RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 MLECQ14165 292 aa18.08■□□□□ 0.48
GFAP-217ENST00000590922 CERKQ8TCT0 537 aa18.07■□□□□ 0.48
GFAP-217ENST00000590922 SCAPERQ9BY12 1400 aa18.06■□□□□ 0.48
GFAP-217ENST00000590922 CDK13Q14004 1512 aaKnown RBP18.06■□□□□ 0.48
GFAP-217ENST00000590922 PLCH2O75038 1416 aa18.06■□□□□ 0.48
GFAP-217ENST00000590922 ATP10AO60312 1499 aa18.03■□□□□ 0.48
GFAP-217ENST00000590922 ARHGEF12Q9NZN5 1544 aa18.03■□□□□ 0.48
GFAP-217ENST00000590922 C9orf84Q5VXU9 1444 aa18.01■□□□□ 0.47
GFAP-217ENST00000590922 PREX1Q8TCU6 1659 aa18.01■□□□□ 0.47
GFAP-217ENST00000590922 MYO5CQ9NQX4 1742 aa18.01■□□□□ 0.47
GFAP-217ENST00000590922 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
GFAP-217ENST00000590922 EFCAB2Q5VUJ9 269 aa17.99■□□□□ 0.47
GFAP-217ENST00000590922 CDK11AQ9UQ88 783 aaPredicted RBP17.96■□□□□ 0.47
GFAP-217ENST00000590922 ZNF518AQ6AHZ1 1483 aa17.95■□□□□ 0.46
GFAP-217ENST00000590922 CEBPAP49715 358 aaPredicted RBP17.95■□□□□ 0.46
GFAP-217ENST00000590922 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
GFAP-217ENST00000590922 FMN1Q68DA7 1419 aa17.95■□□□□ 0.46
GFAP-217ENST00000590922 SETD1BQ9UPS6 1966 aaKnown RBP17.95■□□□□ 0.46
GFAP-217ENST00000590922 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
GFAP-217ENST00000590922 STRCQ7RTU9 1775 aa17.94■□□□□ 0.46
GFAP-217ENST00000590922 KIF14Q15058 1648 aa17.93■□□□□ 0.46
GFAP-217ENST00000590922 KDM5CP41229 1560 aa17.92■□□□□ 0.46
GFAP-217ENST00000590922 UHRF1BP1Q6BDS2 1440 aa17.91■□□□□ 0.46
GFAP-217ENST00000590922 AFAP1Q8N556 730 aa17.91■□□□□ 0.46
GFAP-217ENST00000590922 ARHGAP5Q13017 1502 aa17.91■□□□□ 0.46
GFAP-217ENST00000590922 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.46
GFAP-217ENST00000590922 MYT1LQ9UL68 1186 aa17.89■□□□□ 0.45
GFAP-217ENST00000590922 DIP2CQ9Y2E4 1556 aa17.88■□□□□ 0.45
GFAP-217ENST00000590922 CLIP1P30622 1438 aa17.88■□□□□ 0.45
GFAP-217ENST00000590922 ARHGAP35Q9NRY4 1499 aa17.88■□□□□ 0.45
GFAP-217ENST00000590922 REREQ9P2R6 1566 aa17.87■□□□□ 0.45
GFAP-217ENST00000590922 DISP3Q9P2K9 1392 aa17.86■□□□□ 0.45
GFAP-217ENST00000590922 C3P01024 1663 aa17.85■□□□□ 0.45
GFAP-217ENST00000590922 CDC42BPBQ9Y5S2 1711 aa17.84■□□□□ 0.45
GFAP-217ENST00000590922 ABCA6Q8N139 1617 aa17.84■□□□□ 0.45
GFAP-217ENST00000590922 MLH3Q9UHC1 1453 aa17.84■□□□□ 0.45
GFAP-217ENST00000590922 PTPRTO14522 1441 aa17.83■□□□□ 0.45
GFAP-217ENST00000590922 LRRIQ1Q96JM4 1722 aa17.83■□□□□ 0.44
GFAP-217ENST00000590922 ESF1Q9H501 851 aaKnown RBP17.82■□□□□ 0.44
GFAP-217ENST00000590922 AGLP35573 1532 aa17.82■□□□□ 0.44
GFAP-217ENST00000590922 ILDR2Q71H61 639 aa17.81■□□□□ 0.44
GFAP-217ENST00000590922 TRAPPC8Q9Y2L5 1435 aa17.8■□□□□ 0.44
GFAP-217ENST00000590922 PREX2Q70Z35 1606 aa17.8■□□□□ 0.44
GFAP-217ENST00000590922 ABCC1P33527 1531 aa17.79■□□□□ 0.44
GFAP-217ENST00000590922 SOCS7O14512 581 aa17.79■□□□□ 0.44
GFAP-217ENST00000590922 ITSN2Q9NZM3 1697 aa17.77■□□□□ 0.44
GFAP-217ENST00000590922 CNTLNQ9NXG0 1405 aa17.76■□□□□ 0.43
GFAP-217ENST00000590922 KIDINS220Q9ULH0 1771 aa17.76■□□□□ 0.43
GFAP-217ENST00000590922 LTBP4Q8N2S1 1624 aa17.76■□□□□ 0.43
GFAP-217ENST00000590922 SPATA31D1Q6ZQQ2 1576 aa17.74■□□□□ 0.43
GFAP-217ENST00000590922 NCOA1Q15788 1441 aa17.74■□□□□ 0.43
GFAP-217ENST00000590922 IQSEC2Q5JU85 1478 aa17.74■□□□□ 0.43
GFAP-217ENST00000590922 CCDC18Q5T9S5 1454 aa17.74■□□□□ 0.43
GFAP-217ENST00000590922 CDC42BPAQ5VT25 1732 aa17.72■□□□□ 0.43
GFAP-217ENST00000590922 NPATQ14207 1427 aa17.71■□□□□ 0.43
GFAP-217ENST00000590922 CASKIN1Q8WXD9 1431 aa17.71■□□□□ 0.43
GFAP-217ENST00000590922 MROH2AA6NES4 1674 aa17.71■□□□□ 0.42
GFAP-217ENST00000590922 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
GFAP-217ENST00000590922 CAMSAP1Q5T5Y3 1602 aa17.69■□□□□ 0.42
GFAP-217ENST00000590922 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
GFAP-217ENST00000590922 ZMYM3Q14202 1370 aa17.66■□□□□ 0.42
GFAP-217ENST00000590922 SUPT6HQ7KZ85 1726 aaKnown RBP17.65■□□□□ 0.42
GFAP-217ENST00000590922 ZNF777Q9ULD5 760 aaPredicted RBP17.65■□□□□ 0.42
GFAP-217ENST00000590922 SYCP2Q9BX26 1530 aa17.65■□□□□ 0.42
GFAP-217ENST00000590922 SPAG9O60271 1321 aaKnown RBP17.65■□□□□ 0.42
GFAP-217ENST00000590922 FYCO1Q9BQS8 1478 aa17.63■□□□□ 0.41
GFAP-217ENST00000590922 CLTCQ00610 1675 aaKnown RBP17.62■□□□□ 0.41
GFAP-217ENST00000590922 NCKAP5LQ9HCH0 1330 aa17.62■□□□□ 0.41
GFAP-217ENST00000590922 ATP7AQ04656 1500 aa17.62■□□□□ 0.41
GFAP-217ENST00000590922 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
GFAP-217ENST00000590922 HNRNPMP52272 730 aaKnown RBP eCLIP17.61■□□□□ 0.41
GFAP-217ENST00000590922 ZNF335Q9H4Z2 1342 aaPredicted RBP17.61■□□□□ 0.41
GFAP-217ENST00000590922 GPATCH8Q9UKJ3 1502 aaKnown RBP17.61■□□□□ 0.41
GFAP-217ENST00000590922 MYO3AQ8NEV4 1616 aa17.61■□□□□ 0.41
GFAP-217ENST00000590922 PKD2Q13563 968 aa17.6■□□□□ 0.41
GFAP-217ENST00000590922 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
GFAP-217ENST00000590922 PLA2R1Q13018 1463 aa17.6■□□□□ 0.41
GFAP-217ENST00000590922 PLXNC1O60486 1568 aa17.6■□□□□ 0.41
GFAP-217ENST00000590922 INO80Q9ULG1 1556 aaPredicted RBP17.59■□□□□ 0.41
GFAP-217ENST00000590922 KIAA1107Q9UPP5 1409 aa17.59■□□□□ 0.41
GFAP-217ENST00000590922 CEP170BQ9Y4F5 1589 aaPredicted RBP17.58■□□□□ 0.41
GFAP-217ENST00000590922 A2MP01023 1474 aa17.58■□□□□ 0.41
GFAP-217ENST00000590922 PLEKHH2Q8IVE3 1493 aa17.58■□□□□ 0.41
GFAP-217ENST00000590922 UBAP1LF5GYI3 381 aa17.58■□□□□ 0.4
GFAP-217ENST00000590922 PTPRKQ15262 1439 aa17.57■□□□□ 0.4
GFAP-217ENST00000590922 CFDP1Q9UEE9 299 aaPredicted RBP17.57■□□□□ 0.4
GFAP-217ENST00000590922 TCOF1Q13428 1488 aaKnown RBP17.56■□□□□ 0.4
GFAP-217ENST00000590922 GGT6Q6P531 493 aa17.55■□□□□ 0.4
GFAP-217ENST00000590922 CCNB3Q8WWL7 1395 aa17.54■□□□□ 0.4
GFAP-217ENST00000590922 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
GFAP-217ENST00000590922 ADGBQ8N7X0 1667 aa17.53■□□□□ 0.4
GFAP-217ENST00000590922 A2ML1A8K2U0 1454 aa17.5■□□□□ 0.39
GFAP-217ENST00000590922 DNMT1P26358 1616 aaKnown RBP17.48■□□□□ 0.39
GFAP-217ENST00000590922 MTUS2Q5JR59 1369 aa17.48■□□□□ 0.39
GFAP-217ENST00000590922 POLR1AO95602 1720 aaPredicted RBP17.45■□□□□ 0.38
GFAP-217ENST00000590922 RTEL1-TNFRSF6BF6WH68 1400 aa17.45■□□□□ 0.38
GFAP-217ENST00000590922 ZNF644Q9H582 1327 aaPredicted RBP17.45■□□□□ 0.38
GFAP-217ENST00000590922 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
GFAP-217ENST00000590922 TIAM1Q13009 1591 aa17.44■□□□□ 0.38
GFAP-217ENST00000590922 DHX29Q7Z478 1369 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms