RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 TDRD9Q8NDG6 1382 aaKnown RBP24.55■■□□□ 1.52
SPC24-206ENST00000592540 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
SPC24-206ENST00000592540 RPRD2Q5VT52 1461 aaKnown RBP24.54■■□□□ 1.52
SPC24-206ENST00000592540 NBPF8Q3BBV2 869 aa24.53■■□□□ 1.52
SPC24-206ENST00000592540 URB2Q14146 1524 aaKnown RBP24.53■■□□□ 1.52
SPC24-206ENST00000592540 MIA2Q96PC5 1412 aa24.53■■□□□ 1.52
SPC24-206ENST00000592540 KIF7Q2M1P5 1343 aa24.52■■□□□ 1.52
SPC24-206ENST00000592540 SPATA31E1Q6ZUB1 1445 aa24.52■■□□□ 1.52
SPC24-206ENST00000592540 LAMC3Q9Y6N6 1575 aa24.51■■□□□ 1.51
SPC24-206ENST00000592540 TEX14Q8IWB6 1497 aa24.51■■□□□ 1.51
SPC24-206ENST00000592540 ANKRD30BQ9BXX2 1392 aa24.51■■□□□ 1.51
SPC24-206ENST00000592540 EPRSP07814 1512 aaKnown RBP24.48■■□□□ 1.51
SPC24-206ENST00000592540 SMG6Q86US8 1419 aaKnown RBP24.48■■□□□ 1.51
SPC24-206ENST00000592540 DEKP35659 375 aaKnown RBP24.47■■□□□ 1.51
SPC24-206ENST00000592540 NOP58Q9Y2X3 529 aaKnown RBP24.47■■□□□ 1.51
SPC24-206ENST00000592540 CDK13Q14004 1512 aaKnown RBP24.42■■□□□ 1.5
SPC24-206ENST00000592540 ROCK1Q13464 1354 aa24.41■■□□□ 1.5
SPC24-206ENST00000592540 DAPK1P53355 1430 aa24.4■■□□□ 1.5
SPC24-206ENST00000592540 RNF123Q5XPI4 1314 aa24.4■■□□□ 1.5
SPC24-206ENST00000592540 NUDCQ9Y266 331 aa24.39■■□□□ 1.5
SPC24-206ENST00000592540 PAK3O75914 559 aaPredicted RBP24.39■■□□□ 1.49
SPC24-206ENST00000592540 DHX29Q7Z478 1369 aaKnown RBP24.38■■□□□ 1.49
SPC24-206ENST00000592540 DNMT1P26358 1616 aaKnown RBP24.38■■□□□ 1.49
SPC24-206ENST00000592540 WDR62O43379 1518 aa24.37■■□□□ 1.49
SPC24-206ENST00000592540 IQGAP2Q13576 1575 aa24.35■■□□□ 1.49
SPC24-206ENST00000592540 SLC4A1APQ9BWU0 796 aaKnown RBP24.35■■□□□ 1.49
SPC24-206ENST00000592540 CCDC136Q96JN2 1154 aa24.34■■□□□ 1.49
SPC24-206ENST00000592540 ABCC5O15440 1437 aa24.34■■□□□ 1.49
SPC24-206ENST00000592540 BCORL1Q5H9F3 1711 aa24.33■■□□□ 1.49
SPC24-206ENST00000592540 NBR1Q14596 966 aa24.32■■□□□ 1.48
SPC24-206ENST00000592540 TARBP1Q13395 1621 aaKnown RBP24.29■■□□□ 1.48
SPC24-206ENST00000592540 ARID3CA6NKF2 412 aa24.29■■□□□ 1.48
SPC24-206ENST00000592540 MBD5Q9P267 1494 aa24.28■■□□□ 1.48
SPC24-206ENST00000592540 ANP32AP39687 249 aaKnown RBP24.28■■□□□ 1.48
SPC24-206ENST00000592540 IPO9Q96P70 1041 aaKnown RBP24.28■■□□□ 1.48
SPC24-206ENST00000592540 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
SPC24-206ENST00000592540 PZPP20742 1482 aa24.26■■□□□ 1.47
SPC24-206ENST00000592540 CNGB1Q14028 1251 aaPredicted RBP24.26■■□□□ 1.47
SPC24-206ENST00000592540 USP47Q96K76 1375 aa24.26■■□□□ 1.47
SPC24-206ENST00000592540 ZNF644Q9H582 1327 aaPredicted RBP24.24■■□□□ 1.47
SPC24-206ENST00000592540 KIF14Q15058 1648 aa24.23■■□□□ 1.47
SPC24-206ENST00000592540 KDM5CP41229 1560 aa24.23■■□□□ 1.47
SPC24-206ENST00000592540 POLR3GLQ9BT43 218 aa24.23■■□□□ 1.47
SPC24-206ENST00000592540 ARID4BQ4LE39 1312 aaPredicted RBP24.23■■□□□ 1.47
SPC24-206ENST00000592540 PNISRQ8TF01 805 aaKnown RBP24.22■■□□□ 1.47
SPC24-206ENST00000592540 ZBTB47Q9UFB7 747 aaPredicted RBP24.19■■□□□ 1.46
SPC24-206ENST00000592540 PDS5BQ9NTI5 1447 aa24.19■■□□□ 1.46
SPC24-206ENST00000592540 ADAMTS12P58397 1594 aa24.19■■□□□ 1.46
SPC24-206ENST00000592540 ADGBQ8N7X0 1667 aa24.17■■□□□ 1.46
SPC24-206ENST00000592540 KIAA1107Q9UPP5 1409 aa24.17■■□□□ 1.46
SPC24-206ENST00000592540 SENP3-EIF4A1A0A087X0R7 540 aa24.16■■□□□ 1.46
SPC24-206ENST00000592540 TMC1Q8TDI8 760 aa24.16■■□□□ 1.46
SPC24-206ENST00000592540 ZNF326Q5BKZ1 582 aaKnown RBP24.16■■□□□ 1.46
SPC24-206ENST00000592540 ROCK2O75116 1388 aaKnown RBP24.15■■□□□ 1.46
SPC24-206ENST00000592540 RTL5Q5HYW3 569 aaPredicted RBP24.12■■□□□ 1.45
SPC24-206ENST00000592540 LRPPRCP42704 1394 aaKnown RBP24.12■■□□□ 1.45
SPC24-206ENST00000592540 NUP153P49790 1475 aaKnown RBP24.11■■□□□ 1.45
SPC24-206ENST00000592540 CAMSAP2Q08AD1 1489 aa24.09■■□□□ 1.45
SPC24-206ENST00000592540 KIF15Q9NS87 1388 aa24.09■■□□□ 1.45
SPC24-206ENST00000592540 RALGAPBQ86X10 1494 aa24.09■■□□□ 1.45
SPC24-206ENST00000592540 RAPGEF6Q8TEU7 1601 aa24.08■■□□□ 1.45
SPC24-206ENST00000592540 UHRF1BP1Q6BDS2 1440 aa24.08■■□□□ 1.45
SPC24-206ENST00000592540 KIAA0556O60303 1618 aa24.08■■□□□ 1.45
SPC24-206ENST00000592540 PKD2Q13563 968 aa24.07■■□□□ 1.44
SPC24-206ENST00000592540 BRD4O60885 1362 aaPredicted RBP24.07■■□□□ 1.44
SPC24-206ENST00000592540 CROCC2H7BZ55 1655 aa24.06■■□□□ 1.44
SPC24-206ENST00000592540 ITSN2Q9NZM3 1697 aa24.06■■□□□ 1.44
SPC24-206ENST00000592540 RRP1P56182 461 aaKnown RBP24.06■■□□□ 1.44
SPC24-206ENST00000592540 ADGRL2O95490 1459 aa24.06■■□□□ 1.44
SPC24-206ENST00000592540 DISP1Q96F81 1524 aa24.05■■□□□ 1.44
SPC24-206ENST00000592540 MYBBP1AQ9BQG0 1328 aaKnown RBP24.04■■□□□ 1.44
SPC24-206ENST00000592540 KTN1Q86UP2 1357 aaKnown RBP24.03■■□□□ 1.44
SPC24-206ENST00000592540 TCERG1O14776 1098 aaKnown RBP24.02■■□□□ 1.44
SPC24-206ENST00000592540 EXOC6Q8TAG9 804 aa24.02■■□□□ 1.44
SPC24-206ENST00000592540 CARD11Q9BXL7 1154 aa24.02■■□□□ 1.44
SPC24-206ENST00000592540 CFDP1Q9UEE9 299 aaPredicted RBP24.02■■□□□ 1.44
SPC24-206ENST00000592540 E9PCH4 1651 aa24.02■■□□□ 1.44
SPC24-206ENST00000592540 RALBP1Q15311 655 aa24.01■■□□□ 1.43
SPC24-206ENST00000592540 TROQ12816 1431 aaPredicted RBP24■■□□□ 1.43
SPC24-206ENST00000592540 PRG4Q92954 1404 aaPredicted RBP23.99■■□□□ 1.43
SPC24-206ENST00000592540 ARHGEF12Q9NZN5 1544 aa23.99■■□□□ 1.43
SPC24-206ENST00000592540 RCAN3Q9UKA8 241 aa23.99■■□□□ 1.43
SPC24-206ENST00000592540 GPATCH8Q9UKJ3 1502 aaKnown RBP23.98■■□□□ 1.43
SPC24-206ENST00000592540 NPM2Q86SE8 214 aaKnown RBP23.98■■□□□ 1.43
SPC24-206ENST00000592540 KIAA0586Q9BVV6 1533 aa23.97■■□□□ 1.43
SPC24-206ENST00000592540 ANKRD30AQ9BXX3 1397 aa23.97■■□□□ 1.43
SPC24-206ENST00000592540 PDE4AP27815 886 aa23.96■■□□□ 1.43
SPC24-206ENST00000592540 ST20-MTHFSA0A0A6YYL1 179 aa23.96■■□□□ 1.43
SPC24-206ENST00000592540 ANKRD50Q9ULJ7 1429 aa23.95■■□□□ 1.43
SPC24-206ENST00000592540 ADCY10Q96PN6 1610 aa23.94■■□□□ 1.42
SPC24-206ENST00000592540 ZNF777Q9ULD5 760 aaPredicted RBP23.94■■□□□ 1.42
SPC24-206ENST00000592540 BACH2Q9BYV9 841 aa23.93■■□□□ 1.42
SPC24-206ENST00000592540 MS4A1P11836 297 aa23.92■■□□□ 1.42
SPC24-206ENST00000592540 PDE3BQ13370 1112 aa23.92■■□□□ 1.42
SPC24-206ENST00000592540 NUP155O75694 1391 aa23.9■■□□□ 1.42
SPC24-206ENST00000592540 SALL2Q9Y467 1007 aaPredicted RBP23.89■■□□□ 1.41
SPC24-206ENST00000592540 NLRP13Q86W25 1043 aa23.88■■□□□ 1.41
SPC24-206ENST00000592540 KDM2AQ9Y2K7 1162 aa23.88■■□□□ 1.41
SPC24-206ENST00000592540 CEP170Q5SW79 1584 aa23.88■■□□□ 1.41
SPC24-206ENST00000592540 USP35Q9P2H5 1018 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms