RNA–Protein interactions for RNA: ENST00000591470.5

GCDH-216, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-216ENST00000591470 CAMSAP2Q08AD1 1489 aa27.14■■□□□ 1.94
GCDH-216ENST00000591470 PPP1R15AO75807 674 aaPredicted RBP27.13■■□□□ 1.93
GCDH-216ENST00000591470 DENND4BO75064 1496 aaPredicted RBP27.13■■□□□ 1.93
GCDH-216ENST00000591470 CENPBP07199 599 aaPredicted RBP27.13■■□□□ 1.93
GCDH-216ENST00000591470 ZNF644Q9H582 1327 aaPredicted RBP27.12■■□□□ 1.93
GCDH-216ENST00000591470 PTPRGP23470 1445 aa27.09■■□□□ 1.93
GCDH-216ENST00000591470 ABCC10Q5T3U5 1492 aa27.09■■□□□ 1.93
GCDH-216ENST00000591470 TONSLQ96HA7 1378 aa27.09■■□□□ 1.93
GCDH-216ENST00000591470 CROCC2H7BZ55 1655 aa27.08■■□□□ 1.93
GCDH-216ENST00000591470 ADGBQ8N7X0 1667 aa27.07■■□□□ 1.92
GCDH-216ENST00000591470 CFDP1Q9UEE9 299 aaPredicted RBP27.07■■□□□ 1.92
GCDH-216ENST00000591470 CDC42BPAQ5VT25 1732 aa27.07■■□□□ 1.92
GCDH-216ENST00000591470 SCAF1Q9H7N4 1312 aaKnown RBP27.06■■□□□ 1.92
GCDH-216ENST00000591470 PLEKHD1A6NEE1 506 aa27.06■■□□□ 1.92
GCDH-216ENST00000591470 KDM5BQ9UGL1 1544 aa27.03■■□□□ 1.92
GCDH-216ENST00000591470 ADGRL2O95490 1459 aa27.03■■□□□ 1.92
GCDH-216ENST00000591470 TRIM52Q96A61 297 aa27■■□□□ 1.91
GCDH-216ENST00000591470 MPHOSPH9Q99550 1183 aa26.99■■□□□ 1.91
GCDH-216ENST00000591470 NCOA1Q15788 1441 aa26.97■■□□□ 1.91
GCDH-216ENST00000591470 SHANK2Q9UPX8 1470 aa26.93■■□□□ 1.9
GCDH-216ENST00000591470 CLASP1Q7Z460 1538 aa26.93■■□□□ 1.9
GCDH-216ENST00000591470 ERCC6L2Q5T890 1561 aa26.91■■□□□ 1.9
GCDH-216ENST00000591470 ZNF777Q9ULD5 760 aaPredicted RBP26.9■■□□□ 1.9
GCDH-216ENST00000591470 ABCC2Q92887 1545 aa26.89■■□□□ 1.89
GCDH-216ENST00000591470 PREX2Q70Z35 1606 aa26.87■■□□□ 1.89
GCDH-216ENST00000591470 ARHGEF5Q12774 1597 aa26.87■■□□□ 1.89
GCDH-216ENST00000591470 ANKRD30AQ9BXX3 1397 aa26.87■■□□□ 1.89
GCDH-216ENST00000591470 ANKRD30BQ9BXX2 1392 aa26.87■■□□□ 1.89
GCDH-216ENST00000591470 YTHDC1Q96MU7 727 aaKnown RBP26.87■■□□□ 1.89
GCDH-216ENST00000591470 PZPP20742 1482 aa26.85■■□□□ 1.89
GCDH-216ENST00000591470 CDC42BPBQ9Y5S2 1711 aa26.84■■□□□ 1.89
GCDH-216ENST00000591470 RPRD2Q5VT52 1461 aaKnown RBP26.82■■□□□ 1.88
GCDH-216ENST00000591470 C9orf84Q5VXU9 1444 aa26.81■■□□□ 1.88
GCDH-216ENST00000591470 SAMD9LQ8IVG5 1584 aa26.8■■□□□ 1.88
GCDH-216ENST00000591470 MBD5Q9P267 1494 aa26.79■■□□□ 1.88
GCDH-216ENST00000591470 FOXD1Q16676 465 aa26.77■■□□□ 1.88
GCDH-216ENST00000591470 SLC4A1APQ9BWU0 796 aaKnown RBP26.77■■□□□ 1.88
GCDH-216ENST00000591470 ANKRD50Q9ULJ7 1429 aa26.77■■□□□ 1.88
GCDH-216ENST00000591470 UHRF1BP1LA0JNW5 1464 aa26.76■■□□□ 1.87
GCDH-216ENST00000591470 TTC37Q6PGP7 1564 aa26.76■■□□□ 1.87
GCDH-216ENST00000591470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.75■■□□□ 1.87
GCDH-216ENST00000591470 TEX14Q8IWB6 1497 aa26.74■■□□□ 1.87
GCDH-216ENST00000591470 DDX10Q13206 875 aaKnown RBP26.73■■□□□ 1.87
GCDH-216ENST00000591470 CCDC141Q6ZP82 1450 aa26.73■■□□□ 1.87
GCDH-216ENST00000591470 KDM5DQ9BY66 1539 aa26.72■■□□□ 1.87
GCDH-216ENST00000591470 KIAA1107Q9UPP5 1409 aa26.71■■□□□ 1.87
GCDH-216ENST00000591470 ZCCHC11Q5TAX3 1644 aaKnown RBP26.7■■□□□ 1.87
GCDH-216ENST00000591470 L3MBTL2Q969R5 705 aa26.7■■□□□ 1.87
GCDH-216ENST00000591470 HIRIP3Q9BW71 556 aaPredicted RBP26.7■■□□□ 1.87
GCDH-216ENST00000591470 MYO5CQ9NQX4 1742 aa26.7■■□□□ 1.86
GCDH-216ENST00000591470 TSPY4P0CV99 314 aa26.7■■□□□ 1.86
GCDH-216ENST00000591470 TSPY10P0CW01 314 aa26.7■■□□□ 1.86
GCDH-216ENST00000591470 GTF3C3Q9Y5Q9 886 aa26.7■■□□□ 1.86
GCDH-216ENST00000591470 RSPH4AQ5TD94 716 aa26.68■■□□□ 1.86
GCDH-216ENST00000591470 HNRNPMP52272 730 aaKnown RBP eCLIP26.68■■□□□ 1.86
GCDH-216ENST00000591470 MAST1Q9Y2H9 1570 aa26.68■■□□□ 1.86
GCDH-216ENST00000591470 ARHGAP5Q13017 1502 aa26.66■■□□□ 1.86
GCDH-216ENST00000591470 KIF15Q9NS87 1388 aa26.65■■□□□ 1.86
GCDH-216ENST00000591470 SYCP2Q9BX26 1530 aa26.64■■□□□ 1.85
GCDH-216ENST00000591470 PLEKHH2Q8IVE3 1493 aa26.62■■□□□ 1.85
GCDH-216ENST00000591470 PKD2Q13563 968 aa26.58■■□□□ 1.85
GCDH-216ENST00000591470 NUP155O75694 1391 aa26.58■■□□□ 1.85
GCDH-216ENST00000591470 HSPA5P11021 654 aaKnown RBP26.57■■□□□ 1.84
GCDH-216ENST00000591470 PLXNC1O60486 1568 aa26.56■■□□□ 1.84
GCDH-216ENST00000591470 PLCH2O75038 1416 aa26.56■■□□□ 1.84
GCDH-216ENST00000591470 EIF4G2P78344 907 aaKnown RBP eCLIP26.55■■□□□ 1.84
GCDH-216ENST00000591470 NBPF8Q3BBV2 869 aa26.54■■□□□ 1.84
GCDH-216ENST00000591470 UNC13BO14795 1591 aa26.51■■□□□ 1.83
GCDH-216ENST00000591470 ARHGEF12Q9NZN5 1544 aa26.49■■□□□ 1.83
GCDH-216ENST00000591470 CCER2I3L3R5 266 aa26.49■■□□□ 1.83
GCDH-216ENST00000591470 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
GCDH-216ENST00000591470 ARAP3Q8WWN8 1544 aa26.48■■□□□ 1.83
GCDH-216ENST00000591470 ANP32CO43423 234 aa26.48■■□□□ 1.83
GCDH-216ENST00000591470 KCNH8Q96L42 1107 aa26.48■■□□□ 1.83
GCDH-216ENST00000591470 ABCC1P33527 1531 aa26.48■■□□□ 1.83
GCDH-216ENST00000591470 FAM135AQ9P2D6 1515 aa26.48■■□□□ 1.83
GCDH-216ENST00000591470 WASHC2AQ641Q2 1341 aa26.47■■□□□ 1.83
GCDH-216ENST00000591470 SPATA31E1Q6ZUB1 1445 aa26.46■■□□□ 1.83
GCDH-216ENST00000591470 EFCAB2Q5VUJ9 269 aa26.43■■□□□ 1.82
GCDH-216ENST00000591470 DUOX2Q9NRD8 1548 aa26.43■■□□□ 1.82
GCDH-216ENST00000591470 POLR1AO95602 1720 aaPredicted RBP26.42■■□□□ 1.82
GCDH-216ENST00000591470 UHRF1BP1Q6BDS2 1440 aa26.41■■□□□ 1.82
GCDH-216ENST00000591470 WDR7Q9Y4E6 1490 aa26.4■■□□□ 1.82
GCDH-216ENST00000591470 IQGAP3Q86VI3 1631 aa26.39■■□□□ 1.82
GCDH-216ENST00000591470 ERBINQ96RT1 1412 aa26.38■■□□□ 1.81
GCDH-216ENST00000591470 MAGI2Q86UL8 1455 aa26.37■■□□□ 1.81
GCDH-216ENST00000591470 CCDC7Q96M83 1385 aa26.37■■□□□ 1.81
GCDH-216ENST00000591470 CNTLNQ9NXG0 1405 aa26.35■■□□□ 1.81
GCDH-216ENST00000591470 ABCA9Q8IUA7 1624 aa26.34■■□□□ 1.81
GCDH-216ENST00000591470 TRAPPC8Q9Y2L5 1435 aa26.34■■□□□ 1.81
GCDH-216ENST00000591470 RALGAPBQ86X10 1494 aa26.33■■□□□ 1.81
GCDH-216ENST00000591470 C11orf95C9JLR9 678 aaPredicted RBP26.32■■□□□ 1.8
GCDH-216ENST00000591470 RTEL1-TNFRSF6BF6WH68 1400 aa26.3■■□□□ 1.8
GCDH-216ENST00000591470 KDM5CP41229 1560 aa26.3■■□□□ 1.8
GCDH-216ENST00000591470 ZFYVE16Q7Z3T8 1539 aa26.27■■□□□ 1.8
GCDH-216ENST00000591470 PLA2R1Q13018 1463 aa26.26■■□□□ 1.79
GCDH-216ENST00000591470 USP47Q96K76 1375 aa26.25■■□□□ 1.79
GCDH-216ENST00000591470 CCDC144AA2RUR9 1427 aa26.24■■□□□ 1.79
GCDH-216ENST00000591470 ATP10AO60312 1499 aa26.24■■□□□ 1.79
GCDH-216ENST00000591470 KIF7Q2M1P5 1343 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms