RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 EFCAB2Q5VUJ9 269 aa14.38□□□□□ -0.11
ZNF440-206ENST00000588954 PLCH2O75038 1416 aa14.38□□□□□ -0.11
ZNF440-206ENST00000588954 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
ZNF440-206ENST00000588954 PPRC1Q5VV67 1664 aaKnown RBP14.36□□□□□ -0.11
ZNF440-206ENST00000588954 FANCAO15360 1455 aa14.35□□□□□ -0.11
ZNF440-206ENST00000588954 NEO1Q92859 1461 aa14.35□□□□□ -0.11
ZNF440-206ENST00000588954 SUPT6HQ7KZ85 1726 aaKnown RBP14.35□□□□□ -0.11
ZNF440-206ENST00000588954 MYO5CQ9NQX4 1742 aa14.35□□□□□ -0.11
ZNF440-206ENST00000588954 CFDP1Q9UEE9 299 aaPredicted RBP14.34□□□□□ -0.11
ZNF440-206ENST00000588954 ARHGAP5Q13017 1502 aa14.34□□□□□ -0.11
ZNF440-206ENST00000588954 ARAP3Q8WWN8 1544 aa14.34□□□□□ -0.11
ZNF440-206ENST00000588954 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
ZNF440-206ENST00000588954 NCOA2Q15596 1464 aa14.33□□□□□ -0.12
ZNF440-206ENST00000588954 CFAP74Q9C0B2 1584 aa14.33□□□□□ -0.12
ZNF440-206ENST00000588954 AKNAQ7Z591 1439 aa14.32□□□□□ -0.12
ZNF440-206ENST00000588954 ZNF777Q9ULD5 760 aaPredicted RBP14.32□□□□□ -0.12
ZNF440-206ENST00000588954 GPATCH8Q9UKJ3 1502 aaKnown RBP14.31□□□□□ -0.12
ZNF440-206ENST00000588954 KDM6BO15054 1643 aa14.31□□□□□ -0.12
ZNF440-206ENST00000588954 PREX2Q70Z35 1606 aa14.29□□□□□ -0.12
ZNF440-206ENST00000588954 ADGRL1O94910 1474 aa14.28□□□□□ -0.12
ZNF440-206ENST00000588954 CDC42BPAQ5VT25 1732 aa14.27□□□□□ -0.12
ZNF440-206ENST00000588954 ITSN2Q9NZM3 1697 aa14.27□□□□□ -0.12
ZNF440-206ENST00000588954 SCAPERQ9BY12 1400 aa14.27□□□□□ -0.12
ZNF440-206ENST00000588954 CDC42BPBQ9Y5S2 1711 aa14.27□□□□□ -0.13
ZNF440-206ENST00000588954 DENND4BO75064 1496 aaPredicted RBP14.26□□□□□ -0.13
ZNF440-206ENST00000588954 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
ZNF440-206ENST00000588954 MYOM3Q5VTT5 1437 aa14.25□□□□□ -0.13
ZNF440-206ENST00000588954 RAPGEF3O95398 923 aa14.25□□□□□ -0.13
ZNF440-206ENST00000588954 PLEKHH2Q8IVE3 1493 aa14.25□□□□□ -0.13
ZNF440-206ENST00000588954 COL17A1Q9UMD9 1497 aaPredicted RBP14.25□□□□□ -0.13
ZNF440-206ENST00000588954 MIA2Q96PC5 1412 aa14.24□□□□□ -0.13
ZNF440-206ENST00000588954 MYT1LQ9UL68 1186 aa14.22□□□□□ -0.13
ZNF440-206ENST00000588954 KIAA1107Q9UPP5 1409 aa14.22□□□□□ -0.13
ZNF440-206ENST00000588954 ZNF644Q9H582 1327 aaPredicted RBP14.21□□□□□ -0.13
ZNF440-206ENST00000588954 HNRNPMP52272 730 aaKnown RBP eCLIP14.21□□□□□ -0.13
ZNF440-206ENST00000588954 RSPH4AQ5TD94 716 aa14.21□□□□□ -0.13
ZNF440-206ENST00000588954 POGZQ7Z3K3 1410 aa14.21□□□□□ -0.13
ZNF440-206ENST00000588954 ZNF518AQ6AHZ1 1483 aa14.2□□□□□ -0.14
ZNF440-206ENST00000588954 AFAP1Q8N556 730 aa14.2□□□□□ -0.14
ZNF440-206ENST00000588954 SAMD9LQ8IVG5 1584 aa14.2□□□□□ -0.14
ZNF440-206ENST00000588954 ABCC1P33527 1531 aa14.2□□□□□ -0.14
ZNF440-206ENST00000588954 CAMSAP2Q08AD1 1489 aa14.18□□□□□ -0.14
ZNF440-206ENST00000588954 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
ZNF440-206ENST00000588954 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
ZNF440-206ENST00000588954 SYCP2Q9BX26 1530 aa14.18□□□□□ -0.14
ZNF440-206ENST00000588954 FGD6Q6ZV73 1430 aa14.17□□□□□ -0.14
ZNF440-206ENST00000588954 TRAPPC8Q9Y2L5 1435 aa14.16□□□□□ -0.14
ZNF440-206ENST00000588954 ARHGEF12Q9NZN5 1544 aa14.16□□□□□ -0.14
ZNF440-206ENST00000588954 TSPY4P0CV99 314 aa14.16□□□□□ -0.14
ZNF440-206ENST00000588954 TSPY10P0CW01 314 aa14.16□□□□□ -0.14
ZNF440-206ENST00000588954 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
ZNF440-206ENST00000588954 MAGI2Q86UL8 1455 aa14.16□□□□□ -0.14
ZNF440-206ENST00000588954 SPAG9O60271 1321 aaKnown RBP14.15□□□□□ -0.14
ZNF440-206ENST00000588954 RICTORQ6R327 1708 aa14.15□□□□□ -0.14
ZNF440-206ENST00000588954 FRMPD1Q5SYB0 1578 aa14.14□□□□□ -0.15
ZNF440-206ENST00000588954 PTPN23Q9H3S7 1636 aa14.14□□□□□ -0.15
ZNF440-206ENST00000588954 MBD5Q9P267 1494 aa14.13□□□□□ -0.15
ZNF440-206ENST00000588954 ZMYM4Q5VZL5 1548 aa14.13□□□□□ -0.15
ZNF440-206ENST00000588954 CCDC141Q6ZP82 1450 aa14.12□□□□□ -0.15
ZNF440-206ENST00000588954 NPM3O75607 178 aaKnown RBP14.12□□□□□ -0.15
ZNF440-206ENST00000588954 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
ZNF440-206ENST00000588954 KDM5CP41229 1560 aa14.12□□□□□ -0.15
ZNF440-206ENST00000588954 TCOF1Q13428 1488 aaKnown RBP14.12□□□□□ -0.15
ZNF440-206ENST00000588954 MLH3Q9UHC1 1453 aa14.12□□□□□ -0.15
ZNF440-206ENST00000588954 ZFYVE16Q7Z3T8 1539 aa14.11□□□□□ -0.15
ZNF440-206ENST00000588954 ARHGEF5Q12774 1597 aa14.1□□□□□ -0.15
ZNF440-206ENST00000588954 HECW2Q9P2P5 1572 aa14.09□□□□□ -0.15
ZNF440-206ENST00000588954 RTEL1-TNFRSF6BF6WH68 1400 aa14.08□□□□□ -0.15
ZNF440-206ENST00000588954 YEATS2Q9ULM3 1422 aa14.08□□□□□ -0.15
ZNF440-206ENST00000588954 ARID4BQ4LE39 1312 aaPredicted RBP14.08□□□□□ -0.16
ZNF440-206ENST00000588954 ATP10AO60312 1499 aa14.07□□□□□ -0.16
ZNF440-206ENST00000588954 ARHGEF40Q8TER5 1519 aa14.07□□□□□ -0.16
ZNF440-206ENST00000588954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.07□□□□□ -0.16
ZNF440-206ENST00000588954 ATP7AQ04656 1500 aa14.06□□□□□ -0.16
ZNF440-206ENST00000588954 DAPK1P53355 1430 aa14.06□□□□□ -0.16
ZNF440-206ENST00000588954 C9orf84Q5VXU9 1444 aa14.06□□□□□ -0.16
ZNF440-206ENST00000588954 ABCC5O15440 1437 aa14.05□□□□□ -0.16
ZNF440-206ENST00000588954 RRBP1Q9P2E9 1410 aaKnown RBP14.05□□□□□ -0.16
ZNF440-206ENST00000588954 INO80Q9ULG1 1556 aaPredicted RBP14.04□□□□□ -0.16
ZNF440-206ENST00000588954 KIDINS220Q9ULH0 1771 aa14.04□□□□□ -0.16
ZNF440-206ENST00000588954 ITGAEP38570 1179 aa14.03□□□□□ -0.16
ZNF440-206ENST00000588954 CHIC2Q9UKJ5 165 aa14.03□□□□□ -0.16
ZNF440-206ENST00000588954 SHANK2Q9UPX8 1470 aa14.03□□□□□ -0.16
ZNF440-206ENST00000588954 DNMT1P26358 1616 aaKnown RBP14.03□□□□□ -0.16
ZNF440-206ENST00000588954 DIP2CQ9Y2E4 1556 aa14.02□□□□□ -0.16
ZNF440-206ENST00000588954 ABCA6Q8N139 1617 aa14.01□□□□□ -0.17
ZNF440-206ENST00000588954 MAST1Q9Y2H9 1570 aa14.01□□□□□ -0.17
ZNF440-206ENST00000588954 ANKRD30AQ9BXX3 1397 aa14.01□□□□□ -0.17
ZNF440-206ENST00000588954 A2MP01023 1474 aa14□□□□□ -0.17
ZNF440-206ENST00000588954 RRP7BPQ9NSQ0 103 aa14□□□□□ -0.17
ZNF440-206ENST00000588954 DHX29Q7Z478 1369 aaKnown RBP13.99□□□□□ -0.17
ZNF440-206ENST00000588954 CROCC2H7BZ55 1655 aa13.99□□□□□ -0.17
ZNF440-206ENST00000588954 REREQ9P2R6 1566 aa13.99□□□□□ -0.17
ZNF440-206ENST00000588954 MLECQ14165 292 aa13.98□□□□□ -0.17
ZNF440-206ENST00000588954 ADGBQ8N7X0 1667 aa13.98□□□□□ -0.17
ZNF440-206ENST00000588954 KIF15Q9NS87 1388 aa13.97□□□□□ -0.17
ZNF440-206ENST00000588954 PLXNC1O60486 1568 aa13.96□□□□□ -0.17
ZNF440-206ENST00000588954 AGLP35573 1532 aa13.96□□□□□ -0.17
ZNF440-206ENST00000588954 ESF1Q9H501 851 aaKnown RBP13.96□□□□□ -0.17
ZNF440-206ENST00000588954 NCOA1Q15788 1441 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms