RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 ZCCHC11Q5TAX3 1644 aaKnown RBP17.53■□□□□ 0.4
NPC1-214ENST00000593280 CFDP1Q9UEE9 299 aaPredicted RBP17.53■□□□□ 0.4
NPC1-214ENST00000593280 ADGBQ8N7X0 1667 aa17.52■□□□□ 0.4
NPC1-214ENST00000593280 ABCC5O15440 1437 aa17.52■□□□□ 0.39
NPC1-214ENST00000593280 ZNF644Q9H582 1327 aaPredicted RBP17.51■□□□□ 0.39
NPC1-214ENST00000593280 RIMBP3CA6NJZ7 1639 aa17.51■□□□□ 0.39
NPC1-214ENST00000593280 RIMBP3BA6NNM3 1639 aa17.51■□□□□ 0.39
NPC1-214ENST00000593280 PREX2Q70Z35 1606 aa17.51■□□□□ 0.39
NPC1-214ENST00000593280 RIMBP3Q9UFD9 1639 aa17.51■□□□□ 0.39
NPC1-214ENST00000593280 ROCK1Q13464 1354 aa17.5■□□□□ 0.39
NPC1-214ENST00000593280 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
NPC1-214ENST00000593280 RRP7BPQ9NSQ0 103 aa17.48■□□□□ 0.39
NPC1-214ENST00000593280 KDM5BQ9UGL1 1544 aa17.48■□□□□ 0.39
NPC1-214ENST00000593280 CDC42BPBQ9Y5S2 1711 aa17.47■□□□□ 0.39
NPC1-214ENST00000593280 TTC37Q6PGP7 1564 aa17.47■□□□□ 0.39
NPC1-214ENST00000593280 KDM6BO15054 1643 aa17.47■□□□□ 0.39
NPC1-214ENST00000593280 MYO5CQ9NQX4 1742 aa17.46■□□□□ 0.38
NPC1-214ENST00000593280 ZNF777Q9ULD5 760 aaPredicted RBP17.45■□□□□ 0.38
NPC1-214ENST00000593280 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.45■□□□□ 0.38
NPC1-214ENST00000593280 ADGRL2O95490 1459 aa17.42■□□□□ 0.38
NPC1-214ENST00000593280 SHANK2Q9UPX8 1470 aa17.42■□□□□ 0.38
NPC1-214ENST00000593280 ARHGEF5Q12774 1597 aa17.42■□□□□ 0.38
NPC1-214ENST00000593280 SAMD9LQ8IVG5 1584 aa17.42■□□□□ 0.38
NPC1-214ENST00000593280 ACIN1Q9UKV3 1341 aaKnown RBP17.4■□□□□ 0.38
NPC1-214ENST00000593280 ARHGAP5Q13017 1502 aa17.39■□□□□ 0.37
NPC1-214ENST00000593280 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
NPC1-214ENST00000593280 NCOA1Q15788 1441 aa17.37■□□□□ 0.37
NPC1-214ENST00000593280 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
NPC1-214ENST00000593280 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
NPC1-214ENST00000593280 CCDC141Q6ZP82 1450 aa17.34■□□□□ 0.37
NPC1-214ENST00000593280 MBD5Q9P267 1494 aa17.34■□□□□ 0.37
NPC1-214ENST00000593280 TRIM52Q96A61 297 aa17.34■□□□□ 0.37
NPC1-214ENST00000593280 SIN3AQ96ST3 1273 aa17.34■□□□□ 0.37
NPC1-214ENST00000593280 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.37
NPC1-214ENST00000593280 PLEKHH2Q8IVE3 1493 aa17.33■□□□□ 0.36
NPC1-214ENST00000593280 WDR7Q9Y4E6 1490 aa17.33■□□□□ 0.36
NPC1-214ENST00000593280 NEUROD1Q13562 356 aa17.32■□□□□ 0.36
NPC1-214ENST00000593280 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
NPC1-214ENST00000593280 TIMELESSQ9UNS1 1208 aa17.32■□□□□ 0.36
NPC1-214ENST00000593280 DENND4BO75064 1496 aaPredicted RBP17.31■□□□□ 0.36
NPC1-214ENST00000593280 MAST1Q9Y2H9 1570 aa17.3■□□□□ 0.36
NPC1-214ENST00000593280 PLCH2O75038 1416 aa17.3■□□□□ 0.36
NPC1-214ENST00000593280 TSPY4P0CV99 314 aa17.29■□□□□ 0.36
NPC1-214ENST00000593280 TSPY10P0CW01 314 aa17.29■□□□□ 0.36
NPC1-214ENST00000593280 HNRNPMP52272 730 aaKnown RBP eCLIP17.29■□□□□ 0.36
NPC1-214ENST00000593280 ARAP3Q8WWN8 1544 aa17.29■□□□□ 0.36
NPC1-214ENST00000593280 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
NPC1-214ENST00000593280 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
NPC1-214ENST00000593280 ANKRD50Q9ULJ7 1429 aa17.27■□□□□ 0.36
NPC1-214ENST00000593280 DIEXFQ68CQ4 756 aaKnown RBP17.27■□□□□ 0.36
NPC1-214ENST00000593280 MPHOSPH9Q99550 1183 aa17.27■□□□□ 0.36
NPC1-214ENST00000593280 ABCA9Q8IUA7 1624 aa17.27■□□□□ 0.35
NPC1-214ENST00000593280 ABCC1P33527 1531 aa17.26■□□□□ 0.35
NPC1-214ENST00000593280 TONSLQ96HA7 1378 aa17.26■□□□□ 0.35
NPC1-214ENST00000593280 PLXNC1O60486 1568 aa17.24■□□□□ 0.35
NPC1-214ENST00000593280 KIF15Q9NS87 1388 aa17.24■□□□□ 0.35
NPC1-214ENST00000593280 ASXL2Q76L83 1435 aa17.24■□□□□ 0.35
NPC1-214ENST00000593280 PZPP20742 1482 aa17.23■□□□□ 0.35
NPC1-214ENST00000593280 EFCAB2Q5VUJ9 269 aa17.22■□□□□ 0.35
NPC1-214ENST00000593280 CYB5RLQ6IPT4 315 aa17.21■□□□□ 0.35
NPC1-214ENST00000593280 ARHGEF12Q9NZN5 1544 aa17.21■□□□□ 0.35
NPC1-214ENST00000593280 KDM5DQ9BY66 1539 aa17.21■□□□□ 0.35
NPC1-214ENST00000593280 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
NPC1-214ENST00000593280 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
NPC1-214ENST00000593280 PPP1R15AO75807 674 aaPredicted RBP17.18■□□□□ 0.34
NPC1-214ENST00000593280 ANKRD30BQ9BXX2 1392 aa17.17■□□□□ 0.34
NPC1-214ENST00000593280 FANCAO15360 1455 aa17.16■□□□□ 0.34
NPC1-214ENST00000593280 FOXD1Q16676 465 aa17.15■□□□□ 0.34
NPC1-214ENST00000593280 UNC13BO14795 1591 aa17.15■□□□□ 0.34
NPC1-214ENST00000593280 DUOX2Q9NRD8 1548 aa17.15■□□□□ 0.34
NPC1-214ENST00000593280 RPRD2Q5VT52 1461 aaKnown RBP17.14■□□□□ 0.33
NPC1-214ENST00000593280 TRAPPC8Q9Y2L5 1435 aa17.14■□□□□ 0.33
NPC1-214ENST00000593280 NUP155O75694 1391 aa17.13■□□□□ 0.33
NPC1-214ENST00000593280 CFAP74Q9C0B2 1584 aa17.12■□□□□ 0.33
NPC1-214ENST00000593280 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
NPC1-214ENST00000593280 ERBINQ96RT1 1412 aa17.1■□□□□ 0.33
NPC1-214ENST00000593280 ADGRL1O94910 1474 aa17.1■□□□□ 0.33
NPC1-214ENST00000593280 FAM135AQ9P2D6 1515 aa17.1■□□□□ 0.33
NPC1-214ENST00000593280 INO80Q9ULG1 1556 aaPredicted RBP17.09■□□□□ 0.33
NPC1-214ENST00000593280 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
NPC1-214ENST00000593280 PKD2Q13563 968 aa17.09■□□□□ 0.33
NPC1-214ENST00000593280 RTEL1-TNFRSF6BF6WH68 1400 aa17.09■□□□□ 0.33
NPC1-214ENST00000593280 IQGAP3Q86VI3 1631 aa17.08■□□□□ 0.32
NPC1-214ENST00000593280 TEX14Q8IWB6 1497 aa17.07■□□□□ 0.32
NPC1-214ENST00000593280 SPAG9O60271 1321 aaKnown RBP17.06■□□□□ 0.32
NPC1-214ENST00000593280 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
NPC1-214ENST00000593280 MAGI2Q86UL8 1455 aa17.06■□□□□ 0.32
NPC1-214ENST00000593280 CD109Q6YHK3 1445 aa17.05■□□□□ 0.32
NPC1-214ENST00000593280 SCAPERQ9BY12 1400 aa17.05■□□□□ 0.32
NPC1-214ENST00000593280 AFAP1Q8N556 730 aa17.03■□□□□ 0.32
NPC1-214ENST00000593280 L3MBTL2Q969R5 705 aa17.02■□□□□ 0.31
NPC1-214ENST00000593280 ZNF518AQ6AHZ1 1483 aa17■□□□□ 0.31
NPC1-214ENST00000593280 DEPDC5O75140 1603 aa16.99■□□□□ 0.31
NPC1-214ENST00000593280 EIF2AK4Q9P2K8 1649 aaKnown RBP16.99■□□□□ 0.31
NPC1-214ENST00000593280 MAP3K4Q9Y6R4 1608 aa16.99■□□□□ 0.31
NPC1-214ENST00000593280 KIDINS220Q9ULH0 1771 aa16.98■□□□□ 0.31
NPC1-214ENST00000593280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.31
NPC1-214ENST00000593280 KDM5CP41229 1560 aa16.97■□□□□ 0.31
NPC1-214ENST00000593280 NEO1Q92859 1461 aa16.96■□□□□ 0.31
NPC1-214ENST00000593280 POGZQ7Z3K3 1410 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms