RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 RPRD2Q5VT52 1461 aaKnown RBP22.42■■□□□ 1.18
RANBP3-209ENST00000587411 DEKP35659 375 aaKnown RBP22.42■■□□□ 1.18
RANBP3-209ENST00000587411 POLR1AO95602 1720 aaPredicted RBP22.41■■□□□ 1.18
RANBP3-209ENST00000587411 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
RANBP3-209ENST00000587411 TEX14Q8IWB6 1497 aa22.38■■□□□ 1.17
RANBP3-209ENST00000587411 KIF7Q2M1P5 1343 aa22.38■■□□□ 1.17
RANBP3-209ENST00000587411 ANKRD30BQ9BXX2 1392 aa22.38■■□□□ 1.17
RANBP3-209ENST00000587411 GAPVD1Q14C86 1478 aa22.35■■□□□ 1.17
RANBP3-209ENST00000587411 ROCK1Q13464 1354 aa22.35■■□□□ 1.17
RANBP3-209ENST00000587411 RNF123Q5XPI4 1314 aa22.35■■□□□ 1.17
RANBP3-209ENST00000587411 NBPF8Q3BBV2 869 aa22.34■■□□□ 1.17
RANBP3-209ENST00000587411 NUDCQ9Y266 331 aa22.32■■□□□ 1.16
RANBP3-209ENST00000587411 EPRSP07814 1512 aaKnown RBP22.31■■□□□ 1.16
RANBP3-209ENST00000587411 TDRD9Q8NDG6 1382 aaKnown RBP22.3■■□□□ 1.16
RANBP3-209ENST00000587411 URB2Q14146 1524 aaKnown RBP22.3■■□□□ 1.16
RANBP3-209ENST00000587411 NESP48681 1621 aa22.29■■□□□ 1.16
RANBP3-209ENST00000587411 ANP32AP39687 249 aaKnown RBP22.28■■□□□ 1.16
RANBP3-209ENST00000587411 LAMC3Q9Y6N6 1575 aa22.28■■□□□ 1.16
RANBP3-209ENST00000587411 FOXD1Q16676 465 aa22.28■■□□□ 1.16
RANBP3-209ENST00000587411 CCDC136Q96JN2 1154 aa22.26■■□□□ 1.15
RANBP3-209ENST00000587411 DHX29Q7Z478 1369 aaKnown RBP22.26■■□□□ 1.15
RANBP3-209ENST00000587411 DAPK1P53355 1430 aa22.26■■□□□ 1.15
RANBP3-209ENST00000587411 PAK3O75914 559 aaPredicted RBP22.25■■□□□ 1.15
RANBP3-209ENST00000587411 IPO9Q96P70 1041 aaKnown RBP22.25■■□□□ 1.15
RANBP3-209ENST00000587411 ARID4BQ4LE39 1312 aaPredicted RBP22.24■■□□□ 1.15
RANBP3-209ENST00000587411 DNMT1P26358 1616 aaKnown RBP22.21■■□□□ 1.15
RANBP3-209ENST00000587411 WDR62O43379 1518 aa22.21■■□□□ 1.15
RANBP3-209ENST00000587411 NBR1Q14596 966 aa22.21■■□□□ 1.15
RANBP3-209ENST00000587411 CDK13Q14004 1512 aaKnown RBP22.2■■□□□ 1.14
RANBP3-209ENST00000587411 SLC4A1APQ9BWU0 796 aaKnown RBP22.2■■□□□ 1.14
RANBP3-209ENST00000587411 ABCC5O15440 1437 aa22.19■■□□□ 1.14
RANBP3-209ENST00000587411 MBD5Q9P267 1494 aa22.19■■□□□ 1.14
RANBP3-209ENST00000587411 IQGAP2Q13576 1575 aa22.18■■□□□ 1.14
RANBP3-209ENST00000587411 ZBTB47Q9UFB7 747 aaPredicted RBP22.17■■□□□ 1.14
RANBP3-209ENST00000587411 RTL5Q5HYW3 569 aaPredicted RBP22.16■■□□□ 1.14
RANBP3-209ENST00000587411 ROCK2O75116 1388 aaKnown RBP22.15■■□□□ 1.14
RANBP3-209ENST00000587411 USP47Q96K76 1375 aa22.15■■□□□ 1.14
RANBP3-209ENST00000587411 PZPP20742 1482 aa22.12■■□□□ 1.13
RANBP3-209ENST00000587411 PNISRQ8TF01 805 aaKnown RBP22.12■■□□□ 1.13
RANBP3-209ENST00000587411 KIF14Q15058 1648 aa22.12■■□□□ 1.13
RANBP3-209ENST00000587411 BCORL1Q5H9F3 1711 aa22.11■■□□□ 1.13
RANBP3-209ENST00000587411 KDM5CP41229 1560 aa22.09■■□□□ 1.13
RANBP3-209ENST00000587411 KIAA1107Q9UPP5 1409 aa22.08■■□□□ 1.12
RANBP3-209ENST00000587411 TMC1Q8TDI8 760 aa22.08■■□□□ 1.12
RANBP3-209ENST00000587411 KTN1Q86UP2 1357 aaKnown RBP22.08■■□□□ 1.12
RANBP3-209ENST00000587411 TARBP1Q13395 1621 aaKnown RBP22.07■■□□□ 1.12
RANBP3-209ENST00000587411 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
RANBP3-209ENST00000587411 LRPPRCP42704 1394 aaKnown RBP22.06■■□□□ 1.12
RANBP3-209ENST00000587411 KIF15Q9NS87 1388 aa22.05■■□□□ 1.12
RANBP3-209ENST00000587411 BRD4O60885 1362 aaPredicted RBP22.04■■□□□ 1.12
RANBP3-209ENST00000587411 UHRF1BP1Q6BDS2 1440 aa22.04■■□□□ 1.12
RANBP3-209ENST00000587411 TCERG1O14776 1098 aaKnown RBP22.03■■□□□ 1.12
RANBP3-209ENST00000587411 POLR3GLQ9BT43 218 aa22.03■■□□□ 1.12
RANBP3-209ENST00000587411 ADAMTS12P58397 1594 aa22.02■■□□□ 1.12
RANBP3-209ENST00000587411 PBRM1Q86U86 1689 aa22.02■■□□□ 1.12
RANBP3-209ENST00000587411 RALGAPBQ86X10 1494 aa22.02■■□□□ 1.12
RANBP3-209ENST00000587411 DNAJC5BQ9UF47 199 aa22.02■■□□□ 1.12
RANBP3-209ENST00000587411 RRP1P56182 461 aaKnown RBP22.01■■□□□ 1.11
RANBP3-209ENST00000587411 ZNF644Q9H582 1327 aaPredicted RBP22.01■■□□□ 1.11
RANBP3-209ENST00000587411 ADGBQ8N7X0 1667 aa22■■□□□ 1.11
RANBP3-209ENST00000587411 ADGRL2O95490 1459 aa21.99■■□□□ 1.11
RANBP3-209ENST00000587411 MYBBP1AQ9BQG0 1328 aaKnown RBP21.99■■□□□ 1.11
RANBP3-209ENST00000587411 RALBP1Q15311 655 aa21.99■■□□□ 1.11
RANBP3-209ENST00000587411 CNGB1Q14028 1251 aaPredicted RBP21.98■■□□□ 1.11
RANBP3-209ENST00000587411 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
RANBP3-209ENST00000587411 USP35Q9P2H5 1018 aa21.97■■□□□ 1.11
RANBP3-209ENST00000587411 MS4A1P11836 297 aa21.97■■□□□ 1.11
RANBP3-209ENST00000587411 ARHGEF12Q9NZN5 1544 aa21.97■■□□□ 1.11
RANBP3-209ENST00000587411 CAMSAP2Q08AD1 1489 aa21.96■■□□□ 1.11
RANBP3-209ENST00000587411 ZNF326Q5BKZ1 582 aaKnown RBP21.96■■□□□ 1.11
RANBP3-209ENST00000587411 NUP153P49790 1475 aaKnown RBP21.96■■□□□ 1.11
RANBP3-209ENST00000587411 PDE3BQ13370 1112 aa21.94■■□□□ 1.1
RANBP3-209ENST00000587411 PKD2Q13563 968 aa21.93■■□□□ 1.1
RANBP3-209ENST00000587411 ITSN2Q9NZM3 1697 aa21.93■■□□□ 1.1
RANBP3-209ENST00000587411 RCAN3Q9UKA8 241 aa21.93■■□□□ 1.1
RANBP3-209ENST00000587411 KIAA0556O60303 1618 aa21.93■■□□□ 1.1
RANBP3-209ENST00000587411 PRKCSHP14314 528 aaPredicted RBP21.93■■□□□ 1.1
RANBP3-209ENST00000587411 RAPGEF6Q8TEU7 1601 aa21.92■■□□□ 1.1
RANBP3-209ENST00000587411 EXOC6Q8TAG9 804 aa21.92■■□□□ 1.1
RANBP3-209ENST00000587411 PDE4AP27815 886 aa21.91■■□□□ 1.1
RANBP3-209ENST00000587411 CARD11Q9BXL7 1154 aa21.91■■□□□ 1.1
RANBP3-209ENST00000587411 ANKRD30AQ9BXX3 1397 aa21.91■■□□□ 1.1
RANBP3-209ENST00000587411 TROQ12816 1431 aaPredicted RBP21.91■■□□□ 1.1
RANBP3-209ENST00000587411 CROCC2H7BZ55 1655 aa21.9■■□□□ 1.1
RANBP3-209ENST00000587411 BACH2Q9BYV9 841 aa21.9■■□□□ 1.1
RANBP3-209ENST00000587411 CFDP1Q9UEE9 299 aaPredicted RBP21.89■■□□□ 1.1
RANBP3-209ENST00000587411 DISP1Q96F81 1524 aa21.89■■□□□ 1.09
RANBP3-209ENST00000587411 E9PCH4 1651 aa21.88■■□□□ 1.09
RANBP3-209ENST00000587411 KIAA0586Q9BVV6 1533 aa21.87■■□□□ 1.09
RANBP3-209ENST00000587411 PPM1GO15355 546 aaPredicted RBP21.87■■□□□ 1.09
RANBP3-209ENST00000587411 NPM2Q86SE8 214 aaKnown RBP21.87■■□□□ 1.09
RANBP3-209ENST00000587411 SLC24A1O60721 1099 aa21.87■■□□□ 1.09
RANBP3-209ENST00000587411 ANKRD50Q9ULJ7 1429 aa21.86■■□□□ 1.09
RANBP3-209ENST00000587411 NLRP13Q86W25 1043 aa21.85■■□□□ 1.09
RANBP3-209ENST00000587411 GPATCH8Q9UKJ3 1502 aaKnown RBP21.85■■□□□ 1.09
RANBP3-209ENST00000587411 SENP3-EIF4A1A0A087X0R7 540 aa21.84■■□□□ 1.09
RANBP3-209ENST00000587411 INSRP06213 1382 aa21.84■■□□□ 1.09
RANBP3-209ENST00000587411 NEFMP07197 916 aa21.83■■□□□ 1.09
RANBP3-209ENST00000587411 ADCY10Q96PN6 1610 aa21.83■■□□□ 1.09
RANBP3-209ENST00000587411 ST20-MTHFSA0A0A6YYL1 179 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms