RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 PLIN1O60240 522 aa21.16■□□□□ 0.98
APBA3-205ENST00000590064 USP35Q9P2H5 1018 aa21.14■□□□□ 0.98
APBA3-205ENST00000590064 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
APBA3-205ENST00000590064 C11orf95C9JLR9 678 aaPredicted RBP21.13■□□□□ 0.97
APBA3-205ENST00000590064 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
APBA3-205ENST00000590064 BECN1Q14457 450 aa21.12■□□□□ 0.97
APBA3-205ENST00000590064 MYOM3Q5VTT5 1437 aa21.12■□□□□ 0.97
APBA3-205ENST00000590064 RALBP1Q15311 655 aa21.11■□□□□ 0.97
APBA3-205ENST00000590064 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
APBA3-205ENST00000590064 HFM1A2PYH4 1435 aa21.1■□□□□ 0.97
APBA3-205ENST00000590064 USP47Q96K76 1375 aa21.1■□□□□ 0.97
APBA3-205ENST00000590064 CASKIN1Q8WXD9 1431 aa21.09■□□□□ 0.97
APBA3-205ENST00000590064 KTN1Q86UP2 1357 aaKnown RBP21.09■□□□□ 0.97
APBA3-205ENST00000590064 ST20-MTHFSA0A0A6YYL1 179 aa21.08■□□□□ 0.97
APBA3-205ENST00000590064 GLIPR1L2Q4G1C9 344 aa21.08■□□□□ 0.97
APBA3-205ENST00000590064 NLRP13Q86W25 1043 aa21.07■□□□□ 0.96
APBA3-205ENST00000590064 KNSTRNQ9Y448 316 aa21.07■□□□□ 0.96
APBA3-205ENST00000590064 NCOA2Q15596 1464 aa21.06■□□□□ 0.96
APBA3-205ENST00000590064 GSE1Q14687 1217 aa21.06■□□□□ 0.96
APBA3-205ENST00000590064 PRKCSHP14314 528 aaPredicted RBP21.06■□□□□ 0.96
APBA3-205ENST00000590064 MYBBP1AQ9BQG0 1328 aaKnown RBP21.05■□□□□ 0.96
APBA3-205ENST00000590064 FYCO1Q9BQS8 1478 aa21.04■□□□□ 0.96
APBA3-205ENST00000590064 HSP90AA1P07900 732 aaKnown RBP21.04■□□□□ 0.96
APBA3-205ENST00000590064 CRBNQ96SW2 442 aa21.04■□□□□ 0.96
APBA3-205ENST00000590064 NAIPQ13075 1403 aa21.04■□□□□ 0.96
APBA3-205ENST00000590064 KIF15Q9NS87 1388 aa21.03■□□□□ 0.96
APBA3-205ENST00000590064 PDE3BQ13370 1112 aa21.03■□□□□ 0.96
APBA3-205ENST00000590064 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
APBA3-205ENST00000590064 SLKQ9H2G2 1235 aaPredicted RBP21.01■□□□□ 0.95
APBA3-205ENST00000590064 MS4A1P11836 297 aa21.01■□□□□ 0.95
APBA3-205ENST00000590064 ROCK2O75116 1388 aaKnown RBP21■□□□□ 0.95
APBA3-205ENST00000590064 PLEKHD1A6NEE1 506 aa21■□□□□ 0.95
APBA3-205ENST00000590064 SMG6Q86US8 1419 aaKnown RBP21■□□□□ 0.95
APBA3-205ENST00000590064 CFTRP13569 1480 aa21■□□□□ 0.95
APBA3-205ENST00000590064 NEUROD2Q15784 382 aa20.99■□□□□ 0.95
APBA3-205ENST00000590064 PCF11O94913 1555 aaKnown RBP20.99■□□□□ 0.95
APBA3-205ENST00000590064 FRAT1Q92837 279 aaPredicted RBP20.99■□□□□ 0.95
APBA3-205ENST00000590064 NUP155O75694 1391 aa20.99■□□□□ 0.95
APBA3-205ENST00000590064 BRPF3Q9ULD4 1205 aa20.99■□□□□ 0.95
APBA3-205ENST00000590064 NAP1L5Q96NT1 182 aaPredicted RBP20.98■□□□□ 0.95
APBA3-205ENST00000590064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.95
APBA3-205ENST00000590064 MAP3K1Q13233 1512 aa20.97■□□□□ 0.95
APBA3-205ENST00000590064 ZNF644Q9H582 1327 aaPredicted RBP20.97■□□□□ 0.95
APBA3-205ENST00000590064 PNISRQ8TF01 805 aaKnown RBP20.96■□□□□ 0.95
APBA3-205ENST00000590064 CDCA7LQ96GN5 454 aa20.95■□□□□ 0.95
APBA3-205ENST00000590064 NFKBIBQ15653 356 aa20.95■□□□□ 0.94
APBA3-205ENST00000590064 SPRYD3Q8NCJ5 442 aa20.95■□□□□ 0.94
APBA3-205ENST00000590064 TMF1P82094 1093 aa20.94■□□□□ 0.94
APBA3-205ENST00000590064 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
APBA3-205ENST00000590064 BACH2Q9BYV9 841 aa20.93■□□□□ 0.94
APBA3-205ENST00000590064 CHMP7Q8WUX9 453 aaPredicted RBP20.92■□□□□ 0.94
APBA3-205ENST00000590064 ANP32BQ92688 251 aaKnown RBP20.91■□□□□ 0.94
APBA3-205ENST00000590064 PEG3Q9GZU2 1588 aa20.91■□□□□ 0.94
APBA3-205ENST00000590064 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
APBA3-205ENST00000590064 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
APBA3-205ENST00000590064 BIVM-ERCC5R4GMW8 1640 aa20.9■□□□□ 0.94
APBA3-205ENST00000590064 FAM161AQ3B820 660 aa20.9■□□□□ 0.94
APBA3-205ENST00000590064 SKAP1Q86WV1 359 aa20.89■□□□□ 0.94
APBA3-205ENST00000590064 CHGAP10645 457 aaKnown RBP20.88■□□□□ 0.93
APBA3-205ENST00000590064 GZF1Q9H116 711 aaPredicted RBP20.88■□□□□ 0.93
APBA3-205ENST00000590064 TRIM44Q96DX7 344 aaPredicted RBP20.87■□□□□ 0.93
APBA3-205ENST00000590064 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
APBA3-205ENST00000590064 CENPQQ7L2Z9 268 aaPredicted RBP20.87■□□□□ 0.93
APBA3-205ENST00000590064 ANKRD30AQ9BXX3 1397 aa20.87■□□□□ 0.93
APBA3-205ENST00000590064 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
APBA3-205ENST00000590064 GOLGA2Q08379 1002 aa20.86■□□□□ 0.93
APBA3-205ENST00000590064 L1TD1Q5T7N2 865 aaKnown RBP20.84■□□□□ 0.93
APBA3-205ENST00000590064 PANK3Q9H999 370 aa20.84■□□□□ 0.93
APBA3-205ENST00000590064 CCDC146Q8IYE0 955 aa20.84■□□□□ 0.93
APBA3-205ENST00000590064 TNNT2P45379 298 aaPredicted RBP20.84■□□□□ 0.93
APBA3-205ENST00000590064 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.93
APBA3-205ENST00000590064 CDCA8Q53HL2 280 aa20.83■□□□□ 0.93
APBA3-205ENST00000590064 UNC13AQ9UPW8 1703 aa20.83■□□□□ 0.93
APBA3-205ENST00000590064 BRD4O60885 1362 aaPredicted RBP20.82■□□□□ 0.92
APBA3-205ENST00000590064 EFCAB5A4FU69 1503 aa20.82■□□□□ 0.92
APBA3-205ENST00000590064 PTPN23Q9H3S7 1636 aa20.81■□□□□ 0.92
APBA3-205ENST00000590064 FRAT2O75474 233 aaPredicted RBP20.79■□□□□ 0.92
APBA3-205ENST00000590064 ARID4BQ4LE39 1312 aaPredicted RBP20.79■□□□□ 0.92
APBA3-205ENST00000590064 FTSJ3Q8IY81 847 aaKnown RBP20.78■□□□□ 0.92
APBA3-205ENST00000590064 PNNQ9H307 717 aaKnown RBP20.76■□□□□ 0.91
APBA3-205ENST00000590064 RSPH6AQ9H0K4 717 aa20.74■□□□□ 0.91
APBA3-205ENST00000590064 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.91
APBA3-205ENST00000590064 ANKRD30BQ9BXX2 1392 aa20.73■□□□□ 0.91
APBA3-205ENST00000590064 EHBP1L1Q8N3D4 1523 aa20.73■□□□□ 0.91
APBA3-205ENST00000590064 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
APBA3-205ENST00000590064 CLUAP1Q96AJ1 413 aa20.7■□□□□ 0.9
APBA3-205ENST00000590064 GOLGA6L3A6NEY3 463 aa20.7■□□□□ 0.9
APBA3-205ENST00000590064 SUPT6HQ7KZ85 1726 aaKnown RBP20.69■□□□□ 0.9
APBA3-205ENST00000590064 ADAMTS8Q9UP79 889 aa20.69■□□□□ 0.9
APBA3-205ENST00000590064 HMGXB3Q12766 1538 aa20.68■□□□□ 0.9
APBA3-205ENST00000590064 COG6Q9Y2V7 657 aa20.67■□□□□ 0.9
APBA3-205ENST00000590064 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
APBA3-205ENST00000590064 APAF1O14727 1248 aa20.67■□□□□ 0.9
APBA3-205ENST00000590064 NCLP19338 710 aaKnown RBP20.67■□□□□ 0.9
APBA3-205ENST00000590064 HSCBQ8IWL3 235 aa20.67■□□□□ 0.9
APBA3-205ENST00000590064 MIA2Q96PC5 1412 aa20.66■□□□□ 0.9
APBA3-205ENST00000590064 HSP90AB1P08238 724 aaKnown RBP20.65■□□□□ 0.9
APBA3-205ENST00000590064 C20orf194Q5TEA3 1177 aa20.65■□□□□ 0.9
APBA3-205ENST00000590064 CENPJQ9HC77 1338 aaPredicted RBP20.65■□□□□ 0.9
APBA3-205ENST00000590064 MFAP1P55081 439 aaKnown RBP20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms