RNA–Protein interactions for RNA: ENST00000586751.5

LAMA3-206, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 3,494 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-206ENST00000586751 MPHOSPH9Q99550 1183 aa12.61□□□□□ -0.39
LAMA3-206ENST00000586751 ANO8Q9HCE9 1232 aaPredicted RBP12.6□□□□□ -0.39
LAMA3-206ENST00000586751 ANP32EQ9BTT0 268 aa12.58□□□□□ -0.39
LAMA3-206ENST00000586751 NUP153P49790 1475 aaKnown RBP12.58□□□□□ -0.4
LAMA3-206ENST00000586751 IRX6P78412 446 aaPredicted RBP12.58□□□□□ -0.4
LAMA3-206ENST00000586751 ABCC5O15440 1437 aa12.58□□□□□ -0.4
LAMA3-206ENST00000586751 AKNAQ7Z591 1439 aa12.58□□□□□ -0.4
LAMA3-206ENST00000586751 TEX14Q8IWB6 1497 aa12.57□□□□□ -0.4
LAMA3-206ENST00000586751 DAPK1P53355 1430 aa12.57□□□□□ -0.4
LAMA3-206ENST00000586751 ANKRD30BQ9BXX2 1392 aa12.56□□□□□ -0.4
LAMA3-206ENST00000586751 KIAA0556O60303 1618 aa12.56□□□□□ -0.4
LAMA3-206ENST00000586751 MIA2Q96PC5 1412 aa12.56□□□□□ -0.4
LAMA3-206ENST00000586751 DNMT1P26358 1616 aaKnown RBP12.55□□□□□ -0.4
LAMA3-206ENST00000586751 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
LAMA3-206ENST00000586751 HNRNPUQ00839 825 aaKnown RBP eCLIP12.54□□□□□ -0.4
LAMA3-206ENST00000586751 NCOA1Q15788 1441 aa12.54□□□□□ -0.4
LAMA3-206ENST00000586751 SPATA31E1Q6ZUB1 1445 aa12.53□□□□□ -0.4
LAMA3-206ENST00000586751 RBM19Q9Y4C8 960 aaKnown RBP12.53□□□□□ -0.4
LAMA3-206ENST00000586751 RPRD2Q5VT52 1461 aaKnown RBP12.53□□□□□ -0.4
LAMA3-206ENST00000586751 MRC2Q9UBG0 1479 aa12.52□□□□□ -0.4
LAMA3-206ENST00000586751 CNTLNQ9NXG0 1405 aa12.52□□□□□ -0.4
LAMA3-206ENST00000586751 PZPP20742 1482 aa12.52□□□□□ -0.41
LAMA3-206ENST00000586751 PRG4Q92954 1404 aaPredicted RBP12.52□□□□□ -0.41
LAMA3-206ENST00000586751 CCDC7Q96M83 1385 aa12.51□□□□□ -0.41
LAMA3-206ENST00000586751 KIF14Q15058 1648 aa12.51□□□□□ -0.41
LAMA3-206ENST00000586751 RAPGEF6Q8TEU7 1601 aa12.5□□□□□ -0.41
LAMA3-206ENST00000586751 BCORL1Q5H9F3 1711 aa12.5□□□□□ -0.41
LAMA3-206ENST00000586751 EIF4G2P78344 907 aaKnown RBP eCLIP12.5□□□□□ -0.41
LAMA3-206ENST00000586751 MSH5O43196 834 aa12.49□□□□□ -0.41
LAMA3-206ENST00000586751 PLB1Q6P1J6 1458 aa12.49□□□□□ -0.41
LAMA3-206ENST00000586751 ROCK1Q13464 1354 aa12.49□□□□□ -0.41
LAMA3-206ENST00000586751 PRKRIP1Q9H875 184 aaPredicted RBP12.49□□□□□ -0.41
LAMA3-206ENST00000586751 KIF7Q2M1P5 1343 aa12.48□□□□□ -0.41
LAMA3-206ENST00000586751 EIF4G3O43432 1585 aaKnown RBP12.48□□□□□ -0.41
LAMA3-206ENST00000586751 KIAA0586Q9BVV6 1533 aa12.48□□□□□ -0.41
LAMA3-206ENST00000586751 CEP170Q5SW79 1584 aa12.47□□□□□ -0.41
LAMA3-206ENST00000586751 GRIN2AQ12879 1464 aa12.47□□□□□ -0.41
LAMA3-206ENST00000586751 POLR1AO95602 1720 aaPredicted RBP12.46□□□□□ -0.41
LAMA3-206ENST00000586751 MBD5Q9P267 1494 aa12.46□□□□□ -0.41
LAMA3-206ENST00000586751 CAMSAP2Q08AD1 1489 aa12.46□□□□□ -0.42
LAMA3-206ENST00000586751 GPATCH8Q9UKJ3 1502 aaKnown RBP12.45□□□□□ -0.42
LAMA3-206ENST00000586751 IFT140Q96RY7 1462 aa12.44□□□□□ -0.42
LAMA3-206ENST00000586751 SENP3-EIF4A1A0A087X0R7 540 aa12.44□□□□□ -0.42
LAMA3-206ENST00000586751 NEFLP07196 543 aa12.44□□□□□ -0.42
LAMA3-206ENST00000586751 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
LAMA3-206ENST00000586751 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
LAMA3-206ENST00000586751 CROCC2H7BZ55 1655 aa12.43□□□□□ -0.42
LAMA3-206ENST00000586751 DHX29Q7Z478 1369 aaKnown RBP12.43□□□□□ -0.42
LAMA3-206ENST00000586751 UBE2Q2Q8WVN8 375 aa12.42□□□□□ -0.42
LAMA3-206ENST00000586751 TROQ12816 1431 aaPredicted RBP12.41□□□□□ -0.42
LAMA3-206ENST00000586751 ADGBQ8N7X0 1667 aa12.4□□□□□ -0.42
LAMA3-206ENST00000586751 CNGB1Q14028 1251 aaPredicted RBP12.4□□□□□ -0.42
LAMA3-206ENST00000586751 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.43
LAMA3-206ENST00000586751 ADCY10Q96PN6 1610 aa12.39□□□□□ -0.43
LAMA3-206ENST00000586751 MRS2Q9HD23 443 aa12.39□□□□□ -0.43
LAMA3-206ENST00000586751 KDM5CP41229 1560 aa12.39□□□□□ -0.43
LAMA3-206ENST00000586751 ZNF777Q9ULD5 760 aaPredicted RBP12.38□□□□□ -0.43
LAMA3-206ENST00000586751 ADGRL2O95490 1459 aa12.37□□□□□ -0.43
LAMA3-206ENST00000586751 CCDC136Q96JN2 1154 aa12.37□□□□□ -0.43
LAMA3-206ENST00000586751 CFDP1Q9UEE9 299 aaPredicted RBP12.37□□□□□ -0.43
LAMA3-206ENST00000586751 KIAA1107Q9UPP5 1409 aa12.36□□□□□ -0.43
LAMA3-206ENST00000586751 PKD2Q13563 968 aa12.36□□□□□ -0.43
LAMA3-206ENST00000586751 ITSN2Q9NZM3 1697 aa12.36□□□□□ -0.43
LAMA3-206ENST00000586751 B4GALNT3Q6L9W6 998 aa12.35□□□□□ -0.43
LAMA3-206ENST00000586751 ABCC10Q5T3U5 1492 aa12.35□□□□□ -0.43
LAMA3-206ENST00000586751 ZBED9Q6R2W3 1325 aa12.35□□□□□ -0.43
LAMA3-206ENST00000586751 ZNF326Q5BKZ1 582 aaKnown RBP12.35□□□□□ -0.43
LAMA3-206ENST00000586751 USP47Q96K76 1375 aa12.34□□□□□ -0.43
LAMA3-206ENST00000586751 PKNOX2Q96KN3 472 aa12.34□□□□□ -0.43
LAMA3-206ENST00000586751 ABCA8O94911 1581 aa12.33□□□□□ -0.44
LAMA3-206ENST00000586751 SYNJ2O15056 1496 aa12.32□□□□□ -0.44
LAMA3-206ENST00000586751 ATP10BO94823 1461 aa12.32□□□□□ -0.44
LAMA3-206ENST00000586751 ANKRD50Q9ULJ7 1429 aa12.31□□□□□ -0.44
LAMA3-206ENST00000586751 FBLN2P98095 1184 aa12.31□□□□□ -0.44
LAMA3-206ENST00000586751 NUP160Q12769 1436 aa12.31□□□□□ -0.44
LAMA3-206ENST00000586751 MAGI1Q96QZ7 1491 aaPredicted RBP12.3□□□□□ -0.44
LAMA3-206ENST00000586751 JPH4Q96JJ6 628 aa12.3□□□□□ -0.44
LAMA3-206ENST00000586751 CHMP7Q8WUX9 453 aaPredicted RBP12.3□□□□□ -0.44
LAMA3-206ENST00000586751 POLR3GLQ9BT43 218 aa12.3□□□□□ -0.44
LAMA3-206ENST00000586751 UHRF1BP1Q6BDS2 1440 aa12.29□□□□□ -0.44
LAMA3-206ENST00000586751 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
LAMA3-206ENST00000586751 C9orf84Q5VXU9 1444 aa12.28□□□□□ -0.44
LAMA3-206ENST00000586751 CDK11AQ9UQ88 783 aaPredicted RBP12.28□□□□□ -0.44
LAMA3-206ENST00000586751 HNRNPMP52272 730 aaKnown RBP eCLIP12.28□□□□□ -0.44
LAMA3-206ENST00000586751 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.44
LAMA3-206ENST00000586751 NUP155O75694 1391 aa12.27□□□□□ -0.44
LAMA3-206ENST00000586751 ANKRD30AQ9BXX3 1397 aa12.27□□□□□ -0.45
LAMA3-206ENST00000586751 E9PCH4 1651 aa12.26□□□□□ -0.45
LAMA3-206ENST00000586751 CDC42BPBQ9Y5S2 1711 aa12.26□□□□□ -0.45
LAMA3-206ENST00000586751 AEBP2Q6ZN18 517 aaPredicted RBP12.26□□□□□ -0.45
LAMA3-206ENST00000586751 PNISRQ8TF01 805 aaKnown RBP12.26□□□□□ -0.45
LAMA3-206ENST00000586751 FANCIQ9NVI1 1328 aa12.26□□□□□ -0.45
LAMA3-206ENST00000586751 KDM5DQ9BY66 1539 aa12.26□□□□□ -0.45
LAMA3-206ENST00000586751 PTPRGP23470 1445 aa12.25□□□□□ -0.45
LAMA3-206ENST00000586751 SMG6Q86US8 1419 aaKnown RBP12.25□□□□□ -0.45
LAMA3-206ENST00000586751 SAMD9LQ8IVG5 1584 aa12.25□□□□□ -0.45
LAMA3-206ENST00000586751 ST20-MTHFSA0A0A6YYL1 179 aa12.25□□□□□ -0.45
LAMA3-206ENST00000586751 KDM2AQ9Y2K7 1162 aa12.25□□□□□ -0.45
LAMA3-206ENST00000586751 RNF123Q5XPI4 1314 aa12.24□□□□□ -0.45
LAMA3-206ENST00000586751 SHANK2Q9UPX8 1470 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms