RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 MAGI2Q86UL8 1455 aa27.18■■□□□ 1.94
NPC1-205ENST00000587163 POGZQ7Z3K3 1410 aa27.17■■□□□ 1.94
NPC1-205ENST00000587163 HSPA2P54652 639 aa27.15■■□□□ 1.94
NPC1-205ENST00000587163 MLECQ14165 292 aa27.15■■□□□ 1.94
NPC1-205ENST00000587163 ARHGAP35Q9NRY4 1499 aa27.13■■□□□ 1.93
NPC1-205ENST00000587163 FMN1Q68DA7 1419 aa27.12■■□□□ 1.93
NPC1-205ENST00000587163 EFCAB2Q5VUJ9 269 aa27.1■■□□□ 1.93
NPC1-205ENST00000587163 KIF14Q15058 1648 aa27.07■■□□□ 1.92
NPC1-205ENST00000587163 MYO5CQ9NQX4 1742 aa27.07■■□□□ 1.92
NPC1-205ENST00000587163 CDK11AQ9UQ88 783 aaPredicted RBP27.06■■□□□ 1.92
NPC1-205ENST00000587163 ATP10AO60312 1499 aa27.06■■□□□ 1.92
NPC1-205ENST00000587163 FER1L4A9Z1Z3 1794 aa27.05■■□□□ 1.92
NPC1-205ENST00000587163 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
NPC1-205ENST00000587163 TROQ12816 1431 aaPredicted RBP27.01■■□□□ 1.91
NPC1-205ENST00000587163 C9orf84Q5VXU9 1444 aa27.01■■□□□ 1.91
NPC1-205ENST00000587163 ARHGEF12Q9NZN5 1544 aa27■■□□□ 1.91
NPC1-205ENST00000587163 AFAP1Q8N556 730 aa27■■□□□ 1.91
NPC1-205ENST00000587163 LRRIQ1Q96JM4 1722 aa26.99■■□□□ 1.91
NPC1-205ENST00000587163 ARHGAP5Q13017 1502 aa26.97■■□□□ 1.91
NPC1-205ENST00000587163 CEBPAP49715 358 aaPredicted RBP26.97■■□□□ 1.91
NPC1-205ENST00000587163 ZNF518AQ6AHZ1 1483 aa26.96■■□□□ 1.91
NPC1-205ENST00000587163 KDM5CP41229 1560 aa26.93■■□□□ 1.9
NPC1-205ENST00000587163 CLIP1P30622 1438 aa26.93■■□□□ 1.9
NPC1-205ENST00000587163 CDC42BPBQ9Y5S2 1711 aa26.9■■□□□ 1.9
NPC1-205ENST00000587163 MYT1LQ9UL68 1186 aa26.9■■□□□ 1.9
NPC1-205ENST00000587163 CERKQ8TCT0 537 aa26.88■■□□□ 1.89
NPC1-205ENST00000587163 DIP2CQ9Y2E4 1556 aa26.88■■□□□ 1.89
NPC1-205ENST00000587163 PREX1Q8TCU6 1659 aa26.87■■□□□ 1.89
NPC1-205ENST00000587163 TRAPPC8Q9Y2L5 1435 aa26.84■■□□□ 1.89
NPC1-205ENST00000587163 CASKIN1Q8WXD9 1431 aa26.83■■□□□ 1.89
NPC1-205ENST00000587163 MLH3Q9UHC1 1453 aa26.83■■□□□ 1.89
NPC1-205ENST00000587163 ABCA6Q8N139 1617 aa26.83■■□□□ 1.88
NPC1-205ENST00000587163 PREX2Q70Z35 1606 aa26.82■■□□□ 1.88
NPC1-205ENST00000587163 REREQ9P2R6 1566 aa26.81■■□□□ 1.88
NPC1-205ENST00000587163 ABCC1P33527 1531 aa26.8■■□□□ 1.88
NPC1-205ENST00000587163 CCDC18Q5T9S5 1454 aa26.79■■□□□ 1.88
NPC1-205ENST00000587163 STRCQ7RTU9 1775 aa26.78■■□□□ 1.88
NPC1-205ENST00000587163 ITSN2Q9NZM3 1697 aa26.76■■□□□ 1.87
NPC1-205ENST00000587163 UHRF1BP1Q6BDS2 1440 aa26.75■■□□□ 1.87
NPC1-205ENST00000587163 SETD1BQ9UPS6 1966 aaKnown RBP26.75■■□□□ 1.87
NPC1-205ENST00000587163 AGLP35573 1532 aa26.75■■□□□ 1.87
NPC1-205ENST00000587163 CDC42BPAQ5VT25 1732 aa26.74■■□□□ 1.87
NPC1-205ENST00000587163 C3P01024 1663 aa26.73■■□□□ 1.87
NPC1-205ENST00000587163 KIDINS220Q9ULH0 1771 aa26.72■■□□□ 1.87
NPC1-205ENST00000587163 DMRT2Q9Y5R5 561 aa26.71■■□□□ 1.87
NPC1-205ENST00000587163 ESF1Q9H501 851 aaKnown RBP26.69■■□□□ 1.86
NPC1-205ENST00000587163 ZNF777Q9ULD5 760 aaPredicted RBP26.69■■□□□ 1.86
NPC1-205ENST00000587163 FYCO1Q9BQS8 1478 aa26.68■■□□□ 1.86
NPC1-205ENST00000587163 SAMD9LQ8IVG5 1584 aa26.65■■□□□ 1.86
NPC1-205ENST00000587163 GPATCH8Q9UKJ3 1502 aaKnown RBP26.64■■□□□ 1.85
NPC1-205ENST00000587163 HNRNPMP52272 730 aaKnown RBP eCLIP26.63■■□□□ 1.85
NPC1-205ENST00000587163 SYCP2Q9BX26 1530 aa26.61■■□□□ 1.85
NPC1-205ENST00000587163 PTPRTO14522 1441 aa26.6■■□□□ 1.85
NPC1-205ENST00000587163 CNTLNQ9NXG0 1405 aa26.6■■□□□ 1.85
NPC1-205ENST00000587163 SPAG9O60271 1321 aaKnown RBP26.6■■□□□ 1.85
NPC1-205ENST00000587163 CFDP1Q9UEE9 299 aaPredicted RBP26.55■■□□□ 1.84
NPC1-205ENST00000587163 SUPT6HQ7KZ85 1726 aaKnown RBP26.54■■□□□ 1.84
NPC1-205ENST00000587163 ZMYM3Q14202 1370 aa26.54■■□□□ 1.84
NPC1-205ENST00000587163 NCOA1Q15788 1441 aa26.53■■□□□ 1.84
NPC1-205ENST00000587163 KIAA1107Q9UPP5 1409 aa26.53■■□□□ 1.84
NPC1-205ENST00000587163 MROH2AA6NES4 1674 aa26.52■■□□□ 1.84
NPC1-205ENST00000587163 ATP7AQ04656 1500 aa26.52■■□□□ 1.84
NPC1-205ENST00000587163 CCNB3Q8WWL7 1395 aa26.51■■□□□ 1.83
NPC1-205ENST00000587163 NPATQ14207 1427 aa26.5■■□□□ 1.83
NPC1-205ENST00000587163 LTBP4Q8N2S1 1624 aa26.5■■□□□ 1.83
NPC1-205ENST00000587163 INO80Q9ULG1 1556 aaPredicted RBP26.49■■□□□ 1.83
NPC1-205ENST00000587163 A2MP01023 1474 aa26.48■■□□□ 1.83
NPC1-205ENST00000587163 PLEKHH2Q8IVE3 1493 aa26.48■■□□□ 1.83
NPC1-205ENST00000587163 CAMSAP1Q5T5Y3 1602 aa26.47■■□□□ 1.83
NPC1-205ENST00000587163 PLXNC1O60486 1568 aa26.47■■□□□ 1.83
NPC1-205ENST00000587163 MTUS2Q5JR59 1369 aa26.46■■□□□ 1.83
NPC1-205ENST00000587163 ZNF644Q9H582 1327 aaPredicted RBP26.46■■□□□ 1.83
NPC1-205ENST00000587163 CLTCQ00610 1675 aaKnown RBP26.46■■□□□ 1.83
NPC1-205ENST00000587163 NCKAP5LQ9HCH0 1330 aa26.44■■□□□ 1.82
NPC1-205ENST00000587163 GGT6Q6P531 493 aa26.44■■□□□ 1.82
NPC1-205ENST00000587163 DISP3Q9P2K9 1392 aa26.41■■□□□ 1.82
NPC1-205ENST00000587163 PTPRKQ15262 1439 aa26.4■■□□□ 1.82
NPC1-205ENST00000587163 TIAM1Q13009 1591 aa26.39■■□□□ 1.82
NPC1-205ENST00000587163 ILDR2Q71H61 639 aa26.39■■□□□ 1.82
NPC1-205ENST00000587163 MBD5Q9P267 1494 aa26.38■■□□□ 1.81
NPC1-205ENST00000587163 MYO3AQ8NEV4 1616 aa26.36■■□□□ 1.81
NPC1-205ENST00000587163 IQSEC2Q5JU85 1478 aa26.36■■□□□ 1.81
NPC1-205ENST00000587163 ADGBQ8N7X0 1667 aa26.35■■□□□ 1.81
NPC1-205ENST00000587163 ZNF335Q9H4Z2 1342 aaPredicted RBP26.35■■□□□ 1.81
NPC1-205ENST00000587163 ZNF142P52746 1687 aaPredicted RBP26.34■■□□□ 1.81
NPC1-205ENST00000587163 PPP6R1Q9UPN7 881 aa26.34■■□□□ 1.81
NPC1-205ENST00000587163 CEP170BQ9Y4F5 1589 aaPredicted RBP26.33■■□□□ 1.8
NPC1-205ENST00000587163 EHBP1L1Q8N3D4 1523 aa26.32■■□□□ 1.8
NPC1-205ENST00000587163 PLA2R1Q13018 1463 aa26.31■■□□□ 1.8
NPC1-205ENST00000587163 PKD2Q13563 968 aa26.31■■□□□ 1.8
NPC1-205ENST00000587163 RTEL1-TNFRSF6BF6WH68 1400 aa26.31■■□□□ 1.8
NPC1-205ENST00000587163 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
NPC1-205ENST00000587163 TCOF1Q13428 1488 aaKnown RBP26.3■■□□□ 1.8
NPC1-205ENST00000587163 DHX29Q7Z478 1369 aaKnown RBP26.29■■□□□ 1.8
NPC1-205ENST00000587163 A2ML1A8K2U0 1454 aa26.23■■□□□ 1.79
NPC1-205ENST00000587163 KIF3BO15066 747 aa26.23■■□□□ 1.79
NPC1-205ENST00000587163 FBXO31Q5XUX0 539 aaPredicted RBP26.23■■□□□ 1.79
NPC1-205ENST00000587163 SPATA31D1Q6ZQQ2 1576 aa26.23■■□□□ 1.79
NPC1-205ENST00000587163 DNMT1P26358 1616 aaKnown RBP26.22■■□□□ 1.79
NPC1-205ENST00000587163 UBAP1LF5GYI3 381 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms