RNA–Protein interactions for RNA: ENST00000589878.5

LSM14A-207, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 4

Gene LSM14A, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-207ENST00000589878 SCAPERQ9BY12 1400 aa30.71■■■□□ 2.51
LSM14A-207ENST00000589878 MAGI2Q86UL8 1455 aa30.7■■■□□ 2.5
LSM14A-207ENST00000589878 EHMT2Q96KQ7 1210 aa30.68■■■□□ 2.5
LSM14A-207ENST00000589878 PLCH2O75038 1416 aa30.65■■■□□ 2.5
LSM14A-207ENST00000589878 CERKQ8TCT0 537 aa30.65■■■□□ 2.5
LSM14A-207ENST00000589878 ATP10AO60312 1499 aa30.59■■■□□ 2.49
LSM14A-207ENST00000589878 CEBPAP49715 358 aaPredicted RBP30.58■■■□□ 2.49
LSM14A-207ENST00000589878 EFCAB2Q5VUJ9 269 aa30.58■■■□□ 2.49
LSM14A-207ENST00000589878 MYO5CQ9NQX4 1742 aa30.56■■■□□ 2.48
LSM14A-207ENST00000589878 ARHGEF12Q9NZN5 1544 aa30.55■■■□□ 2.48
LSM14A-207ENST00000589878 C9orf84Q5VXU9 1444 aa30.55■■■□□ 2.48
LSM14A-207ENST00000589878 UBTFP17480 764 aaKnown RBP30.54■■■□□ 2.48
LSM14A-207ENST00000589878 MYT1LQ9UL68 1186 aa30.52■■■□□ 2.48
LSM14A-207ENST00000589878 PREX1Q8TCU6 1659 aa30.52■■■□□ 2.48
LSM14A-207ENST00000589878 CDK11AQ9UQ88 783 aaPredicted RBP30.5■■■□□ 2.47
LSM14A-207ENST00000589878 KIF14Q15058 1648 aa30.5■■■□□ 2.47
LSM14A-207ENST00000589878 AFAP1Q8N556 730 aa30.48■■■□□ 2.47
LSM14A-207ENST00000589878 FMN1Q68DA7 1419 aa30.47■■■□□ 2.47
LSM14A-207ENST00000589878 ARHGAP5Q13017 1502 aa30.45■■■□□ 2.47
LSM14A-207ENST00000589878 ZNF518AQ6AHZ1 1483 aa30.43■■■□□ 2.46
LSM14A-207ENST00000589878 ARHGAP35Q9NRY4 1499 aa30.42■■■□□ 2.46
LSM14A-207ENST00000589878 STRCQ7RTU9 1775 aa30.41■■■□□ 2.46
LSM14A-207ENST00000589878 TROQ12816 1431 aaPredicted RBP30.39■■■□□ 2.45
LSM14A-207ENST00000589878 DMRT2Q9Y5R5 561 aa30.38■■■□□ 2.45
LSM14A-207ENST00000589878 UHRF1BP1Q6BDS2 1440 aa30.37■■■□□ 2.45
LSM14A-207ENST00000589878 KDM5CP41229 1560 aa30.37■■■□□ 2.45
LSM14A-207ENST00000589878 CLIP1P30622 1438 aa30.36■■■□□ 2.45
LSM14A-207ENST00000589878 DIP2CQ9Y2E4 1556 aa30.35■■■□□ 2.45
LSM14A-207ENST00000589878 LRRIQ1Q96JM4 1722 aa30.35■■■□□ 2.45
LSM14A-207ENST00000589878 SETD1BQ9UPS6 1966 aaKnown RBP30.34■■■□□ 2.45
LSM14A-207ENST00000589878 CDC42BPBQ9Y5S2 1711 aa30.33■■■□□ 2.45
LSM14A-207ENST00000589878 ABCA6Q8N139 1617 aa30.3■■■□□ 2.44
LSM14A-207ENST00000589878 ESF1Q9H501 851 aaKnown RBP30.3■■■□□ 2.44
LSM14A-207ENST00000589878 C3P01024 1663 aa30.3■■■□□ 2.44
LSM14A-207ENST00000589878 DISP3Q9P2K9 1392 aa30.29■■■□□ 2.44
LSM14A-207ENST00000589878 TRAPPC8Q9Y2L5 1435 aa30.25■■■□□ 2.43
LSM14A-207ENST00000589878 ILDR2Q71H61 639 aa30.25■■■□□ 2.43
LSM14A-207ENST00000589878 MLH3Q9UHC1 1453 aa30.25■■■□□ 2.43
LSM14A-207ENST00000589878 REREQ9P2R6 1566 aa30.24■■■□□ 2.43
LSM14A-207ENST00000589878 PREX2Q70Z35 1606 aa30.21■■■□□ 2.43
LSM14A-207ENST00000589878 ITSN2Q9NZM3 1697 aa30.2■■■□□ 2.42
LSM14A-207ENST00000589878 ABCC1P33527 1531 aa30.19■■■□□ 2.42
LSM14A-207ENST00000589878 PTPRTO14522 1441 aa30.19■■■□□ 2.42
LSM14A-207ENST00000589878 AGLP35573 1532 aa30.17■■■□□ 2.42
LSM14A-207ENST00000589878 KIDINS220Q9ULH0 1771 aa30.15■■■□□ 2.42
LSM14A-207ENST00000589878 ZNF777Q9ULD5 760 aaPredicted RBP30.13■■■□□ 2.41
LSM14A-207ENST00000589878 CDC42BPAQ5VT25 1732 aa30.12■■■□□ 2.41
LSM14A-207ENST00000589878 CASKIN1Q8WXD9 1431 aa30.1■■■□□ 2.41
LSM14A-207ENST00000589878 CCDC18Q5T9S5 1454 aa30.1■■■□□ 2.41
LSM14A-207ENST00000589878 LTBP4Q8N2S1 1624 aa30.08■■■□□ 2.41
LSM14A-207ENST00000589878 CNTLNQ9NXG0 1405 aa30.08■■■□□ 2.41
LSM14A-207ENST00000589878 SOCS7O14512 581 aa30.08■■■□□ 2.41
LSM14A-207ENST00000589878 CHIC1Q5VXU3 224 aa30.08■■■□□ 2.41
LSM14A-207ENST00000589878 NCOA1Q15788 1441 aa30.07■■■□□ 2.4
LSM14A-207ENST00000589878 SAMD9LQ8IVG5 1584 aa30.04■■■□□ 2.4
LSM14A-207ENST00000589878 SPATA31D1Q6ZQQ2 1576 aa30.03■■■□□ 2.4
LSM14A-207ENST00000589878 SUPT6HQ7KZ85 1726 aaKnown RBP30.03■■■□□ 2.4
LSM14A-207ENST00000589878 HNRNPMP52272 730 aaKnown RBP eCLIP30.03■■■□□ 2.42e-8■■■□□ 15.5
LSM14A-207ENST00000589878 CAMSAP1Q5T5Y3 1602 aa30.03■■■□□ 2.4
LSM14A-207ENST00000589878 SPAG9O60271 1321 aaKnown RBP30.01■■■□□ 2.4
LSM14A-207ENST00000589878 ZMYM3Q14202 1370 aa30.01■■■□□ 2.39
LSM14A-207ENST00000589878 NCKAP5LQ9HCH0 1330 aa30■■■□□ 2.39
LSM14A-207ENST00000589878 MROH2AA6NES4 1674 aa29.99■■■□□ 2.39
LSM14A-207ENST00000589878 SYCP2Q9BX26 1530 aa29.99■■■□□ 2.39
LSM14A-207ENST00000589878 NPATQ14207 1427 aa29.96■■■□□ 2.39
LSM14A-207ENST00000589878 CLTCQ00610 1675 aaKnown RBP29.95■■■□□ 2.39
LSM14A-207ENST00000589878 GPATCH8Q9UKJ3 1502 aaKnown RBP29.95■■■□□ 2.38
LSM14A-207ENST00000589878 IQSEC2Q5JU85 1478 aa29.94■■■□□ 2.38
LSM14A-207ENST00000589878 FYCO1Q9BQS8 1478 aa29.93■■■□□ 2.38
LSM14A-207ENST00000589878 ZNF335Q9H4Z2 1342 aaPredicted RBP29.93■■■□□ 2.38
LSM14A-207ENST00000589878 GGT6Q6P531 493 aa29.91■■■□□ 2.38
LSM14A-207ENST00000589878 ATP7AQ04656 1500 aa29.91■■■□□ 2.38
LSM14A-207ENST00000589878 CFDP1Q9UEE9 299 aaPredicted RBP29.89■■■□□ 2.38
LSM14A-207ENST00000589878 UBAP1LF5GYI3 381 aa29.88■■■□□ 2.37
LSM14A-207ENST00000589878 A2MP01023 1474 aa29.87■■■□□ 2.37
LSM14A-207ENST00000589878 MYO3AQ8NEV4 1616 aa29.86■■■□□ 2.37
LSM14A-207ENST00000589878 INO80Q9ULG1 1556 aaPredicted RBP29.84■■■□□ 2.37
LSM14A-207ENST00000589878 PTPRKQ15262 1439 aa29.83■■■□□ 2.37
LSM14A-207ENST00000589878 KIAA1107Q9UPP5 1409 aa29.83■■■□□ 2.37
LSM14A-207ENST00000589878 CCNB3Q8WWL7 1395 aa29.83■■■□□ 2.37
LSM14A-207ENST00000589878 ZNF142P52746 1687 aaPredicted RBP29.82■■■□□ 2.36
LSM14A-207ENST00000589878 PLXNC1O60486 1568 aa29.82■■■□□ 2.36
LSM14A-207ENST00000589878 PKD2Q13563 968 aa29.82■■■□□ 2.36
LSM14A-207ENST00000589878 CEP170BQ9Y4F5 1589 aaPredicted RBP29.81■■■□□ 2.36
LSM14A-207ENST00000589878 PLEKHH2Q8IVE3 1493 aa29.81■■■□□ 2.36
LSM14A-207ENST00000589878 PLA2R1Q13018 1463 aa29.78■■■□□ 2.36
LSM14A-207ENST00000589878 ZNF644Q9H582 1327 aaPredicted RBP29.76■■■□□ 2.36
LSM14A-207ENST00000589878 TCOF1Q13428 1488 aaKnown RBP29.75■■■□□ 2.35
LSM14A-207ENST00000589878 PPP6R1Q9UPN7 881 aa29.75■■■□□ 2.35
LSM14A-207ENST00000589878 MTUS2Q5JR59 1369 aa29.75■■■□□ 2.35
LSM14A-207ENST00000589878 ADGBQ8N7X0 1667 aa29.74■■■□□ 2.35
LSM14A-207ENST00000589878 SCAF1Q9H7N4 1312 aaKnown RBP29.69■■■□□ 2.34
LSM14A-207ENST00000589878 A2ML1A8K2U0 1454 aa29.67■■■□□ 2.34
LSM14A-207ENST00000589878 DNMT1P26358 1616 aaKnown RBP29.67■■■□□ 2.34
LSM14A-207ENST00000589878 TIAM1Q13009 1591 aa29.65■■■□□ 2.34
LSM14A-207ENST00000589878 PIP4K2BP78356 416 aa29.64■■■□□ 2.34
LSM14A-207ENST00000589878 FBXO31Q5XUX0 539 aaPredicted RBP29.64■■■□□ 2.34
LSM14A-207ENST00000589878 MBD5Q9P267 1494 aa29.62■■■□□ 2.33
LSM14A-207ENST00000589878 KIF3BO15066 747 aa29.61■■■□□ 2.33
LSM14A-207ENST00000589878 DHX29Q7Z478 1369 aaKnown RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms