RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 EFCAB5A4FU69 1503 aa16.57■□□□□ 0.24
TREM1-204ENST00000589614 CFAP74Q9C0B2 1584 aa16.56■□□□□ 0.24
TREM1-204ENST00000589614 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
TREM1-204ENST00000589614 ZFYVE16Q7Z3T8 1539 aa16.55■□□□□ 0.24
TREM1-204ENST00000589614 IQSEC2Q5JU85 1478 aa16.55■□□□□ 0.24
TREM1-204ENST00000589614 MAGI2Q86UL8 1455 aa16.55■□□□□ 0.24
TREM1-204ENST00000589614 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
TREM1-204ENST00000589614 ARID3CA6NKF2 412 aa16.54■□□□□ 0.24
TREM1-204ENST00000589614 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.24
TREM1-204ENST00000589614 PTPRTO14522 1441 aa16.52■□□□□ 0.23
TREM1-204ENST00000589614 RAPGEF6Q8TEU7 1601 aa16.51■□□□□ 0.23
TREM1-204ENST00000589614 LTBP4Q8N2S1 1624 aa16.49■□□□□ 0.23
TREM1-204ENST00000589614 MLECQ14165 292 aa16.48■□□□□ 0.23
TREM1-204ENST00000589614 UHRF1BP1Q6BDS2 1440 aa16.47■□□□□ 0.23
TREM1-204ENST00000589614 HECW1Q76N89 1606 aa16.47■□□□□ 0.23
TREM1-204ENST00000589614 SAMD9Q5K651 1589 aa16.44■□□□□ 0.22
TREM1-204ENST00000589614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
TREM1-204ENST00000589614 NPM3O75607 178 aaKnown RBP16.44■□□□□ 0.22
TREM1-204ENST00000589614 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
TREM1-204ENST00000589614 PRXQ9BXM0 1461 aa16.43■□□□□ 0.22
TREM1-204ENST00000589614 ATP10AO60312 1499 aa16.42■□□□□ 0.22
TREM1-204ENST00000589614 NUP153P49790 1475 aaKnown RBP16.42■□□□□ 0.22
TREM1-204ENST00000589614 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.42■□□□□ 0.22
TREM1-204ENST00000589614 CEBPAP49715 358 aaPredicted RBP16.41■□□□□ 0.22
TREM1-204ENST00000589614 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
TREM1-204ENST00000589614 C9orf84Q5VXU9 1444 aa16.41■□□□□ 0.22
TREM1-204ENST00000589614 PLEKHD1A6NEE1 506 aa16.39■□□□□ 0.21
TREM1-204ENST00000589614 SCAPERQ9BY12 1400 aa16.36■□□□□ 0.21
TREM1-204ENST00000589614 C3P01024 1663 aa16.35■□□□□ 0.21
TREM1-204ENST00000589614 NCOA1Q15788 1441 aa16.34■□□□□ 0.21
TREM1-204ENST00000589614 PLCH2O75038 1416 aa16.31■□□□□ 0.2
TREM1-204ENST00000589614 REREQ9P2R6 1566 aa16.3■□□□□ 0.2
TREM1-204ENST00000589614 TRAPPC8Q9Y2L5 1435 aa16.3■□□□□ 0.2
TREM1-204ENST00000589614 UBAP1LF5GYI3 381 aa16.3■□□□□ 0.2
TREM1-204ENST00000589614 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
TREM1-204ENST00000589614 KDM5CP41229 1560 aa16.27■□□□□ 0.2
TREM1-204ENST00000589614 ZNF518AQ6AHZ1 1483 aa16.27■□□□□ 0.19
TREM1-204ENST00000589614 MYO5CQ9NQX4 1742 aa16.26■□□□□ 0.19
TREM1-204ENST00000589614 AGLP35573 1532 aa16.25■□□□□ 0.19
TREM1-204ENST00000589614 CAMSAP1Q5T5Y3 1602 aa16.24■□□□□ 0.19
TREM1-204ENST00000589614 DIP2CQ9Y2E4 1556 aa16.24■□□□□ 0.19
TREM1-204ENST00000589614 EFCAB2Q5VUJ9 269 aa16.23■□□□□ 0.19
TREM1-204ENST00000589614 ZNF335Q9H4Z2 1342 aaPredicted RBP16.21■□□□□ 0.19
TREM1-204ENST00000589614 CNTLNQ9NXG0 1405 aa16.21■□□□□ 0.19
TREM1-204ENST00000589614 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
TREM1-204ENST00000589614 ESF1Q9H501 851 aaKnown RBP16.2■□□□□ 0.18
TREM1-204ENST00000589614 NPATQ14207 1427 aa16.19■□□□□ 0.18
TREM1-204ENST00000589614 MROH2AA6NES4 1674 aa16.19■□□□□ 0.18
TREM1-204ENST00000589614 ABCA6Q8N139 1617 aa16.19■□□□□ 0.18
TREM1-204ENST00000589614 MLH3Q9UHC1 1453 aa16.18■□□□□ 0.18
TREM1-204ENST00000589614 PLA2R1Q13018 1463 aa16.17■□□□□ 0.18
TREM1-204ENST00000589614 CDK13Q14004 1512 aaKnown RBP16.16■□□□□ 0.18
TREM1-204ENST00000589614 ZNF142P52746 1687 aaPredicted RBP16.16■□□□□ 0.18
TREM1-204ENST00000589614 HSPA1LP34931 641 aa16.16■□□□□ 0.18
TREM1-204ENST00000589614 AFAP1Q8N556 730 aa16.16■□□□□ 0.18
TREM1-204ENST00000589614 PKD2Q13563 968 aa16.15■□□□□ 0.18
TREM1-204ENST00000589614 SUPT6HQ7KZ85 1726 aaKnown RBP16.15■□□□□ 0.18
TREM1-204ENST00000589614 TCOF1Q13428 1488 aaKnown RBP16.14■□□□□ 0.17
TREM1-204ENST00000589614 NCKAP5LQ9HCH0 1330 aa16.14■□□□□ 0.17
TREM1-204ENST00000589614 ARHGAP5Q13017 1502 aa16.11■□□□□ 0.17
TREM1-204ENST00000589614 MYT1LQ9UL68 1186 aa16.11■□□□□ 0.17
TREM1-204ENST00000589614 KIF14Q15058 1648 aa16.1■□□□□ 0.17
TREM1-204ENST00000589614 MYO3AQ8NEV4 1616 aa16.1■□□□□ 0.17
TREM1-204ENST00000589614 TOM1O60784 492 aa16.1■□□□□ 0.17
TREM1-204ENST00000589614 SCAF1Q9H7N4 1312 aaKnown RBP16.1■□□□□ 0.17
TREM1-204ENST00000589614 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
TREM1-204ENST00000589614 KIDINS220Q9ULH0 1771 aa16.08■□□□□ 0.17
TREM1-204ENST00000589614 ZMYM3Q14202 1370 aa16.08■□□□□ 0.16
TREM1-204ENST00000589614 CPS1P31327 1500 aa16.08■□□□□ 0.16
TREM1-204ENST00000589614 CDC42BPBQ9Y5S2 1711 aa16.08■□□□□ 0.16
TREM1-204ENST00000589614 ZBTB22O15209 634 aa16.07■□□□□ 0.16
TREM1-204ENST00000589614 PIP4K2BP78356 416 aa16.07■□□□□ 0.16
TREM1-204ENST00000589614 CDK11AQ9UQ88 783 aaPredicted RBP16.06■□□□□ 0.16
TREM1-204ENST00000589614 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
TREM1-204ENST00000589614 ITSN2Q9NZM3 1697 aa16.05■□□□□ 0.16
TREM1-204ENST00000589614 MSH5O43196 834 aa16.04■□□□□ 0.16
TREM1-204ENST00000589614 ABCC1P33527 1531 aa16.04■□□□□ 0.16
TREM1-204ENST00000589614 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.16
TREM1-204ENST00000589614 PTPRKQ15262 1439 aa16.02■□□□□ 0.16
TREM1-204ENST00000589614 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.15
TREM1-204ENST00000589614 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.15
TREM1-204ENST00000589614 PREX2Q70Z35 1606 aa16.01■□□□□ 0.15
TREM1-204ENST00000589614 SHANK2Q9UPX8 1470 aa16■□□□□ 0.15
TREM1-204ENST00000589614 CLIP1P30622 1438 aa16■□□□□ 0.15
TREM1-204ENST00000589614 ALKQ9UM73 1620 aa15.99■□□□□ 0.15
TREM1-204ENST00000589614 FMN1Q68DA7 1419 aa15.98■□□□□ 0.15
TREM1-204ENST00000589614 DNMT1P26358 1616 aaKnown RBP15.97■□□□□ 0.15
TREM1-204ENST00000589614 A2ML1A8K2U0 1454 aa15.97■□□□□ 0.15
TREM1-204ENST00000589614 NEURL4Q96JN8 1562 aa15.96■□□□□ 0.15
TREM1-204ENST00000589614 SAMD9LQ8IVG5 1584 aa15.95■□□□□ 0.14
TREM1-204ENST00000589614 PLXNC1O60486 1568 aa15.94■□□□□ 0.14
TREM1-204ENST00000589614 EEA1Q15075 1411 aa15.94■□□□□ 0.14
TREM1-204ENST00000589614 VWDEQ8N2E2 1590 aa15.92■□□□□ 0.14
TREM1-204ENST00000589614 LRRIQ1Q96JM4 1722 aa15.92■□□□□ 0.14
TREM1-204ENST00000589614 RGS17Q9UGC6 210 aaPredicted RBP15.92■□□□□ 0.14
TREM1-204ENST00000589614 ATP1B4Q9UN42 357 aaPredicted RBP15.92■□□□□ 0.14
TREM1-204ENST00000589614 CDC42BPAQ5VT25 1732 aa15.91■□□□□ 0.14
TREM1-204ENST00000589614 ATP7AQ04656 1500 aa15.88■□□□□ 0.13
TREM1-204ENST00000589614 RNF17Q9BXT8 1623 aaKnown RBP15.87■□□□□ 0.13
TREM1-204ENST00000589614 A2MP01023 1474 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms