RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 FHOD3Q2V2M9 1422 aa16.35■□□□□ 0.21
SMARCA4-218ENST00000592158 NCKAP5LQ9HCH0 1330 aa16.34■□□□□ 0.21
SMARCA4-218ENST00000592158 CAMSAP1Q5T5Y3 1602 aa16.34■□□□□ 0.21
SMARCA4-218ENST00000592158 UPF1Q92900 1129 aaKnown RBP eCLIP16.33■□□□□ 0.2
SMARCA4-218ENST00000592158 ZMYM4Q5VZL5 1548 aa16.31■□□□□ 0.2
SMARCA4-218ENST00000592158 UGGT2Q9NYU1 1516 aa16.31■□□□□ 0.2
SMARCA4-218ENST00000592158 ABCA8O94911 1581 aa16.3■□□□□ 0.2
SMARCA4-218ENST00000592158 C3P01024 1663 aa16.27■□□□□ 0.2
SMARCA4-218ENST00000592158 CARMIL1Q5VZK9 1371 aa16.27■□□□□ 0.2
SMARCA4-218ENST00000592158 MAGI2Q86UL8 1455 aa16.27■□□□□ 0.19
SMARCA4-218ENST00000592158 TRAPPC8Q9Y2L5 1435 aa16.26■□□□□ 0.19
SMARCA4-218ENST00000592158 ARID3CA6NKF2 412 aa16.25■□□□□ 0.19
SMARCA4-218ENST00000592158 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
SMARCA4-218ENST00000592158 PTPRKQ15262 1439 aa16.22■□□□□ 0.19
SMARCA4-218ENST00000592158 HECW1Q76N89 1606 aa16.22■□□□□ 0.19
SMARCA4-218ENST00000592158 PKD2Q13563 968 aa16.21■□□□□ 0.19
SMARCA4-218ENST00000592158 ATP10AO60312 1499 aa16.21■□□□□ 0.19
SMARCA4-218ENST00000592158 C9orf84Q5VXU9 1444 aa16.2■□□□□ 0.18
SMARCA4-218ENST00000592158 KIF27Q86VH2 1401 aa16.2■□□□□ 0.18
SMARCA4-218ENST00000592158 PPP6R1Q9UPN7 881 aa16.2■□□□□ 0.18
SMARCA4-218ENST00000592158 CPS1P31327 1500 aa16.19■□□□□ 0.18
SMARCA4-218ENST00000592158 ATP10BO94823 1461 aa16.18■□□□□ 0.18
SMARCA4-218ENST00000592158 IFFO2Q5TF58 517 aa16.16■□□□□ 0.18
SMARCA4-218ENST00000592158 CFAP74Q9C0B2 1584 aa16.14■□□□□ 0.17
SMARCA4-218ENST00000592158 PLA2R1Q13018 1463 aa16.14■□□□□ 0.17
SMARCA4-218ENST00000592158 TCOF1Q13428 1488 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-218ENST00000592158 ESF1Q9H501 851 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-218ENST00000592158 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-218ENST00000592158 SHANK2Q9UPX8 1470 aa16.1■□□□□ 0.17
SMARCA4-218ENST00000592158 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
SMARCA4-218ENST00000592158 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
SMARCA4-218ENST00000592158 TRIM52Q96A61 297 aa16.04■□□□□ 0.16
SMARCA4-218ENST00000592158 NPATQ14207 1427 aa16.03■□□□□ 0.16
SMARCA4-218ENST00000592158 SCAPERQ9BY12 1400 aa16.02■□□□□ 0.16
SMARCA4-218ENST00000592158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-218ENST00000592158 HNRNPUL2Q1KMD3 747 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-218ENST00000592158 ZNF142P52746 1687 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-218ENST00000592158 CNTLNQ9NXG0 1405 aa15.98■□□□□ 0.15
SMARCA4-218ENST00000592158 CEP170BQ9Y4F5 1589 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-218ENST00000592158 MYO3AQ8NEV4 1616 aa15.97■□□□□ 0.15
SMARCA4-218ENST00000592158 AGLP35573 1532 aa15.96■□□□□ 0.15
SMARCA4-218ENST00000592158 FAM9AQ8IZU1 332 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-218ENST00000592158 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-218ENST00000592158 RNF17Q9BXT8 1623 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-218ENST00000592158 LRRC7Q96NW7 1537 aa15.95■□□□□ 0.14
SMARCA4-218ENST00000592158 VWDEQ8N2E2 1590 aa15.95■□□□□ 0.14
SMARCA4-218ENST00000592158 ZRANB1Q9UGI0 708 aa15.94■□□□□ 0.14
SMARCA4-218ENST00000592158 SETBP1Q9Y6X0 1596 aa15.94■□□□□ 0.14
SMARCA4-218ENST00000592158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.94■□□□□ 0.144e-7■■□□□ 14.3
SMARCA4-218ENST00000592158 POLR1AO95602 1720 aaPredicted RBP15.92■□□□□ 0.14
SMARCA4-218ENST00000592158 MYT1LQ9UL68 1186 aa15.92■□□□□ 0.14
SMARCA4-218ENST00000592158 REREQ9P2R6 1566 aa15.92■□□□□ 0.14
SMARCA4-218ENST00000592158 NEURL4Q96JN8 1562 aa15.91■□□□□ 0.14
SMARCA4-218ENST00000592158 DIP2CQ9Y2E4 1556 aa15.91■□□□□ 0.14
SMARCA4-218ENST00000592158 ZMYM3Q14202 1370 aa15.9■□□□□ 0.14
SMARCA4-218ENST00000592158 MROH2AA6NES4 1674 aa15.9■□□□□ 0.14
SMARCA4-218ENST00000592158 CTTNBP2Q8WZ74 1663 aa15.89■□□□□ 0.13
SMARCA4-218ENST00000592158 FOXD1Q16676 465 aa15.88■□□□□ 0.13
SMARCA4-218ENST00000592158 PLEKHD1A6NEE1 506 aa15.86■□□□□ 0.13
SMARCA4-218ENST00000592158 ZNF772Q68DY9 489 aaPredicted RBP15.85■□□□□ 0.13
SMARCA4-218ENST00000592158 P3H3Q8IVL6 736 aa15.85■□□□□ 0.13
SMARCA4-218ENST00000592158 STRCP1A6NGW2 1772 aa15.85■□□□□ 0.13
SMARCA4-218ENST00000592158 RAPGEF6Q8TEU7 1601 aa15.84■□□□□ 0.13
SMARCA4-218ENST00000592158 RXRBP28702 533 aa15.84■□□□□ 0.13
SMARCA4-218ENST00000592158 ZNF518AQ6AHZ1 1483 aa15.84■□□□□ 0.13
SMARCA4-218ENST00000592158 DNMT1P26358 1616 aaKnown RBP15.83■□□□□ 0.13
SMARCA4-218ENST00000592158 ABCA6Q8N139 1617 aa15.83■□□□□ 0.13
SMARCA4-218ENST00000592158 AFAP1Q8N556 730 aa15.83■□□□□ 0.12
SMARCA4-218ENST00000592158 FAM135BQ49AJ0 1406 aa15.83■□□□□ 0.12
SMARCA4-218ENST00000592158 SYNMO15061 1565 aa15.81■□□□□ 0.12
SMARCA4-218ENST00000592158 PLCH2O75038 1416 aa15.81■□□□□ 0.12
SMARCA4-218ENST00000592158 KDM5CP41229 1560 aa15.81■□□□□ 0.12
SMARCA4-218ENST00000592158 A2ML1A8K2U0 1454 aa15.8■□□□□ 0.12
SMARCA4-218ENST00000592158 CDK12Q9NYV4 1490 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-218ENST00000592158 ANKLE2Q86XL3 938 aa15.77■□□□□ 0.12
SMARCA4-218ENST00000592158 NUP153P49790 1475 aaKnown RBP15.77■□□□□ 0.11
SMARCA4-218ENST00000592158 EFCAB2Q5VUJ9 269 aa15.76■□□□□ 0.11
SMARCA4-218ENST00000592158 MEX3CQ5U5Q3 659 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-218ENST00000592158 CLTCQ00610 1675 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-218ENST00000592158 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
SMARCA4-218ENST00000592158 JCADQ9P266 1359 aa15.74■□□□□ 0.11
SMARCA4-218ENST00000592158 CDK13Q14004 1512 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-218ENST00000592158 ROBO1Q9Y6N7 1651 aa15.73■□□□□ 0.11
SMARCA4-218ENST00000592158 MLH3Q9UHC1 1453 aa15.72■□□□□ 0.11
SMARCA4-218ENST00000592158 NUTM2BA6NNL0 878 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-218ENST00000592158 NUTM2EB1AL46 878 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-218ENST00000592158 NUTM2DQ5VT03 806 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-218ENST00000592158 NUTM2AQ8IVF1 878 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-218ENST00000592158 LRP6O75581 1613 aa15.71■□□□□ 0.11
SMARCA4-218ENST00000592158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.71■□□□□ 0.11
SMARCA4-218ENST00000592158 MED14O60244 1454 aa15.71■□□□□ 0.1
SMARCA4-218ENST00000592158 XIRP1Q702N8 1843 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-218ENST00000592158 YY1P25490 414 aa15.69■□□□□ 0.1
SMARCA4-218ENST00000592158 IQGAP1P46940 1657 aa15.69■□□□□ 0.1
SMARCA4-218ENST00000592158 LRP5O75197 1615 aa15.68■□□□□ 0.1
SMARCA4-218ENST00000592158 DEPDC5O75140 1603 aa15.67■□□□□ 0.1
SMARCA4-218ENST00000592158 RGS12O14924 1447 aa15.67■□□□□ 0.1
SMARCA4-218ENST00000592158 PHLPP1O60346 1717 aa15.66■□□□□ 0.1
SMARCA4-218ENST00000592158 MYO5CQ9NQX4 1742 aa15.66■□□□□ 0.1
SMARCA4-218ENST00000592158 ABCC1P33527 1531 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms