RNA–Protein interactions for RNA: ENST00000586800.5

DNMT1-210, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-210ENST00000586800 CFTRP13569 1480 aa9.62□□□□□ -0.87
DNMT1-210ENST00000586800 FANCD2Q9BXW9 1451 aa9.6□□□□□ -0.87
DNMT1-210ENST00000586800 CEP164Q9UPV0 1460 aa9.59□□□□□ -0.87
DNMT1-210ENST00000586800 TIE1P35590 1138 aa9.59□□□□□ -0.87
DNMT1-210ENST00000586800 TTLL13PA6NNM8 815 aa9.58□□□□□ -0.88
DNMT1-210ENST00000586800 MS4A4AQ96JQ5 239 aa9.58□□□□□ -0.88
DNMT1-210ENST00000586800 GALR2O43603 387 aaPredicted RBP9.57□□□□□ -0.88
DNMT1-210ENST00000586800 BMP2KQ9NSY1 1161 aaPredicted RBP9.56□□□□□ -0.88
DNMT1-210ENST00000586800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.55□□□□□ -0.888e-7■□□□□ 10.6
DNMT1-210ENST00000586800 GTF3C3Q9Y5Q9 886 aa9.55□□□□□ -0.88
DNMT1-210ENST00000586800 EVX2Q03828 476 aa9.54□□□□□ -0.88
DNMT1-210ENST00000586800 KCNV2Q8TDN2 545 aa9.54□□□□□ -0.88
DNMT1-210ENST00000586800 CUX2O14529 1486 aa9.53□□□□□ -0.88
DNMT1-210ENST00000586800 MRC2Q9UBG0 1479 aa9.53□□□□□ -0.88
DNMT1-210ENST00000586800 TRIM35Q9UPQ4 493 aa9.53□□□□□ -0.88
DNMT1-210ENST00000586800 TULP1O00294 542 aaPredicted RBP9.51□□□□□ -0.89
DNMT1-210ENST00000586800 TMEM132AQ24JP5 1023 aa9.51□□□□□ -0.89
DNMT1-210ENST00000586800 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.51□□□□□ -0.89
DNMT1-210ENST00000586800 LARP6Q9BRS8 491 aaKnown RBP9.51□□□□□ -0.89
DNMT1-210ENST00000586800 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
DNMT1-210ENST00000586800 PDE4AP27815 886 aa9.5□□□□□ -0.89
DNMT1-210ENST00000586800 ERICH6Q7L0X2 663 aa9.5□□□□□ -0.89
DNMT1-210ENST00000586800 CLCN6P51797 869 aa9.49□□□□□ -0.89
DNMT1-210ENST00000586800 E2F4Q16254 413 aa9.49□□□□□ -0.89
DNMT1-210ENST00000586800 TIMELESSQ9UNS1 1208 aa9.49□□□□□ -0.89
DNMT1-210ENST00000586800 LMOD2Q6P5Q4 547 aa9.48□□□□□ -0.89
DNMT1-210ENST00000586800 NCKAP5LQ9HCH0 1330 aa9.48□□□□□ -0.89
DNMT1-210ENST00000586800 ATN1P54259 1190 aaPredicted RBP9.46□□□□□ -0.9
DNMT1-210ENST00000586800 DPY19L2Q6NUT2 758 aa9.45□□□□□ -0.9
DNMT1-210ENST00000586800 POTEHQ6S545 545 aa9.45□□□□□ -0.9
DNMT1-210ENST00000586800 ARHGEF1Q92888 912 aaKnown RBP9.44□□□□□ -0.9
DNMT1-210ENST00000586800 DDX27Q96GQ7 796 aaKnown RBP9.44□□□□□ -0.9
DNMT1-210ENST00000586800 ATMINO43313 823 aaPredicted RBP9.43□□□□□ -0.9
DNMT1-210ENST00000586800 CRISPLD2Q9H0B8 497 aa9.43□□□□□ -0.9
DNMT1-210ENST00000586800 KIF21AQ7Z4S6 1674 aa9.42□□□□□ -0.9
DNMT1-210ENST00000586800 URB2Q14146 1524 aaKnown RBP9.41□□□□□ -0.9
DNMT1-210ENST00000586800 SOGA1O94964 1423 aa9.41□□□□□ -0.9
DNMT1-210ENST00000586800 ILDR1Q86SU0 546 aaPredicted RBP9.41□□□□□ -0.9
DNMT1-210ENST00000586800 WDR62O43379 1518 aa9.41□□□□□ -0.9
DNMT1-210ENST00000586800 TOPBP1Q92547 1522 aa9.41□□□□□ -0.9
DNMT1-210ENST00000586800 WRNQ14191 1432 aaPredicted RBP eCLIP9.4□□□□□ -0.9
DNMT1-210ENST00000586800 G3V3G9 751 aa9.4□□□□□ -0.9
DNMT1-210ENST00000586800 MFSD10Q14728 455 aa9.4□□□□□ -0.9
DNMT1-210ENST00000586800 GABBR2O75899 941 aa9.39□□□□□ -0.91
DNMT1-210ENST00000586800 ASTLQ6HA08 431 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-210ENST00000586800 IFT140Q96RY7 1462 aa9.39□□□□□ -0.91
DNMT1-210ENST00000586800 THOC2Q8NI27 1593 aaKnown RBP9.38□□□□□ -0.91
DNMT1-210ENST00000586800 MICALL2Q8IY33 904 aa9.38□□□□□ -0.91
DNMT1-210ENST00000586800 OCEL1Q9H607 264 aa9.38□□□□□ -0.91
DNMT1-210ENST00000586800 DNMBPQ6XZF7 1577 aa9.37□□□□□ -0.91
DNMT1-210ENST00000586800 PLCG2P16885 1265 aa9.37□□□□□ -0.91
DNMT1-210ENST00000586800 PDCD7Q8N8D1 485 aaKnown RBP9.37□□□□□ -0.91
DNMT1-210ENST00000586800 DCBLD2Q96PD2 775 aa9.37□□□□□ -0.91
DNMT1-210ENST00000586800 IRX5P78411 483 aaPredicted RBP9.36□□□□□ -0.91
DNMT1-210ENST00000586800 PPP1R15BQ5SWA1 713 aa9.36□□□□□ -0.91
DNMT1-210ENST00000586800 IER5LQ5T953 404 aa9.36□□□□□ -0.91
DNMT1-210ENST00000586800 TMC2Q8TDI7 906 aa9.36□□□□□ -0.91
DNMT1-210ENST00000586800 SEMA3EO15041 775 aa9.35□□□□□ -0.91
DNMT1-210ENST00000586800 HRCP23327 699 aa9.35□□□□□ -0.91
DNMT1-210ENST00000586800 CHMP7Q8WUX9 453 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-210ENST00000586800 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-210ENST00000586800 TDRD9Q8NDG6 1382 aaKnown RBP9.35□□□□□ -0.91
DNMT1-210ENST00000586800 TESPA1A2RU30 521 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-210ENST00000586800 SEC24BO95487 1268 aa9.34□□□□□ -0.91
DNMT1-210ENST00000586800 ZC3H15Q8WU90 426 aaKnown RBP9.34□□□□□ -0.91
DNMT1-210ENST00000586800 BOLA1Q9Y3E2 137 aa9.34□□□□□ -0.91
DNMT1-210ENST00000586800 FGD5Q6ZNL6 1462 aa9.34□□□□□ -0.91
DNMT1-210ENST00000586800 PRDM2Q13029 1718 aa9.34□□□□□ -0.92
DNMT1-210ENST00000586800 BRPF1P55201 1214 aaPredicted RBP9.32□□□□□ -0.92
DNMT1-210ENST00000586800 POLA1P09884 1462 aaPredicted RBP9.32□□□□□ -0.92
DNMT1-210ENST00000586800 CUX1P39880 1505 aa9.31□□□□□ -0.92
DNMT1-210ENST00000586800 CAMK2BQ13554 666 aa9.31□□□□□ -0.92
DNMT1-210ENST00000586800 DSG2Q14126 1118 aa9.31□□□□□ -0.92
DNMT1-210ENST00000586800 RAD54L2Q9Y4B4 1467 aa9.31□□□□□ -0.92
DNMT1-210ENST00000586800 AQRO60306 1485 aaKnown RBP eCLIP9.3□□□□□ -0.925e-13■■■■■ 33.3
DNMT1-210ENST00000586800 L3MBTL3Q96JM7 780 aaPredicted RBP9.3□□□□□ -0.92
DNMT1-210ENST00000586800 SMYD5Q6GMV2 418 aa9.29□□□□□ -0.92
DNMT1-210ENST00000586800 PELP1Q8IZL8 1130 aaKnown RBP9.29□□□□□ -0.92
DNMT1-210ENST00000586800 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
DNMT1-210ENST00000586800 C14orf37Q86TY3 774 aa9.27□□□□□ -0.93
DNMT1-210ENST00000586800 TMEM121BQ9BXQ6 578 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-210ENST00000586800 ZNF608Q9ULD9 1512 aaPredicted RBP9.26□□□□□ -0.93
DNMT1-210ENST00000586800 DPYSL4O14531 572 aa9.26□□□□□ -0.93
DNMT1-210ENST00000586800 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
DNMT1-210ENST00000586800 PLPP6Q8IY26 295 aa9.26□□□□□ -0.93
DNMT1-210ENST00000586800 SLC39A7Q92504 469 aa9.26□□□□□ -0.93
DNMT1-210ENST00000586800 COLQQ9Y215 455 aaPredicted RBP9.26□□□□□ -0.93
DNMT1-210ENST00000586800 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
DNMT1-210ENST00000586800 GAPVD1Q14C86 1478 aa9.26□□□□□ -0.93
DNMT1-210ENST00000586800 KIF27Q86VH2 1401 aa9.25□□□□□ -0.93
DNMT1-210ENST00000586800 FOXK1P85037 733 aa9.25□□□□□ -0.93
DNMT1-210ENST00000586800 SLC24A3Q9HC58 644 aa9.25□□□□□ -0.93
DNMT1-210ENST00000586800 EMILIN3Q9NT22 766 aa9.25□□□□□ -0.93
DNMT1-210ENST00000586800 GRIN2BQ13224 1484 aa9.25□□□□□ -0.93
DNMT1-210ENST00000586800 TOP2BQ02880 1626 aa9.24□□□□□ -0.93
DNMT1-210ENST00000586800 ARXQ96QS3 562 aa9.24□□□□□ -0.93
DNMT1-210ENST00000586800 ABCA10Q8WWZ4 1543 aa9.23□□□□□ -0.93
DNMT1-210ENST00000586800 ZMYND10O75800 440 aa9.22□□□□□ -0.93
DNMT1-210ENST00000586800 C7P10643 843 aa9.22□□□□□ -0.93
DNMT1-210ENST00000586800 FAM9AQ8IZU1 332 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms