RNA–Protein interactions for RNA: ENST00000585735.1

GHDC-205, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 940 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-205ENST00000585735 CASKIN1Q8WXD9 1431 aa31.82■■■□□ 2.68
GHDC-205ENST00000585735 DISP3Q9P2K9 1392 aa31.81■■■□□ 2.68
GHDC-205ENST00000585735 FANCAO15360 1455 aa31.81■■■□□ 2.68
GHDC-205ENST00000585735 AKNAQ7Z591 1439 aa31.81■■■□□ 2.68
GHDC-205ENST00000585735 FER1L4A9Z1Z3 1794 aa31.81■■■□□ 2.68
GHDC-205ENST00000585735 FYCO1Q9BQS8 1478 aa31.78■■■□□ 2.68
GHDC-205ENST00000585735 ZMYM4Q5VZL5 1548 aa31.77■■■□□ 2.68
GHDC-205ENST00000585735 NUP153P49790 1475 aaKnown RBP31.76■■■□□ 2.67
GHDC-205ENST00000585735 CFAP74Q9C0B2 1584 aa31.76■■■□□ 2.67
GHDC-205ENST00000585735 MAP3K1Q13233 1512 aa31.75■■■□□ 2.67
GHDC-205ENST00000585735 TTC37Q6PGP7 1564 aa31.74■■■□□ 2.67
GHDC-205ENST00000585735 YEATS2Q9ULM3 1422 aa31.74■■■□□ 2.67
GHDC-205ENST00000585735 ZFYVE16Q7Z3T8 1539 aa31.73■■■□□ 2.67
GHDC-205ENST00000585735 PCGF6Q9BYE7 350 aa31.72■■■□□ 2.67
GHDC-205ENST00000585735 PREX1Q8TCU6 1659 aa31.7■■■□□ 2.67
GHDC-205ENST00000585735 STRCQ7RTU9 1775 aa31.69■■■□□ 2.66
GHDC-205ENST00000585735 MLECQ14165 292 aa31.69■■■□□ 2.66
GHDC-205ENST00000585735 ATP1B4Q9UN42 357 aaPredicted RBP31.68■■■□□ 2.66
GHDC-205ENST00000585735 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.68■■■□□ 2.66
GHDC-205ENST00000585735 MAGI2Q86UL8 1455 aa31.67■■■□□ 2.66
GHDC-205ENST00000585735 TIAM1Q13009 1591 aa31.67■■■□□ 2.66
GHDC-205ENST00000585735 PLEKHD1A6NEE1 506 aa31.66■■■□□ 2.66
GHDC-205ENST00000585735 HECW1Q76N89 1606 aa31.66■■■□□ 2.66
GHDC-205ENST00000585735 KANK4Q5T7N3 995 aaPredicted RBP31.62■■■□□ 2.65
GHDC-205ENST00000585735 SETD1BQ9UPS6 1966 aaKnown RBP31.61■■■□□ 2.65
GHDC-205ENST00000585735 ARHGEF12Q9NZN5 1544 aa31.6■■■□□ 2.65
GHDC-205ENST00000585735 SPATA31D1Q6ZQQ2 1576 aa31.56■■■□□ 2.64
GHDC-205ENST00000585735 DMRT2Q9Y5R5 561 aa31.56■■■□□ 2.64
GHDC-205ENST00000585735 CEBPAP49715 358 aaPredicted RBP31.54■■■□□ 2.64
GHDC-205ENST00000585735 LRRC9Q6ZRR7 1453 aa31.53■■■□□ 2.64
GHDC-205ENST00000585735 ATP10AO60312 1499 aa31.52■■■□□ 2.64
GHDC-205ENST00000585735 CCDC18Q5T9S5 1454 aa31.52■■■□□ 2.64
GHDC-205ENST00000585735 SCAPERQ9BY12 1400 aa31.51■■■□□ 2.64
GHDC-205ENST00000585735 LRRIQ1Q96JM4 1722 aa31.48■■■□□ 2.63
GHDC-205ENST00000585735 C9orf84Q5VXU9 1444 aa31.46■■■□□ 2.63
GHDC-205ENST00000585735 PLCH2O75038 1416 aa31.44■■■□□ 2.62
GHDC-205ENST00000585735 UHRF1BP1Q6BDS2 1440 aa31.41■■■□□ 2.62
GHDC-205ENST00000585735 PTPRTO14522 1441 aa31.4■■■□□ 2.62
GHDC-205ENST00000585735 CDK13Q14004 1512 aaKnown RBP31.37■■■□□ 2.61
GHDC-205ENST00000585735 LTBP4Q8N2S1 1624 aa31.37■■■□□ 2.61
GHDC-205ENST00000585735 MYO5CQ9NQX4 1742 aa31.37■■■□□ 2.61
GHDC-205ENST00000585735 MTUS2Q5JR59 1369 aa31.36■■■□□ 2.61
GHDC-205ENST00000585735 C3P01024 1663 aa31.34■■■□□ 2.61
GHDC-205ENST00000585735 EHBP1L1Q8N3D4 1523 aa31.32■■■□□ 2.6
GHDC-205ENST00000585735 EFCAB2Q5VUJ9 269 aa31.3■■■□□ 2.6
GHDC-205ENST00000585735 IQSEC2Q5JU85 1478 aa31.28■■■□□ 2.6
GHDC-205ENST00000585735 ZNF518AQ6AHZ1 1483 aa31.26■■■□□ 2.59
GHDC-205ENST00000585735 KDM5CP41229 1560 aa31.26■■■□□ 2.59
GHDC-205ENST00000585735 RRBP1Q9P2E9 1410 aaKnown RBP31.24■■■□□ 2.59
GHDC-205ENST00000585735 CDK11AQ9UQ88 783 aaPredicted RBP31.24■■■□□ 2.59
GHDC-205ENST00000585735 DIP2CQ9Y2E4 1556 aa31.24■■■□□ 2.59
GHDC-205ENST00000585735 AFAP1Q8N556 730 aa31.23■■■□□ 2.59
GHDC-205ENST00000585735 REREQ9P2R6 1566 aa31.22■■■□□ 2.59
GHDC-205ENST00000585735 SUPT6HQ7KZ85 1726 aaKnown RBP31.21■■■□□ 2.59
GHDC-205ENST00000585735 KIF14Q15058 1648 aa31.18■■■□□ 2.58
GHDC-205ENST00000585735 NCOA2Q15596 1464 aa31.18■■■□□ 2.58
GHDC-205ENST00000585735 ABCA6Q8N139 1617 aa31.17■■■□□ 2.58
GHDC-205ENST00000585735 TRAPPC8Q9Y2L5 1435 aa31.17■■■□□ 2.58
GHDC-205ENST00000585735 CCNB3Q8WWL7 1395 aa31.17■■■□□ 2.58
GHDC-205ENST00000585735 NCOA1Q15788 1441 aa31.16■■■□□ 2.58
GHDC-205ENST00000585735 MYT1LQ9UL68 1186 aa31.14■■■□□ 2.58
GHDC-205ENST00000585735 ARHGAP5Q13017 1502 aa31.13■■■□□ 2.57
GHDC-205ENST00000585735 TROQ12816 1431 aaPredicted RBP31.12■■■□□ 2.57
GHDC-205ENST00000585735 AGLP35573 1532 aa31.11■■■□□ 2.57
GHDC-205ENST00000585735 CDC42BPBQ9Y5S2 1711 aa31.11■■■□□ 2.57
GHDC-205ENST00000585735 MLH3Q9UHC1 1453 aa31.1■■■□□ 2.57
GHDC-205ENST00000585735 ESF1Q9H501 851 aaKnown RBP31.08■■■□□ 2.57
GHDC-205ENST00000585735 CAMSAP1Q5T5Y3 1602 aa31.07■■■□□ 2.56
GHDC-205ENST00000585735 MYOM3Q5VTT5 1437 aa31.06■■■□□ 2.56
GHDC-205ENST00000585735 FGD6Q6ZV73 1430 aa31.03■■■□□ 2.56
GHDC-205ENST00000585735 CNTLNQ9NXG0 1405 aa31.01■■■□□ 2.55
GHDC-205ENST00000585735 UBAP1LF5GYI3 381 aa31.01■■■□□ 2.55
GHDC-205ENST00000585735 KIDINS220Q9ULH0 1771 aa31.01■■■□□ 2.55
GHDC-205ENST00000585735 MROH2AA6NES4 1674 aa31■■■□□ 2.55
GHDC-205ENST00000585735 ZNF335Q9H4Z2 1342 aaPredicted RBP30.99■■■□□ 2.55
GHDC-205ENST00000585735 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.99■■■□□ 2.55
GHDC-205ENST00000585735 ITSN2Q9NZM3 1697 aa30.99■■■□□ 2.55
GHDC-205ENST00000585735 NCKAP5LQ9HCH0 1330 aa30.98■■■□□ 2.55
GHDC-205ENST00000585735 FAM50AQ14320 339 aaKnown RBP30.96■■■□□ 2.55
GHDC-205ENST00000585735 NPATQ14207 1427 aa30.96■■■□□ 2.55
GHDC-205ENST00000585735 ABCC1P33527 1531 aa30.94■■■□□ 2.54
GHDC-205ENST00000585735 PREX2Q70Z35 1606 aa30.93■■■□□ 2.54
GHDC-205ENST00000585735 MIA2Q96PC5 1412 aa30.92■■■□□ 2.54
GHDC-205ENST00000585735 ZNF142P52746 1687 aaPredicted RBP30.89■■■□□ 2.54
GHDC-205ENST00000585735 ZMYM3Q14202 1370 aa30.89■■■□□ 2.54
GHDC-205ENST00000585735 PTPN23Q9H3S7 1636 aa30.87■■■□□ 2.53
GHDC-205ENST00000585735 TCOF1Q13428 1488 aaKnown RBP30.86■■■□□ 2.53
GHDC-205ENST00000585735 MYO3AQ8NEV4 1616 aa30.84■■■□□ 2.53
GHDC-205ENST00000585735 PLA2R1Q13018 1463 aa30.84■■■□□ 2.53
GHDC-205ENST00000585735 ITGAEP38570 1179 aa30.84■■■□□ 2.53
GHDC-205ENST00000585735 PKD2Q13563 968 aa30.84■■■□□ 2.53
GHDC-205ENST00000585735 CDC42BPAQ5VT25 1732 aa30.84■■■□□ 2.53
GHDC-205ENST00000585735 CLTCQ00610 1675 aaKnown RBP30.84■■■□□ 2.53
GHDC-205ENST00000585735 MED1Q15648 1581 aaPredicted RBP30.83■■■□□ 2.53
GHDC-205ENST00000585735 GPATCH8Q9UKJ3 1502 aaKnown RBP30.82■■■□□ 2.52
GHDC-205ENST00000585735 SAMD9LQ8IVG5 1584 aa30.79■■■□□ 2.52
GHDC-205ENST00000585735 CEP170BQ9Y4F5 1589 aaPredicted RBP30.79■■■□□ 2.52
GHDC-205ENST00000585735 HSPA1LP34931 641 aa30.77■■■□□ 2.52
GHDC-205ENST00000585735 CFDP1Q9UEE9 299 aaPredicted RBP30.75■■■□□ 2.51
GHDC-205ENST00000585735 PTPRKQ15262 1439 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms