RNA–Protein interactions for RNA: ENST00000588735.2

GFAP-214, Transcript of glial fibrillary acidic protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFAP, Length 6,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-214ENST00000588735 SETQ01105 290 aaPredicted RBP16.23■□□□□ 0.19
GFAP-214ENST00000588735 KIAA1211Q6ZU35 1233 aa16.23■□□□□ 0.19
GFAP-214ENST00000588735 G3V3G9 751 aa16.2■□□□□ 0.18
GFAP-214ENST00000588735 DCAF8Q5TAQ9 597 aa16.2■□□□□ 0.18
GFAP-214ENST00000588735 SIN3AQ96ST3 1273 aa16.2■□□□□ 0.18
GFAP-214ENST00000588735 CDCA8Q53HL2 280 aa16.19■□□□□ 0.18
GFAP-214ENST00000588735 MS4A1P11836 297 aa16.18■□□□□ 0.18
GFAP-214ENST00000588735 PES1O00541 588 aaKnown RBP16.18■□□□□ 0.18
GFAP-214ENST00000588735 CHMP3Q9Y3E7 222 aa16.16■□□□□ 0.18
GFAP-214ENST00000588735 MARCH6O60337 910 aa16.16■□□□□ 0.18
GFAP-214ENST00000588735 CNKSR2Q8WXI2 1034 aa16.16■□□□□ 0.18
GFAP-214ENST00000588735 CARD11Q9BXL7 1154 aa16.16■□□□□ 0.18
GFAP-214ENST00000588735 TPM3P06753 285 aa16.15■□□□□ 0.18
GFAP-214ENST00000588735 HTATSF1O43719 755 aaKnown RBP16.15■□□□□ 0.18
GFAP-214ENST00000588735 GORABQ5T7V8 394 aa16.15■□□□□ 0.18
GFAP-214ENST00000588735 MTUS2Q5JR59 1369 aa16.15■□□□□ 0.18
GFAP-214ENST00000588735 RTF1Q92541 710 aaKnown RBP16.14■□□□□ 0.17
GFAP-214ENST00000588735 NOL8Q76FK4 1167 aaKnown RBP16.13■□□□□ 0.17
GFAP-214ENST00000588735 CLIP1P30622 1438 aa16.13■□□□□ 0.17
GFAP-214ENST00000588735 CCDC9Q9Y3X0 531 aaKnown RBP16.12■□□□□ 0.17
GFAP-214ENST00000588735 TAF7LQ5H9L4 462 aa16.12■□□□□ 0.17
GFAP-214ENST00000588735 CCAR2Q8N163 923 aaKnown RBP16.12■□□□□ 0.17
GFAP-214ENST00000588735 GBP4Q96PP9 640 aa16.11■□□□□ 0.17
GFAP-214ENST00000588735 SLKQ9H2G2 1235 aaPredicted RBP16.11■□□□□ 0.17
GFAP-214ENST00000588735 PTMSP20962 102 aa16.1■□□□□ 0.17
GFAP-214ENST00000588735 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
GFAP-214ENST00000588735 TOMM22Q9NS69 142 aa16.1■□□□□ 0.17
GFAP-214ENST00000588735 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
GFAP-214ENST00000588735 USP35Q9P2H5 1018 aa16.09■□□□□ 0.17
GFAP-214ENST00000588735 CSB-PGBD3P0DP91 1061 aa16.09■□□□□ 0.17
GFAP-214ENST00000588735 SYAP1Q96A49 352 aaPredicted RBP16.09■□□□□ 0.17
GFAP-214ENST00000588735 SAFB2Q14151 953 aaKnown RBP eCLIP16.08■□□□□ 0.16
GFAP-214ENST00000588735 CCDC34Q96HJ3 373 aa16.07■□□□□ 0.16
GFAP-214ENST00000588735 TPD52L1Q16890 204 aaPredicted RBP16.07■□□□□ 0.16
GFAP-214ENST00000588735 CEP162Q5TB80 1403 aa16.07■□□□□ 0.16
GFAP-214ENST00000588735 PAK3O75914 559 aaPredicted RBP16.06■□□□□ 0.16
GFAP-214ENST00000588735 RRP12Q5JTH9 1297 aaKnown RBP16.06■□□□□ 0.16
GFAP-214ENST00000588735 FOXD4L5Q5VV16 416 aaPredicted RBP16.06■□□□□ 0.16
GFAP-214ENST00000588735 FOXD4L4Q8WXT5 416 aaPredicted RBP16.06■□□□□ 0.16
GFAP-214ENST00000588735 TRIM6-TRIM34B2RNG4 842 aa16.05■□□□□ 0.16
GFAP-214ENST00000588735 SRPK2P78362 688 aaKnown RBP16.04■□□□□ 0.16
GFAP-214ENST00000588735 VSIG10Q8N0Z9 540 aa16.04■□□□□ 0.16
GFAP-214ENST00000588735 FRAT2O75474 233 aaPredicted RBP16.03■□□□□ 0.16
GFAP-214ENST00000588735 MLECQ14165 292 aa16.03■□□□□ 0.16
GFAP-214ENST00000588735 RAD21O60216 631 aa16.02■□□□□ 0.16
GFAP-214ENST00000588735 CFAP44Q96MT7 982 aa16.02■□□□□ 0.16
GFAP-214ENST00000588735 ITPRIPQ8IWB1 547 aa16.02■□□□□ 0.15
GFAP-214ENST00000588735 IPO9Q96P70 1041 aaKnown RBP16.01■□□□□ 0.15
GFAP-214ENST00000588735 TCEAL9Q9UHQ7 104 aa16.01■□□□□ 0.15
GFAP-214ENST00000588735 MFAP1P55081 439 aaKnown RBP16■□□□□ 0.15
GFAP-214ENST00000588735 HSP90AA2PQ14568 343 aaPredicted RBP16■□□□□ 0.15
GFAP-214ENST00000588735 TSR1Q2NL82 804 aaKnown RBP16■□□□□ 0.15
GFAP-214ENST00000588735 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16■□□□□ 0.156e-9■■■■■ 134.6
GFAP-214ENST00000588735 GOLGA6L3A6NEY3 463 aa16■□□□□ 0.15
GFAP-214ENST00000588735 SF3A1Q15459 793 aaKnown RBP15.99■□□□□ 0.15
GFAP-214ENST00000588735 GPATCH3Q96I76 525 aa15.99■□□□□ 0.15
GFAP-214ENST00000588735 MORC1Q86VD1 984 aa15.98■□□□□ 0.15
GFAP-214ENST00000588735 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
GFAP-214ENST00000588735 PCMTD1Q96MG8 357 aaPredicted RBP15.97■□□□□ 0.15
GFAP-214ENST00000588735 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
GFAP-214ENST00000588735 CSPP1Q1MSJ5 1256 aa15.97■□□□□ 0.15
GFAP-214ENST00000588735 TIMELESSQ9UNS1 1208 aa15.97■□□□□ 0.15
GFAP-214ENST00000588735 SCRIBQ14160 1630 aa15.96■□□□□ 0.15
GFAP-214ENST00000588735 TPM2P07951 284 aa15.96■□□□□ 0.15
GFAP-214ENST00000588735 ZNF771Q7L3S4 317 aaPredicted RBP15.96■□□□□ 0.15
GFAP-214ENST00000588735 PLEKHD1A6NEE1 506 aa15.95■□□□□ 0.14
GFAP-214ENST00000588735 CALD1Q05682 793 aaKnown RBP15.95■□□□□ 0.14
GFAP-214ENST00000588735 CCER2I3L3R5 266 aa15.95■□□□□ 0.14
GFAP-214ENST00000588735 CCDC70Q6NSX1 233 aa15.95■□□□□ 0.14
GFAP-214ENST00000588735 ZNF592Q92610 1267 aa15.94■□□□□ 0.14
GFAP-214ENST00000588735 CTDP1Q9Y5B0 961 aaPredicted RBP15.94■□□□□ 0.14
GFAP-214ENST00000588735 STK26Q9P289 416 aa15.94■□□□□ 0.14
GFAP-214ENST00000588735 GTF2E1P29083 439 aaPredicted RBP15.93■□□□□ 0.14
GFAP-214ENST00000588735 FOXD4L6Q3SYB3 417 aaPredicted RBP15.92■□□□□ 0.14
GFAP-214ENST00000588735 FOXD4L3Q6VB84 417 aaPredicted RBP15.92■□□□□ 0.14
GFAP-214ENST00000588735 IPO8O15397 1037 aaKnown RBP15.92■□□□□ 0.14
GFAP-214ENST00000588735 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.91■□□□□ 0.14
GFAP-214ENST00000588735 H3BQV1 296 aa15.91■□□□□ 0.14
GFAP-214ENST00000588735 IFFO2Q5TF58 517 aa15.91■□□□□ 0.14
GFAP-214ENST00000588735 SLC4A10Q6U841 1118 aa15.91■□□□□ 0.14
GFAP-214ENST00000588735 TCERG1O14776 1098 aaKnown RBP15.91■□□□□ 0.14
GFAP-214ENST00000588735 SLC4A3P48751 1232 aa15.9■□□□□ 0.14
GFAP-214ENST00000588735 GPS2Q13227 327 aa15.9■□□□□ 0.14
GFAP-214ENST00000588735 KIF16BQ96L93 1317 aa15.9■□□□□ 0.14
GFAP-214ENST00000588735 MSH5O43196 834 aa15.89■□□□□ 0.13
GFAP-214ENST00000588735 CWC22Q9HCG8 908 aaKnown RBP15.89■□□□□ 0.13
GFAP-214ENST00000588735 RSPH6AQ9H0K4 717 aa15.89■□□□□ 0.13
GFAP-214ENST00000588735 TMF1P82094 1093 aa15.89■□□□□ 0.13
GFAP-214ENST00000588735 TPM1P09493 284 aa15.89■□□□□ 0.13
GFAP-214ENST00000588735 RCAN3Q9UKA8 241 aa15.89■□□□□ 0.13
GFAP-214ENST00000588735 GOLGA3Q08378 1498 aa15.89■□□□□ 0.13
GFAP-214ENST00000588735 TRIM34Q9BYJ4 488 aa15.88■□□□□ 0.13
GFAP-214ENST00000588735 PHF14O94880 888 aa15.87■□□□□ 0.13
GFAP-214ENST00000588735 HSPA5P11021 654 aaKnown RBP15.87■□□□□ 0.13
GFAP-214ENST00000588735 AKAP17AQ02040 695 aaKnown RBP15.87■□□□□ 0.13
GFAP-214ENST00000588735 GOLGA6L19H0YKK7 550 aa15.86■□□□□ 0.13
GFAP-214ENST00000588735 RWDD1Q9H446 243 aaPredicted RBP15.86■□□□□ 0.13
GFAP-214ENST00000588735 STK31Q9BXU1 1019 aa15.86■□□□□ 0.13
GFAP-214ENST00000588735 CFDP1Q9UEE9 299 aaPredicted RBP15.86■□□□□ 0.13
GFAP-214ENST00000588735 SAMD1Q6SPF0 538 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms