RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 ABCC5O15440 1437 aa29.11■■■□□ 2.25
ZNF554-203ENST00000590116 EIF4G2P78344 907 aaKnown RBP eCLIP29.1■■■□□ 2.25
ZNF554-203ENST00000590116 DNMT1P26358 1616 aaKnown RBP29.08■■■□□ 2.25
ZNF554-203ENST00000590116 RAPGEF6Q8TEU7 1601 aa29.08■■■□□ 2.25
ZNF554-203ENST00000590116 HNRNPUQ00839 825 aaKnown RBP eCLIP29.07■■■□□ 2.24
ZNF554-203ENST00000590116 ROCK1Q13464 1354 aa29.07■■■□□ 2.24
ZNF554-203ENST00000590116 C11orf95C9JLR9 678 aaPredicted RBP29.05■■■□□ 2.24
ZNF554-203ENST00000590116 GRIN2AQ12879 1464 aa29.05■■■□□ 2.24
ZNF554-203ENST00000590116 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
ZNF554-203ENST00000590116 ANKRD30BQ9BXX2 1392 aa29.03■■■□□ 2.24
ZNF554-203ENST00000590116 NBPF8Q3BBV2 869 aa29.02■■■□□ 2.24
ZNF554-203ENST00000590116 PRG4Q92954 1404 aaPredicted RBP29.01■■■□□ 2.23
ZNF554-203ENST00000590116 CDK11AQ9UQ88 783 aaPredicted RBP29■■■□□ 2.23
ZNF554-203ENST00000590116 CCDC184Q52MB2 194 aa29■■■□□ 2.23
ZNF554-203ENST00000590116 SLC4A1APQ9BWU0 796 aaKnown RBP29■■■□□ 2.23
ZNF554-203ENST00000590116 RPRD2Q5VT52 1461 aaKnown RBP28.99■■■□□ 2.23
ZNF554-203ENST00000590116 CNTLNQ9NXG0 1405 aa28.99■■■□□ 2.23
ZNF554-203ENST00000590116 TEX14Q8IWB6 1497 aa28.98■■■□□ 2.23
ZNF554-203ENST00000590116 PLB1Q6P1J6 1458 aa28.95■■■□□ 2.22
ZNF554-203ENST00000590116 CCDC7Q96M83 1385 aa28.94■■■□□ 2.22
ZNF554-203ENST00000590116 NCOA1Q15788 1441 aa28.94■■■□□ 2.22
ZNF554-203ENST00000590116 CAMSAP2Q08AD1 1489 aa28.93■■■□□ 2.22
ZNF554-203ENST00000590116 ZNF777Q9ULD5 760 aaPredicted RBP28.93■■■□□ 2.22
ZNF554-203ENST00000590116 IRX6P78412 446 aaPredicted RBP28.92■■■□□ 2.22
ZNF554-203ENST00000590116 KIF14Q15058 1648 aa28.91■■■□□ 2.22
ZNF554-203ENST00000590116 CEP170Q5SW79 1584 aa28.9■■■□□ 2.22
ZNF554-203ENST00000590116 FBLN2P98095 1184 aa28.9■■■□□ 2.22
ZNF554-203ENST00000590116 TROQ12816 1431 aaPredicted RBP28.9■■■□□ 2.22
ZNF554-203ENST00000590116 CFDP1Q9UEE9 299 aaPredicted RBP28.9■■■□□ 2.22
ZNF554-203ENST00000590116 PZPP20742 1482 aa28.88■■■□□ 2.21
ZNF554-203ENST00000590116 CHMP7Q8WUX9 453 aaPredicted RBP28.86■■■□□ 2.21
ZNF554-203ENST00000590116 GPATCH8Q9UKJ3 1502 aaKnown RBP28.84■■■□□ 2.21
ZNF554-203ENST00000590116 PRKRIP1Q9H875 184 aaPredicted RBP28.84■■■□□ 2.21
ZNF554-203ENST00000590116 ITSN2Q9NZM3 1697 aa28.83■■■□□ 2.21
ZNF554-203ENST00000590116 KIF7Q2M1P5 1343 aa28.83■■■□□ 2.21
ZNF554-203ENST00000590116 FAM9BQ8IZU0 186 aa28.82■■■□□ 2.2
ZNF554-203ENST00000590116 ERCC6Q03468 1493 aa28.82■■■□□ 2.2
ZNF554-203ENST00000590116 ADGBQ8N7X0 1667 aa28.81■■■□□ 2.2
ZNF554-203ENST00000590116 MAGI1Q96QZ7 1491 aaPredicted RBP28.81■■■□□ 2.2
ZNF554-203ENST00000590116 SPATA31E1Q6ZUB1 1445 aa28.8■■■□□ 2.2
ZNF554-203ENST00000590116 ZNF326Q5BKZ1 582 aaKnown RBP28.79■■■□□ 2.2
ZNF554-203ENST00000590116 MRS2Q9HD23 443 aa28.78■■■□□ 2.2
ZNF554-203ENST00000590116 SYNJ2O15056 1496 aa28.78■■■□□ 2.2
ZNF554-203ENST00000590116 CROCC2H7BZ55 1655 aa28.77■■■□□ 2.2
ZNF554-203ENST00000590116 CNGB1Q14028 1251 aaPredicted RBP28.76■■■□□ 2.19
ZNF554-203ENST00000590116 RBM19Q9Y4C8 960 aaKnown RBP28.76■■■□□ 2.19
ZNF554-203ENST00000590116 ADCY10Q96PN6 1610 aa28.75■■■□□ 2.19
ZNF554-203ENST00000590116 POLR1AO95602 1720 aaPredicted RBP28.74■■■□□ 2.19
ZNF554-203ENST00000590116 PKD2Q13563 968 aa28.72■■■□□ 2.19
ZNF554-203ENST00000590116 CARMIL2Q6F5E8 1435 aa28.72■■■□□ 2.19
ZNF554-203ENST00000590116 KIAA1107Q9UPP5 1409 aa28.72■■■□□ 2.19
ZNF554-203ENST00000590116 JPH4Q96JJ6 628 aa28.71■■■□□ 2.19
ZNF554-203ENST00000590116 ADGRL2O95490 1459 aa28.71■■■□□ 2.19
ZNF554-203ENST00000590116 POLR3GLQ9BT43 218 aa28.71■■■□□ 2.19
ZNF554-203ENST00000590116 MBD5Q9P267 1494 aa28.7■■■□□ 2.18
ZNF554-203ENST00000590116 ANKRD30AQ9BXX3 1397 aa28.69■■■□□ 2.18
ZNF554-203ENST00000590116 ANP32EQ9BTT0 268 aa28.66■■■□□ 2.18
ZNF554-203ENST00000590116 BCORL1Q5H9F3 1711 aa28.66■■■□□ 2.18
ZNF554-203ENST00000590116 CDC42BPAQ5VT25 1732 aa28.66■■■□□ 2.18
ZNF554-203ENST00000590116 ANKRD50Q9ULJ7 1429 aa28.66■■■□□ 2.18
ZNF554-203ENST00000590116 USP47Q96K76 1375 aa28.65■■■□□ 2.18
ZNF554-203ENST00000590116 NUP160Q12769 1436 aa28.64■■■□□ 2.18
ZNF554-203ENST00000590116 PLEKHD1A6NEE1 506 aa28.62■■■□□ 2.17
ZNF554-203ENST00000590116 ZBED9Q6R2W3 1325 aa28.58■■■□□ 2.17
ZNF554-203ENST00000590116 C9orf84Q5VXU9 1444 aa28.58■■■□□ 2.17
ZNF554-203ENST00000590116 NUP155O75694 1391 aa28.58■■■□□ 2.17
ZNF554-203ENST00000590116 ATP10BO94823 1461 aa28.58■■■□□ 2.17
ZNF554-203ENST00000590116 ABCA8O94911 1581 aa28.58■■■□□ 2.17
ZNF554-203ENST00000590116 DHX29Q7Z478 1369 aaKnown RBP28.58■■■□□ 2.16
ZNF554-203ENST00000590116 ABCC10Q5T3U5 1492 aa28.57■■■□□ 2.16
ZNF554-203ENST00000590116 KDM5CP41229 1560 aa28.56■■■□□ 2.16
ZNF554-203ENST00000590116 SENP3-EIF4A1A0A087X0R7 540 aa28.53■■■□□ 2.16
ZNF554-203ENST00000590116 HNRNPMP52272 730 aaKnown RBP eCLIP28.52■■■□□ 2.16
ZNF554-203ENST00000590116 SHANK2Q9UPX8 1470 aa28.52■■■□□ 2.16
ZNF554-203ENST00000590116 ERICH6BQ5W0A0 696 aa28.49■■■□□ 2.15
ZNF554-203ENST00000590116 KDM2AQ9Y2K7 1162 aa28.49■■■□□ 2.15
ZNF554-203ENST00000590116 TSPY4P0CV99 314 aa28.48■■■□□ 2.15
ZNF554-203ENST00000590116 TSPY10P0CW01 314 aa28.48■■■□□ 2.15
ZNF554-203ENST00000590116 PPP4R2Q9NY27 417 aa28.46■■■□□ 2.15
ZNF554-203ENST00000590116 KIF15Q9NS87 1388 aa28.46■■■□□ 2.15
ZNF554-203ENST00000590116 CARD11Q9BXL7 1154 aa28.46■■■□□ 2.15
ZNF554-203ENST00000590116 RALGAPBQ86X10 1494 aa28.45■■■□□ 2.15
ZNF554-203ENST00000590116 UHRF1BP1Q6BDS2 1440 aa28.44■■■□□ 2.14
ZNF554-203ENST00000590116 B4GALNT3Q6L9W6 998 aa28.44■■■□□ 2.14
ZNF554-203ENST00000590116 ARID4BQ4LE39 1312 aaPredicted RBP28.41■■■□□ 2.14
ZNF554-203ENST00000590116 KDM5DQ9BY66 1539 aa28.4■■■□□ 2.14
ZNF554-203ENST00000590116 ARHGEF12Q9NZN5 1544 aa28.4■■■□□ 2.14
ZNF554-203ENST00000590116 MSH5O43196 834 aa28.4■■■□□ 2.14
ZNF554-203ENST00000590116 DCAF11Q8TEB1 546 aa28.39■■■□□ 2.14
ZNF554-203ENST00000590116 SAMD9LQ8IVG5 1584 aa28.37■■■□□ 2.13
ZNF554-203ENST00000590116 ST20-MTHFSA0A0A6YYL1 179 aa28.37■■■□□ 2.13
ZNF554-203ENST00000590116 ARHGEF5Q12774 1597 aa28.35■■■□□ 2.13
ZNF554-203ENST00000590116 CDC42BPBQ9Y5S2 1711 aa28.35■■■□□ 2.13
ZNF554-203ENST00000590116 PTPRGP23470 1445 aa28.34■■■□□ 2.13
ZNF554-203ENST00000590116 ROCK2O75116 1388 aaKnown RBP28.34■■■□□ 2.13
ZNF554-203ENST00000590116 CCDC141Q6ZP82 1450 aa28.31■■■□□ 2.12
ZNF554-203ENST00000590116 FAM135AQ9P2D6 1515 aa28.3■■■□□ 2.12
ZNF554-203ENST00000590116 SMG6Q86US8 1419 aaKnown RBP28.3■■■□□ 2.12
ZNF554-203ENST00000590116 PREX2Q70Z35 1606 aa28.3■■■□□ 2.12
ZNF554-203ENST00000590116 TMC1Q8TDI8 760 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms