 aa28.11■■■□□ 2.09
TTC9B-202ENST00000593586 ZNF644Q9H582 1327 aaPredicted RBP28.1■■■□□ 2.09
TTC9B-202ENST00000593586 EIF4G3O43432 1585 aaKnown RBP28.08■■■□□ 2.09
TTC9B-202ENST00000593586 RPRD2Q5VT52 1461 aaKnown RBP28.08■■■□□ 2.09
TTC9B-202ENST00000593586 CNTLNQ9NXG0 1405 aa28.03■■■□□ 2.08
TTC9B-202ENST00000593586 TROQ12816 1431 aaPredicted RBP28.02■■■□□ 2.08
TTC9B-202ENST00000593586 TEX14Q8IWB6 1497 aa28.02■■■□□ 2.08
TTC9B-202ENST00000593586 SLC4A1APQ9BWU0 796 aaKnown RBP28.01■■■□□ 2.07
TTC9B-202ENST00000593586 NCOA1Q15788 1441 aa28■■■□□ 2.07
TTC9B-202ENST00000593586 PRG4Q92954 1404 aaPredicted RBP28■■■□□ 2.07
TTC9B-202ENST00000593586 HNRNPUQ00839 825 aaKnown RBP eCLIP27.98■■■□□ 2.07
TTC9B-202ENST00000593586 MAGI1Q96QZ7 1491 aaPredicted RBP27.98■■■□□ 2.07
TTC9B-202ENST00000593586 NBPF8Q3BBV2 869 aa27.98■■■□□ 2.07
TTC9B-202ENST00000593586 CCDC7Q96M83 1385 aa27.97■■■□□ 2.07
TTC9B-202ENST00000593586 CAMSAP2Q08AD1 1489 aa27.97■■■□□ 2.07
TTC9B-202ENST00000593586 C11orf95C9JLR9 678 aaPredicted RBP27.95■■■□□ 2.07
TTC9B-202ENST00000593586 CFDP1Q9UEE9 299 aaPredicted RBP27.95■■■□□ 2.07
TTC9B-202ENST00000593586 ITSN2Q9NZM3 1697 aa27.94■■■□□ 2.06
TTC9B-202ENST00000593586 CEP170Q5SW79 1584 aa27.94■■■□□ 2.06
TTC9B-202ENST00000593586 PLB1Q6P1J6 1458 aa27.94■■■□□ 2.06
TTC9B-202ENST00000593586 CHMP7Q8WUX9 453 aaPredicted RBP27.93■■■□□ 2.06
TTC9B-202ENST00000593586 GPATCH8Q9UKJ3 1502 aaKnown RBP27.93■■■□□ 2.06
TTC9B-202ENST00000593586 SYNJ2O15056 1496 aa27.92■■■□□ 2.06
TTC9B-202ENST00000593586 PZPP20742 1482 aa27.92■■■□□ 2.06
TTC9B-202ENST00000593586 ADCY10Q96PN6 1610 aa27.9■■■□□ 2.06
TTC9B-202ENST00000593586 ADGBQ8N7X0 1667 aa27.9■■■□□ 2.06
TTC9B-202ENST00000593586 SPATA31E1Q6ZUB1 1445 aa27.89■■■□□ 2.06
TTC9B-202ENST00000593586 KIF14Q15058 1648 aa27.88■■■□□ 2.05
TTC9B-202ENST00000593586 ADGRL2O95490 1459 aa27.87■■■□□ 2.05
TTC9B-202ENST00000593586 ERCC6Q03468 1493 aa27.87■■■□□ 2.05
TTC9B-202ENST00000593586 PRKRIP1Q9H875 184 aaPredicted RBP27.87■■■□□ 2.05
TTC9B-202ENST00000593586 CARMIL2Q6F5E8 1435 aa27.86■■■□□ 2.05
TTC9B-202ENST00000593586 CCDC184Q52MB2 194 aa27.84■■■□□ 2.05
TTC9B-202ENST00000593586 CROCC2H7BZ55 1655 aa27.83■■■□□ 2.05
TTC9B-202ENST00000593586 ZNF777Q9ULD5 760 aaPredicted RBP27.83■■■□□ 2.05
TTC9B-202ENST00000593586 KIF7Q2M1P5 1343 aa27.82■■■□□ 2.04
TTC9B-202ENST00000593586 POLR1AO95602 1720 aaPredicted RBP27.82■■■□□ 2.04
TTC9B-202ENST00000593586 NUP160Q12769 1436 aa27.82■■■□□ 2.04
TTC9B-202ENST00000593586 KIAA1107Q9UPP5 1409 aa27.82■■■□□ 2.04
TTC9B-202ENST00000593586 FBLN2P98095 1184 aa27.81■■■□□ 2.04
TTC9B-202ENST00000593586 JPH4Q96JJ6 628 aa27.81■■■□□ 2.04
TTC9B-202ENST00000593586 ANKRD30AQ9BXX3 1397 aa27.8■■■□□ 2.04
TTC9B-202ENST00000593586 MBD5Q9P267 1494 aa27.78■■■□□ 2.04
TTC9B-202ENST00000593586 MRS2Q9HD23 443 aa27.74■■■□□ 2.03
TTC9B-202ENST00000593586 PKD2Q13563 968 aa27.74■■■□□ 2.03
TTC9B-202ENST00000593586 ANKRD50Q9ULJ7 1429 aa27.74■■■□□ 2.03
TTC9B-202ENST00000593586 PLEKHD1A6NEE1 506 aa27.72■■■□□ 2.03
TTC9B-202ENST00000593586 ABCA8O94911 1581 aa27.71■■■□□ 2.03
TTC9B-202ENST00000593586 FAM9BQ8IZU0 186 aa27.71■■■□□ 2.03
TTC9B-202ENST00000593586 CDC42BPAQ5VT25 1732 aa27.7■■■□□ 2.02
TTC9B-202ENST00000593586 ABCC10Q5T3U5 1492 aa27.69■■■□□ 2.02
TTC9B-202ENST00000593586 SHANK2Q9UPX8 1470 aa27.69■■■□□ 2.02
TTC9B-202ENST00000593586 RBM19Q9Y4C8 960 aaKnown RBP27.69■■■□□ 2.02
TTC9B-202ENST00000593586 ATP10BO94823 1461 aa27.67■■■□□ 2.02
TTC9B-202ENST00000593586 USP47Q96K76 1375 aa27.67■■■□□ 2.02
TTC9B-202ENST00000593586 IRX6P78412 446 aaPredicted RBP27.66■■■□□ 2.02
TTC9B-202ENST00000593586 C9orf84Q5VXU9 1444 aa27.66■■■□□ 2.02
TTC9B-202ENST00000593586 ZBED9Q6R2W3 1325 aa27.66■■■□□ 2.02
TTC9B-202ENST00000593586 ERICH6BQ5W0A0 696 aa27.64■■■□□ 2.02
TTC9B-202ENST00000593586 ZNF326Q5BKZ1 582 aaKnown RBP27.63■■■□□ 2.01
TTC9B-202ENST00000593586 ANP32EQ9BTT0 268 aa27.62■■■□□ 2.01
TTC9B-202ENST00000593586 NUP155O75694 1391 aa27.62■■■□□ 2.01
TTC9B-202ENST00000593586 BCORL1Q5H9F3 1711 aa27.61■■■□□ 2.01
TTC9B-202ENST00000593586 DHX29Q7Z478 1369 aaKnown RBP27.61■■■□□ 2.01
TTC9B-202ENST00000593586 KDM5CP41229 1560 aa27.59■■■□□ 2.01
TTC9B-202ENST00000593586 UHRF1BP1Q6BDS2 1440 aa27.59■■■□□ 2.01
TTC9B-202ENST00000593586 ARID4BQ4LE39 1312 aaPredicted RBP27.58■■■□□ 2.01
TTC9B-202ENST00000593586 TSPY4P0CV99 314 aa27.58■■■□□ 2.01
TTC9B-202ENST00000593586 TSPY10P0CW01 314 aa27.58■■■□□ 2.01
TTC9B-202ENST00000593586 KDM5DQ9BY66 1539 aa27.58■■■□□ 2.01
TTC9B-202ENST00000593586 RALGAPBQ86X10 1494 aa27.56■■■□□ 2
TTC9B-202ENST00000593586 ARHGEF12Q9NZN5 1544 aa27.55■■■□□ 2
TTC9B-202ENST00000593586 KIF15Q9NS87 1388 aa27.53■■■□□ 2
TTC9B-202ENST00000593586 ARHGEF5Q12774 1597 aa27.52■■■□□ 2
TTC9B-202ENST00000593586 POLR3GLQ9BT43 218 aa27.52■■■□□ 2
TTC9B-202ENST00000593586 PPP4R2Q9NY27 417 aa27.52■■■□□ 2
TTC9B-202ENST00000593586 PTPRGP23470 1445 aa27.51■■□□□ 1.99
TTC9B-202ENST00000593586 HNRNPMP52272 730 aaKnown RBP eCLIP27.5■■□□□ 1.99
TTC9B-202ENST00000593586 ROCK2O75116 1388 aaKnown RBP27.48■■□□□ 1.99
TTC9B-202ENST00000593586 CARD11Q9BXL7 1154 aa27.47■■□□□ 1.99
TTC9B-202ENST00000593586 CCDC141Q6ZP82 1450 aa27.43■■□□□ 1.98
TTC9B-202ENST00000593586 CNGB1Q14028 1251 aaPredicted RBP27.42■■□□□ 1.98
TTC9B-202ENST00000593586 SAMD9LQ8IVG5 1584 aa27.41■■□□□ 1.98
TTC9B-202ENST00000593586 KDM2AQ9Y2K7 1162 aa27.4■■□□□ 1.98
TTC9B-202ENST00000593586 PREX2Q70Z35 1606 aa27.4■■□□□ 1.98
TTC9B-202ENST00000593586 CDC42BPBQ9Y5S2 1711 aa27.4■■□□□ 1.98
TTC9B-202ENST00000593586 SMG6Q86US8 1419 aaKnown RBP27.39■■□□□ 1.98
TTC9B-202ENST00000593586 RSPH4AQ5TD94 716 aa27.39■■□□□ 1.97
TTC9B-202ENST00000593586 DCAF11Q8TEB1 546 aa27.39■■□□□ 1.97
TTC9B-202ENST00000593586 FAM135AQ9P2D6 1515 aa27.37■■□□□ 1.97
TTC9B-202ENST00000593586 ST20-MTHFSA0A0A6YYL1 179 aa27.36■■□□□ 1.97
TTC9B-202ENST00000593586 PNISRQ8TF01 805 aaKnown RBP27.33■■□□□ 1.97
TTC9B-202ENST00000593586 FANCIQ9NVI1 1328 aa27.32■■□□□ 1.96
TTC9B-202ENST00000593586 B4GALNT3Q6L9W6 998 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms