RNA–Protein interactions for RNA: ENST00000589916.5

BCAS3-223, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

TSL 2

Gene BCAS3, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-223ENST00000589916 SIGLEC1Q9BZZ2 1709 aa9.42□□□□□ -0.9
BCAS3-223ENST00000589916 ZFYVE16Q7Z3T8 1539 aa9.41□□□□□ -0.9
BCAS3-223ENST00000589916 ATP10AO60312 1499 aa9.4□□□□□ -0.9
BCAS3-223ENST00000589916 CEBPAP49715 358 aaPredicted RBP9.4□□□□□ -0.9
BCAS3-223ENST00000589916 FER1L4A9Z1Z3 1794 aa9.4□□□□□ -0.91
BCAS3-223ENST00000589916 TRAPPC8Q9Y2L5 1435 aa9.39□□□□□ -0.91
BCAS3-223ENST00000589916 SCAF1Q9H7N4 1312 aaKnown RBP9.39□□□□□ -0.91
BCAS3-223ENST00000589916 FAM9AQ8IZU1 332 aaPredicted RBP9.38□□□□□ -0.91
BCAS3-223ENST00000589916 C9orf84Q5VXU9 1444 aa9.37□□□□□ -0.91
BCAS3-223ENST00000589916 PIP4K2BP78356 416 aa9.36□□□□□ -0.91
BCAS3-223ENST00000589916 PKD2Q13563 968 aa9.36□□□□□ -0.91
BCAS3-223ENST00000589916 RGS17Q9UGC6 210 aaPredicted RBP9.36□□□□□ -0.91
BCAS3-223ENST00000589916 SRCAPQ6ZRS2 3230 aa9.35□□□□□ -0.91
BCAS3-223ENST00000589916 MLECQ14165 292 aa9.35□□□□□ -0.91
BCAS3-223ENST00000589916 CFAP74Q9C0B2 1584 aa9.35□□□□□ -0.91
BCAS3-223ENST00000589916 HECW1Q76N89 1606 aa9.34□□□□□ -0.91
BCAS3-223ENST00000589916 ZNF335Q9H4Z2 1342 aaPredicted RBP9.34□□□□□ -0.91
BCAS3-223ENST00000589916 TOM1O60784 492 aa9.34□□□□□ -0.91
BCAS3-223ENST00000589916 PLA2R1Q13018 1463 aa9.34□□□□□ -0.91
BCAS3-223ENST00000589916 NPATQ14207 1427 aa9.33□□□□□ -0.92
BCAS3-223ENST00000589916 REREQ9P2R6 1566 aa9.33□□□□□ -0.92
BCAS3-223ENST00000589916 TCOF1Q13428 1488 aaKnown RBP9.32□□□□□ -0.92
BCAS3-223ENST00000589916 AGLP35573 1532 aa9.31□□□□□ -0.92
BCAS3-223ENST00000589916 PLCH2O75038 1416 aa9.31□□□□□ -0.92
BCAS3-223ENST00000589916 SCAPERQ9BY12 1400 aa9.31□□□□□ -0.92
BCAS3-223ENST00000589916 CNTLNQ9NXG0 1405 aa9.31□□□□□ -0.92
BCAS3-223ENST00000589916 PLEKHD1A6NEE1 506 aa9.3□□□□□ -0.92
BCAS3-223ENST00000589916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.29□□□□□ -0.92
BCAS3-223ENST00000589916 CAMSAP1Q5T5Y3 1602 aa9.28□□□□□ -0.92
BCAS3-223ENST00000589916 POTEAQ6S8J7 498 aa9.28□□□□□ -0.92
BCAS3-223ENST00000589916 NUP153P49790 1475 aaKnown RBP9.28□□□□□ -0.92
BCAS3-223ENST00000589916 CPS1P31327 1500 aa9.27□□□□□ -0.93
BCAS3-223ENST00000589916 C3P01024 1663 aa9.27□□□□□ -0.93
BCAS3-223ENST00000589916 PTPRKQ15262 1439 aa9.27□□□□□ -0.93
BCAS3-223ENST00000589916 CTTNBP2Q8WZ74 1663 aa9.26□□□□□ -0.93
BCAS3-223ENST00000589916 PRXQ9BXM0 1461 aa9.26□□□□□ -0.93
BCAS3-223ENST00000589916 NCKAP5LQ9HCH0 1330 aa9.26□□□□□ -0.93
BCAS3-223ENST00000589916 KDM5CP41229 1560 aa9.25□□□□□ -0.93
BCAS3-223ENST00000589916 RAPGEF6Q8TEU7 1601 aa9.25□□□□□ -0.93
BCAS3-223ENST00000589916 ZNF518AQ6AHZ1 1483 aa9.25□□□□□ -0.93
BCAS3-223ENST00000589916 MLH3Q9UHC1 1453 aa9.25□□□□□ -0.93
BCAS3-223ENST00000589916 ALKQ9UM73 1620 aa9.24□□□□□ -0.93
BCAS3-223ENST00000589916 ARID3CA6NKF2 412 aa9.24□□□□□ -0.93
BCAS3-223ENST00000589916 EFCAB2Q5VUJ9 269 aa9.24□□□□□ -0.93
BCAS3-223ENST00000589916 UPF1Q92900 1129 aaKnown RBP eCLIP9.24□□□□□ -0.93
BCAS3-223ENST00000589916 PPP6R1Q9UPN7 881 aa9.24□□□□□ -0.93
BCAS3-223ENST00000589916 FOXD1Q16676 465 aa9.23□□□□□ -0.93
BCAS3-223ENST00000589916 SAMD9Q5K651 1589 aa9.22□□□□□ -0.93
BCAS3-223ENST00000589916 ZMYM3Q14202 1370 aa9.22□□□□□ -0.93
BCAS3-223ENST00000589916 SHANK2Q9UPX8 1470 aa9.21□□□□□ -0.93
BCAS3-223ENST00000589916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.21□□□□□ -0.94
BCAS3-223ENST00000589916 HNRNPUL2Q1KMD3 747 aaKnown RBP9.21□□□□□ -0.94
BCAS3-223ENST00000589916 ESF1Q9H501 851 aaKnown RBP9.21□□□□□ -0.94
BCAS3-223ENST00000589916 AFAP1Q8N556 730 aa9.2□□□□□ -0.94
BCAS3-223ENST00000589916 DIP2CQ9Y2E4 1556 aa9.2□□□□□ -0.94
BCAS3-223ENST00000589916 ZNF142P52746 1687 aaPredicted RBP9.2□□□□□ -0.94
BCAS3-223ENST00000589916 MROH2AA6NES4 1674 aa9.19□□□□□ -0.94
BCAS3-223ENST00000589916 IFFO2Q5TF58 517 aa9.17□□□□□ -0.94
BCAS3-223ENST00000589916 P3H3Q8IVL6 736 aa9.16□□□□□ -0.94
BCAS3-223ENST00000589916 CEP170BQ9Y4F5 1589 aaPredicted RBP9.16□□□□□ -0.94
BCAS3-223ENST00000589916 MED14O60244 1454 aa9.15□□□□□ -0.95
BCAS3-223ENST00000589916 VWDEQ8N2E2 1590 aa9.14□□□□□ -0.95
BCAS3-223ENST00000589916 A2ML1A8K2U0 1454 aa9.14□□□□□ -0.95
BCAS3-223ENST00000589916 FAM135BQ49AJ0 1406 aa9.13□□□□□ -0.95
BCAS3-223ENST00000589916 ABCA6Q8N139 1617 aa9.12□□□□□ -0.95
BCAS3-223ENST00000589916 MYO3AQ8NEV4 1616 aa9.12□□□□□ -0.95
BCAS3-223ENST00000589916 NEURL4Q96JN8 1562 aa9.12□□□□□ -0.95
BCAS3-223ENST00000589916 DNMT1P26358 1616 aaKnown RBP9.1□□□□□ -0.95
BCAS3-223ENST00000589916 LRRC7Q96NW7 1537 aa9.1□□□□□ -0.95
BCAS3-223ENST00000589916 ANKLE2Q86XL3 938 aa9.09□□□□□ -0.95
BCAS3-223ENST00000589916 CDK11AQ9UQ88 783 aaPredicted RBP9.08□□□□□ -0.96
BCAS3-223ENST00000589916 DEPDC5O75140 1603 aa9.07□□□□□ -0.96
BCAS3-223ENST00000589916 KIDINS220Q9ULH0 1771 aa9.07□□□□□ -0.96
BCAS3-223ENST00000589916 RNF17Q9BXT8 1623 aaKnown RBP9.06□□□□□ -0.96
BCAS3-223ENST00000589916 MYO5CQ9NQX4 1742 aa9.06□□□□□ -0.96
BCAS3-223ENST00000589916 THEMISQ8N1K5 641 aaPredicted RBP9.06□□□□□ -0.96
BCAS3-223ENST00000589916 TRIM52Q96A61 297 aa9.05□□□□□ -0.96
BCAS3-223ENST00000589916 NPHP4O75161 1426 aaPredicted RBP9.05□□□□□ -0.96
BCAS3-223ENST00000589916 SYNMO15061 1565 aa9.04□□□□□ -0.96
BCAS3-223ENST00000589916 PLXNC1O60486 1568 aa9.04□□□□□ -0.96
BCAS3-223ENST00000589916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.04□□□□□ -0.96
BCAS3-223ENST00000589916 ZRANB1Q9UGI0 708 aa9.04□□□□□ -0.96
BCAS3-223ENST00000589916 ABCC1P33527 1531 aa9.04□□□□□ -0.96
BCAS3-223ENST00000589916 ARHGAP5Q13017 1502 aa9.04□□□□□ -0.96
BCAS3-223ENST00000589916 TROQ12816 1431 aaPredicted RBP9.04□□□□□ -0.96
BCAS3-223ENST00000589916 CDK12Q9NYV4 1490 aaPredicted RBP9.03□□□□□ -0.96
BCAS3-223ENST00000589916 SETD1AO15047 1707 aaKnown RBP9.03□□□□□ -0.96
BCAS3-223ENST00000589916 POLR1AO95602 1720 aaPredicted RBP9.03□□□□□ -0.96
BCAS3-223ENST00000589916 RBM33Q96EV2 1170 aaKnown RBP9.03□□□□□ -0.96
BCAS3-223ENST00000589916 MYT1LQ9UL68 1186 aa9.03□□□□□ -0.96
BCAS3-223ENST00000589916 CDK13Q14004 1512 aaKnown RBP9.02□□□□□ -0.97
BCAS3-223ENST00000589916 SUPT6HQ7KZ85 1726 aaKnown RBP9.02□□□□□ -0.97
BCAS3-223ENST00000589916 NLRP1Q9C000 1473 aa9.02□□□□□ -0.97
BCAS3-223ENST00000589916 KDM5DQ9BY66 1539 aa9.01□□□□□ -0.97
BCAS3-223ENST00000589916 FAM135AQ9P2D6 1515 aa9.01□□□□□ -0.97
BCAS3-223ENST00000589916 TNRQ92752 1358 aa9□□□□□ -0.97
BCAS3-223ENST00000589916 KIAA1107Q9UPP5 1409 aa9□□□□□ -0.97
BCAS3-223ENST00000589916 ZNF772Q68DY9 489 aaPredicted RBP9□□□□□ -0.97
BCAS3-223ENST00000589916 SAMD9LQ8IVG5 1584 aa8.99□□□□□ -0.97
BCAS3-223ENST00000589916 MIA2Q96PC5 1412 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms