RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 NAIPQ13075 1403 aa24.95■■□□□ 1.58
NFIX-209ENST00000587760 GCC2Q8IWJ2 1684 aa24.94■■□□□ 1.58
NFIX-209ENST00000587760 PREX2Q70Z35 1606 aa24.9■■□□□ 1.58
NFIX-209ENST00000587760 ABCC5O15440 1437 aa24.9■■□□□ 1.58
NFIX-209ENST00000587760 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.85■■□□□ 1.57
NFIX-209ENST00000587760 ZNF644Q9H582 1327 aaPredicted RBP24.85■■□□□ 1.57
NFIX-209ENST00000587760 CROCC2H7BZ55 1655 aa24.85■■□□□ 1.57
NFIX-209ENST00000587760 SHANK2Q9UPX8 1470 aa24.84■■□□□ 1.57
NFIX-209ENST00000587760 RSPH4AQ5TD94 716 aa24.84■■□□□ 1.57
NFIX-209ENST00000587760 MYO5CQ9NQX4 1742 aa24.83■■□□□ 1.57
NFIX-209ENST00000587760 ZNF777Q9ULD5 760 aaPredicted RBP24.83■■□□□ 1.57
NFIX-209ENST00000587760 ADGBQ8N7X0 1667 aa24.83■■□□□ 1.57
NFIX-209ENST00000587760 ARHGEF5Q12774 1597 aa24.83■■□□□ 1.57
NFIX-209ENST00000587760 ADGRL2O95490 1459 aa24.82■■□□□ 1.56
NFIX-209ENST00000587760 PLEKHH2Q8IVE3 1493 aa24.82■■□□□ 1.56
NFIX-209ENST00000587760 CHIC2Q9UKJ5 165 aa24.82■■□□□ 1.56
NFIX-209ENST00000587760 CDC42BPBQ9Y5S2 1711 aa24.81■■□□□ 1.56
NFIX-209ENST00000587760 TTC37Q6PGP7 1564 aa24.81■■□□□ 1.56
NFIX-209ENST00000587760 WDR7Q9Y4E6 1490 aa24.8■■□□□ 1.56
NFIX-209ENST00000587760 MAPKBP1O60336 1514 aa24.8■■□□□ 1.56
NFIX-209ENST00000587760 RRP7BPQ9NSQ0 103 aa24.79■■□□□ 1.56
NFIX-209ENST00000587760 ARHGAP5Q13017 1502 aa24.78■■□□□ 1.56
NFIX-209ENST00000587760 ANKRD30AQ9BXX3 1397 aa24.78■■□□□ 1.56
NFIX-209ENST00000587760 ARAP3Q8WWN8 1544 aa24.77■■□□□ 1.56
NFIX-209ENST00000587760 NPM1P06748 294 aaKnown RBP eCLIP24.77■■□□□ 1.56
NFIX-209ENST00000587760 PLCH2O75038 1416 aa24.76■■□□□ 1.55
NFIX-209ENST00000587760 SAMD9LQ8IVG5 1584 aa24.74■■□□□ 1.55
NFIX-209ENST00000587760 NCOA1Q15788 1441 aa24.74■■□□□ 1.55
NFIX-209ENST00000587760 KIAA1107Q9UPP5 1409 aa24.74■■□□□ 1.55
NFIX-209ENST00000587760 TSPY4P0CV99 314 aa24.74■■□□□ 1.55
NFIX-209ENST00000587760 TSPY10P0CW01 314 aa24.74■■□□□ 1.55
NFIX-209ENST00000587760 KCNH8Q96L42 1107 aa24.73■■□□□ 1.55
NFIX-209ENST00000587760 CCDC141Q6ZP82 1450 aa24.72■■□□□ 1.55
NFIX-209ENST00000587760 TIMELESSQ9UNS1 1208 aa24.72■■□□□ 1.55
NFIX-209ENST00000587760 C9orf84Q5VXU9 1444 aa24.71■■□□□ 1.55
NFIX-209ENST00000587760 MBD5Q9P267 1494 aa24.71■■□□□ 1.55
NFIX-209ENST00000587760 EFCAB2Q5VUJ9 269 aa24.7■■□□□ 1.55
NFIX-209ENST00000587760 ASXL2Q76L83 1435 aa24.67■■□□□ 1.54
NFIX-209ENST00000587760 ABCA9Q8IUA7 1624 aa24.67■■□□□ 1.54
NFIX-209ENST00000587760 MAST1Q9Y2H9 1570 aa24.66■■□□□ 1.54
NFIX-209ENST00000587760 TRIM52Q96A61 297 aa24.64■■□□□ 1.53
NFIX-209ENST00000587760 SYCP2Q9BX26 1530 aa24.63■■□□□ 1.53
NFIX-209ENST00000587760 HNRNPMP52272 730 aaKnown RBP eCLIP24.63■■□□□ 1.532e-6■■■■□ 21.1
NFIX-209ENST00000587760 KDM6BO15054 1643 aa24.62■■□□□ 1.53
NFIX-209ENST00000587760 ANKRD50Q9ULJ7 1429 aa24.59■■□□□ 1.53
NFIX-209ENST00000587760 ABCC1P33527 1531 aa24.59■■□□□ 1.53
NFIX-209ENST00000587760 KIF15Q9NS87 1388 aa24.56■■□□□ 1.52
NFIX-209ENST00000587760 MPHOSPH9Q99550 1183 aa24.55■■□□□ 1.52
NFIX-209ENST00000587760 PLXNC1O60486 1568 aa24.55■■□□□ 1.52
NFIX-209ENST00000587760 RIMBP3CA6NJZ7 1639 aa24.52■■□□□ 1.52
NFIX-209ENST00000587760 RIMBP3BA6NNM3 1639 aa24.52■■□□□ 1.52
NFIX-209ENST00000587760 RIMBP3Q9UFD9 1639 aa24.52■■□□□ 1.52
NFIX-209ENST00000587760 FANCAO15360 1455 aa24.52■■□□□ 1.52
NFIX-209ENST00000587760 ZNF316A6NFI3 1004 aaPredicted RBP24.51■■□□□ 1.51
NFIX-209ENST00000587760 CFAP74Q9C0B2 1584 aa24.51■■□□□ 1.51
NFIX-209ENST00000587760 RTEL1-TNFRSF6BF6WH68 1400 aa24.49■■□□□ 1.51
NFIX-209ENST00000587760 ARHGEF12Q9NZN5 1544 aa24.49■■□□□ 1.51
NFIX-209ENST00000587760 NEUROD1Q13562 356 aa24.48■■□□□ 1.51
NFIX-209ENST00000587760 SIN3AQ96ST3 1273 aa24.48■■□□□ 1.51
NFIX-209ENST00000587760 KDM5DQ9BY66 1539 aa24.48■■□□□ 1.51
NFIX-209ENST00000587760 SLC4A1APQ9BWU0 796 aaKnown RBP24.47■■□□□ 1.51
NFIX-209ENST00000587760 TONSLQ96HA7 1378 aa24.47■■□□□ 1.51
NFIX-209ENST00000587760 DUOX2Q9NRD8 1548 aa24.46■■□□□ 1.51
NFIX-209ENST00000587760 DENND4BO75064 1496 aaPredicted RBP24.46■■□□□ 1.51
NFIX-209ENST00000587760 PZPP20742 1482 aa24.44■■□□□ 1.5
NFIX-209ENST00000587760 ADGRL1O94910 1474 aa24.43■■□□□ 1.5
NFIX-209ENST00000587760 CD109Q6YHK3 1445 aa24.42■■□□□ 1.5
NFIX-209ENST00000587760 ERBINQ96RT1 1412 aa24.42■■□□□ 1.5
NFIX-209ENST00000587760 TRAPPC8Q9Y2L5 1435 aa24.42■■□□□ 1.5
NFIX-209ENST00000587760 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
NFIX-209ENST00000587760 SPAG9O60271 1321 aaKnown RBP24.4■■□□□ 1.5
NFIX-209ENST00000587760 ANKRD30BQ9BXX2 1392 aa24.39■■□□□ 1.5
NFIX-209ENST00000587760 NUP155O75694 1391 aa24.38■■□□□ 1.49
NFIX-209ENST00000587760 UNC13BO14795 1591 aa24.37■■□□□ 1.49
NFIX-209ENST00000587760 SCAPERQ9BY12 1400 aa24.36■■□□□ 1.49
NFIX-209ENST00000587760 PPP1R15AO75807 674 aaPredicted RBP24.36■■□□□ 1.49
NFIX-209ENST00000587760 ZFYVE16Q7Z3T8 1539 aa24.36■■□□□ 1.49
NFIX-209ENST00000587760 GLI2P10070 1586 aa24.35■■□□□ 1.49
NFIX-209ENST00000587760 NEO1Q92859 1461 aa24.35■■□□□ 1.49
NFIX-209ENST00000587760 INO80Q9ULG1 1556 aaPredicted RBP24.34■■□□□ 1.49
NFIX-209ENST00000587760 RPRD2Q5VT52 1461 aaKnown RBP24.33■■□□□ 1.49
NFIX-209ENST00000587760 ZNF518AQ6AHZ1 1483 aa24.33■■□□□ 1.49
NFIX-209ENST00000587760 ATP7AQ04656 1500 aa24.32■■□□□ 1.48
NFIX-209ENST00000587760 PKD2Q13563 968 aa24.3■■□□□ 1.48
NFIX-209ENST00000587760 AFAP1Q8N556 730 aa24.29■■□□□ 1.48
NFIX-209ENST00000587760 MAGI2Q86UL8 1455 aa24.28■■□□□ 1.48
NFIX-209ENST00000587760 FAM135AQ9P2D6 1515 aa24.28■■□□□ 1.48
NFIX-209ENST00000587760 MAP3K4Q9Y6R4 1608 aa24.27■■□□□ 1.48
NFIX-209ENST00000587760 IQGAP3Q86VI3 1631 aa24.27■■□□□ 1.48
NFIX-209ENST00000587760 DIEXFQ68CQ4 756 aaKnown RBP24.26■■□□□ 1.47
NFIX-209ENST00000587760 POGZQ7Z3K3 1410 aa24.24■■□□□ 1.47
NFIX-209ENST00000587760 FOXD1Q16676 465 aa24.24■■□□□ 1.47
NFIX-209ENST00000587760 EIF2AK4Q9P2K8 1649 aaKnown RBP24.23■■□□□ 1.47
NFIX-209ENST00000587760 KDM5CP41229 1560 aa24.23■■□□□ 1.47
NFIX-209ENST00000587760 MLH3Q9UHC1 1453 aa24.21■■□□□ 1.47
NFIX-209ENST00000587760 MYT1LQ9UL68 1186 aa24.19■■□□□ 1.46
NFIX-209ENST00000587760 DIP2BQ9P265 1576 aa24.19■■□□□ 1.46
NFIX-209ENST00000587760 DHX29Q7Z478 1369 aaKnown RBP24.19■■□□□ 1.46
NFIX-209ENST00000587760 KIDINS220Q9ULH0 1771 aa24.17■■□□□ 1.46
NFIX-209ENST00000587760 DEPDC5O75140 1603 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms