RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 MYO5CQ9NQX4 1742 aa13.24□□□□□ -0.29
NFIX-211ENST00000588680 MLECQ14165 292 aa13.23□□□□□ -0.29
NFIX-211ENST00000588680 CDK13Q14004 1512 aaKnown RBP13.23□□□□□ -0.29
NFIX-211ENST00000588680 ILDR2Q71H61 639 aa13.22□□□□□ -0.29
NFIX-211ENST00000588680 PLEKHD1A6NEE1 506 aa13.21□□□□□ -0.29
NFIX-211ENST00000588680 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.29
NFIX-211ENST00000588680 C9orf84Q5VXU9 1444 aa13.21□□□□□ -0.3
NFIX-211ENST00000588680 RANGAP1P46060 587 aaPredicted RBP13.2□□□□□ -0.3
NFIX-211ENST00000588680 SCAPERQ9BY12 1400 aa13.19□□□□□ -0.3
NFIX-211ENST00000588680 ATP10AO60312 1499 aa13.18□□□□□ -0.3
NFIX-211ENST00000588680 SOCS7O14512 581 aa13.18□□□□□ -0.3
NFIX-211ENST00000588680 C3P01024 1663 aa13.17□□□□□ -0.3
NFIX-211ENST00000588680 PLCH2O75038 1416 aa13.16□□□□□ -0.3
NFIX-211ENST00000588680 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
NFIX-211ENST00000588680 KIF14Q15058 1648 aa13.16□□□□□ -0.3
NFIX-211ENST00000588680 KDM5CP41229 1560 aa13.15□□□□□ -0.3
NFIX-211ENST00000588680 DIP2CQ9Y2E4 1556 aa13.15□□□□□ -0.3
NFIX-211ENST00000588680 UHRF1BP1Q6BDS2 1440 aa13.15□□□□□ -0.3
NFIX-211ENST00000588680 ABCA6Q8N139 1617 aa13.14□□□□□ -0.31
NFIX-211ENST00000588680 CEBPAP49715 358 aaPredicted RBP13.14□□□□□ -0.31
NFIX-211ENST00000588680 ZNF518AQ6AHZ1 1483 aa13.13□□□□□ -0.31
NFIX-211ENST00000588680 REREQ9P2R6 1566 aa13.12□□□□□ -0.31
NFIX-211ENST00000588680 LTBP4Q8N2S1 1624 aa13.11□□□□□ -0.31
NFIX-211ENST00000588680 ARHGAP5Q13017 1502 aa13.11□□□□□ -0.31
NFIX-211ENST00000588680 LRRIQ1Q96JM4 1722 aa13.1□□□□□ -0.31
NFIX-211ENST00000588680 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
NFIX-211ENST00000588680 PTPRTO14522 1441 aa13.1□□□□□ -0.31
NFIX-211ENST00000588680 EEA1Q15075 1411 aa13.1□□□□□ -0.31
NFIX-211ENST00000588680 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
NFIX-211ENST00000588680 IQSEC2Q5JU85 1478 aa13.08□□□□□ -0.32
NFIX-211ENST00000588680 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
NFIX-211ENST00000588680 EFCAB2Q5VUJ9 269 aa13.07□□□□□ -0.32
NFIX-211ENST00000588680 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
NFIX-211ENST00000588680 NCOA1Q15788 1441 aa13.05□□□□□ -0.32
NFIX-211ENST00000588680 ABCC1P33527 1531 aa13.05□□□□□ -0.32
NFIX-211ENST00000588680 AGLP35573 1532 aa13.05□□□□□ -0.32
NFIX-211ENST00000588680 MROH2AA6NES4 1674 aa13.05□□□□□ -0.32
NFIX-211ENST00000588680 SUPT6HQ7KZ85 1726 aaKnown RBP13.04□□□□□ -0.32
NFIX-211ENST00000588680 KIDINS220Q9ULH0 1771 aa13.04□□□□□ -0.32
NFIX-211ENST00000588680 TROQ12816 1431 aaPredicted RBP13.04□□□□□ -0.32
NFIX-211ENST00000588680 AFAP1Q8N556 730 aa13.03□□□□□ -0.32
NFIX-211ENST00000588680 FMN1Q68DA7 1419 aa13.03□□□□□ -0.32
NFIX-211ENST00000588680 MLH3Q9UHC1 1453 aa13.03□□□□□ -0.32
NFIX-211ENST00000588680 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.32
NFIX-211ENST00000588680 MYT1LQ9UL68 1186 aa13.02□□□□□ -0.33
NFIX-211ENST00000588680 CLIP1P30622 1438 aa13.02□□□□□ -0.33
NFIX-211ENST00000588680 TRAPPC8Q9Y2L5 1435 aa13.02□□□□□ -0.33
NFIX-211ENST00000588680 ZNF142P52746 1687 aaPredicted RBP13.02□□□□□ -0.33
NFIX-211ENST00000588680 MYO3AQ8NEV4 1616 aa13.01□□□□□ -0.33
NFIX-211ENST00000588680 CDC42BPAQ5VT25 1732 aa13.01□□□□□ -0.33
NFIX-211ENST00000588680 ARHGAP35Q9NRY4 1499 aa13□□□□□ -0.33
NFIX-211ENST00000588680 ATP1B4Q9UN42 357 aaPredicted RBP13□□□□□ -0.33
NFIX-211ENST00000588680 CNTLNQ9NXG0 1405 aa12.99□□□□□ -0.33
NFIX-211ENST00000588680 CDK11AQ9UQ88 783 aaPredicted RBP12.98□□□□□ -0.33
NFIX-211ENST00000588680 CLTCQ00610 1675 aaKnown RBP12.98□□□□□ -0.33
NFIX-211ENST00000588680 ESF1Q9H501 851 aaKnown RBP12.97□□□□□ -0.33
NFIX-211ENST00000588680 NPATQ14207 1427 aa12.96□□□□□ -0.33
NFIX-211ENST00000588680 SAMD9LQ8IVG5 1584 aa12.96□□□□□ -0.33
NFIX-211ENST00000588680 CEP170BQ9Y4F5 1589 aaPredicted RBP12.94□□□□□ -0.34
NFIX-211ENST00000588680 ZNF335Q9H4Z2 1342 aaPredicted RBP12.94□□□□□ -0.34
NFIX-211ENST00000588680 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
NFIX-211ENST00000588680 PLXNC1O60486 1568 aa12.93□□□□□ -0.34
NFIX-211ENST00000588680 MED1Q15648 1581 aaPredicted RBP12.93□□□□□ -0.34
NFIX-211ENST00000588680 PLA2R1Q13018 1463 aa12.92□□□□□ -0.34
NFIX-211ENST00000588680 UBAP1LF5GYI3 381 aa12.92□□□□□ -0.34
NFIX-211ENST00000588680 POLR1AO95602 1720 aaPredicted RBP12.92□□□□□ -0.34
NFIX-211ENST00000588680 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
NFIX-211ENST00000588680 INO80Q9ULG1 1556 aaPredicted RBP12.92□□□□□ -0.34
NFIX-211ENST00000588680 TCOF1Q13428 1488 aaKnown RBP12.91□□□□□ -0.34
NFIX-211ENST00000588680 NCKAP5LQ9HCH0 1330 aa12.91□□□□□ -0.34
NFIX-211ENST00000588680 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
NFIX-211ENST00000588680 ATP7AQ04656 1500 aa12.9□□□□□ -0.34
NFIX-211ENST00000588680 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
NFIX-211ENST00000588680 ZMYM3Q14202 1370 aa12.89□□□□□ -0.35
NFIX-211ENST00000588680 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
NFIX-211ENST00000588680 ADGBQ8N7X0 1667 aa12.86□□□□□ -0.35
NFIX-211ENST00000588680 CASKIN1Q8WXD9 1431 aa12.86□□□□□ -0.35
NFIX-211ENST00000588680 NEURL4Q96JN8 1562 aa12.86□□□□□ -0.35
NFIX-211ENST00000588680 DNMT1P26358 1616 aaKnown RBP12.85□□□□□ -0.35
NFIX-211ENST00000588680 A2MP01023 1474 aa12.85□□□□□ -0.35
NFIX-211ENST00000588680 PKD2Q13563 968 aa12.84□□□□□ -0.35
NFIX-211ENST00000588680 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
NFIX-211ENST00000588680 FYCO1Q9BQS8 1478 aa12.84□□□□□ -0.35
NFIX-211ENST00000588680 PPP6R1Q9UPN7 881 aa12.83□□□□□ -0.36
NFIX-211ENST00000588680 A2ML1A8K2U0 1454 aa12.83□□□□□ -0.36
NFIX-211ENST00000588680 GPATCH8Q9UKJ3 1502 aaKnown RBP12.83□□□□□ -0.36
NFIX-211ENST00000588680 ZNF777Q9ULD5 760 aaPredicted RBP12.82□□□□□ -0.36
NFIX-211ENST00000588680 CPS1P31327 1500 aa12.82□□□□□ -0.36
NFIX-211ENST00000588680 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
NFIX-211ENST00000588680 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
NFIX-211ENST00000588680 HSPA1LP34931 641 aa12.8□□□□□ -0.36
NFIX-211ENST00000588680 ALKQ9UM73 1620 aa12.79□□□□□ -0.36
NFIX-211ENST00000588680 KIAA1107Q9UPP5 1409 aa12.79□□□□□ -0.36
NFIX-211ENST00000588680 VWDEQ8N2E2 1590 aa12.78□□□□□ -0.36
NFIX-211ENST00000588680 HNRNPMP52272 730 aaKnown RBP eCLIP12.78□□□□□ -0.36
NFIX-211ENST00000588680 PIP4K2BP78356 416 aa12.78□□□□□ -0.36
NFIX-211ENST00000588680 SHANK2Q9UPX8 1470 aa12.78□□□□□ -0.36
NFIX-211ENST00000588680 GGT6Q6P531 493 aa12.77□□□□□ -0.37
NFIX-211ENST00000588680 TIAM1Q13009 1591 aa12.76□□□□□ -0.37
NFIX-211ENST00000588680 STRCP1A6NGW2 1772 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms